BLASTX nr result

ID: Glycyrrhiza23_contig00026723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026723
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containi...   168   4e-40
emb|CBI28722.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37
ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
ref|XP_002524751.1| pentatricopeptide repeat-containing protein,...   157   6e-37

>ref|XP_004146992.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Cucumis sativus]
           gi|449503826|ref|XP_004162196.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Cucumis sativus]
          Length = 796

 Score =  168 bits (426), Expect = 4e-40
 Identities = 81/98 (82%), Positives = 88/98 (89%)
 Frame = -3

Query: 294 QKYSGMPAKSGAEMDEAALTTKLLQEIKEGQKVDYGVHDWNNIIHFFCKKRLMQDAEKAL 115
           Q++  +  KS AE DEA L  KLLQEIK+GQ+VDYG+HDWNN+IHFFCKKRLMQDAEKAL
Sbjct: 607 QEFRRLVEKS-AENDEAGLMAKLLQEIKDGQRVDYGLHDWNNVIHFFCKKRLMQDAEKAL 665

Query: 114 KKMRSLGHSPNAQTFHSMVTGYAAIGGKYVEVTELWGE 1
           KKMRSLGH PNAQTFHSMVTGYAAIGGKYVEVTELWGE
Sbjct: 666 KKMRSLGHCPNAQTFHSMVTGYAAIGGKYVEVTELWGE 703


>emb|CBI28722.3| unnamed protein product [Vitis vinifera]
          Length = 1361

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/93 (82%), Positives = 81/93 (87%)
 Frame = -3

Query: 279  MPAKSGAEMDEAALTTKLLQEIKEGQKVDYGVHDWNNIIHFFCKKRLMQDAEKALKKMRS 100
            M  K  AE  EA L  KLL EIKE Q+VD GVHDWNN+IHFFC+KRLMQDAEKALKKMRS
Sbjct: 1176 MLVKGCAESGEAGLMAKLLHEIKEEQRVDCGVHDWNNVIHFFCRKRLMQDAEKALKKMRS 1235

Query: 99   LGHSPNAQTFHSMVTGYAAIGGKYVEVTELWGE 1
            LGH+PNAQTFHSMVTGYAAIGGKYVEVTELWGE
Sbjct: 1236 LGHAPNAQTFHSMVTGYAAIGGKYVEVTELWGE 1268


>ref|XP_003632339.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03100,
           mitochondrial-like [Vitis vinifera]
          Length = 784

 Score =  160 bits (405), Expect = 1e-37
 Identities = 77/93 (82%), Positives = 81/93 (87%)
 Frame = -3

Query: 279 MPAKSGAEMDEAALTTKLLQEIKEGQKVDYGVHDWNNIIHFFCKKRLMQDAEKALKKMRS 100
           M  K  AE  EA L  KLL EIKE Q+VD GVHDWNN+IHFFC+KRLMQDAEKALKKMRS
Sbjct: 599 MLVKGCAESGEAGLMAKLLHEIKEEQRVDCGVHDWNNVIHFFCRKRLMQDAEKALKKMRS 658

Query: 99  LGHSPNAQTFHSMVTGYAAIGGKYVEVTELWGE 1
           LGH+PNAQTFHSMVTGYAAIGGKYVEVTELWGE
Sbjct: 659 LGHAPNAQTFHSMVTGYAAIGGKYVEVTELWGE 691


>ref|XP_002306785.1| predicted protein [Populus trichocarpa] gi|222856234|gb|EEE93781.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score =  159 bits (403), Expect = 2e-37
 Identities = 77/93 (82%), Positives = 80/93 (86%)
 Frame = -3

Query: 279 MPAKSGAEMDEAALTTKLLQEIKEGQKVDYGVHDWNNIIHFFCKKRLMQDAEKALKKMRS 100
           M  K  AE  EA L  KLLQEIKE Q  D GVHDWNN+IHFFCKKRLMQDAEKALKKMRS
Sbjct: 565 MLVKGCAEGGEAGLMAKLLQEIKEEQAADSGVHDWNNVIHFFCKKRLMQDAEKALKKMRS 624

Query: 99  LGHSPNAQTFHSMVTGYAAIGGKYVEVTELWGE 1
           LGH+PNAQTFHSMVTGYAAIGGKY+EVTELWGE
Sbjct: 625 LGHAPNAQTFHSMVTGYAAIGGKYIEVTELWGE 657


>ref|XP_002524751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535935|gb|EEF37594.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 787

 Score =  157 bits (398), Expect = 6e-37
 Identities = 76/93 (81%), Positives = 81/93 (87%)
 Frame = -3

Query: 279 MPAKSGAEMDEAALTTKLLQEIKEGQKVDYGVHDWNNIIHFFCKKRLMQDAEKALKKMRS 100
           M  K  A+  EA L  KLL+EI+EGQ VD GVHDWN +IHFFCKKRLMQDAEKALKKMRS
Sbjct: 602 MLVKGCADDGEAGLLAKLLREIREGQTVDSGVHDWNYVIHFFCKKRLMQDAEKALKKMRS 661

Query: 99  LGHSPNAQTFHSMVTGYAAIGGKYVEVTELWGE 1
           LGH+PNAQTFHSMVTGYAAIGGKYVEVTELWGE
Sbjct: 662 LGHAPNAQTFHSMVTGYAAIGGKYVEVTELWGE 694


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