BLASTX nr result

ID: Glycyrrhiza23_contig00026682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026682
         (725 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM53246.1|AF507914_1 actin-related protein 6 [Arabidopsis th...   168   8e-69
ref|NP_566861.1| actin-related protein 6 [Arabidopsis thaliana] ...   168   8e-69
gb|AAK92721.1| putative actin protein [Arabidopsis thaliana]          168   4e-68
ref|XP_003522641.1| PREDICTED: actin-related protein 6-like isof...   200   3e-49
ref|XP_003522640.1| PREDICTED: actin-related protein 6-like isof...   200   3e-49

>gb|AAM53246.1|AF507914_1 actin-related protein 6 [Arabidopsis thaliana]
          Length = 422

 Score =  168 bits (426), Expect(2) = 8e-69
 Identities = 80/113 (70%), Positives = 93/113 (82%)
 Frame = +3

Query: 387 LPSSPSTMIAERPQDRKTVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLAECIVRAV 566
           L    S ++ ++  +RK  D+ KNE DLTNERFLVPE +F+PADLGMNQAGLAECIVRA+
Sbjct: 269 LSEKESVVVMDKVGERKKADMNKNEIDLTNERFLVPETLFQPADLGMNQAGLAECIVRAI 328

Query: 567 NSCHPHLHPVLYESIILTGGSTLFPHFAERLEKELRPLVPDNYHVKITTQEDP 725
           NSCH +L PVLY+SIILTGGSTLFP   ERLE ELRPLVPD++ VKITTQEDP
Sbjct: 329 NSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDP 381



 Score =  118 bits (296), Expect(2) = 8e-69
 Identities = 57/88 (64%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   LGGKALTNYLKELVSFRSLSVMDETFLIDDVKEKLCFVSLDLPQHLHIARKSGKENVLRC 180
           LGGKA TNYLKELVS+RS++VMDETFL+DD KEKLCFVSLDL + L +AR      +++ 
Sbjct: 185 LGGKAFTNYLKELVSYRSINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNG--NTLIKS 242

Query: 181 TYVLPDGVTYTKGFVKYPEQVRRYLALT 264
           TYVLPDGVT+TKG+VK P+  +R+L+L+
Sbjct: 243 TYVLPDGVTHTKGYVKDPQAAKRFLSLS 270


>ref|NP_566861.1| actin-related protein 6 [Arabidopsis thaliana]
           gi|75301409|sp|Q8LGE3.1|ARP6_ARATH RecName:
           Full=Actin-related protein 6; AltName: Full=Protein
           EARLY IN SHORT DAYS 1; AltName: Full=Protein SUPPRESSOR
           OF FRIGIDA 3 gi|21489924|tpg|DAA00030.1| TPA_exp:
           actin-related protein 6; AtARP6 [Arabidopsis thaliana]
           gi|21536575|gb|AAM60907.1| putative actin [Arabidopsis
           thaliana] gi|23297435|gb|AAN12968.1| putative actin
           [Arabidopsis thaliana] gi|332644195|gb|AEE77716.1|
           actin-related protein 6 [Arabidopsis thaliana]
          Length = 421

 Score =  168 bits (426), Expect(2) = 8e-69
 Identities = 80/113 (70%), Positives = 93/113 (82%)
 Frame = +3

Query: 387 LPSSPSTMIAERPQDRKTVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLAECIVRAV 566
           L    S ++ ++  +RK  D+ KNE DLTNERFLVPE +F+PADLGMNQAGLAECIVRA+
Sbjct: 268 LSEKESVVVMDKVGERKKADMNKNEIDLTNERFLVPETLFQPADLGMNQAGLAECIVRAI 327

Query: 567 NSCHPHLHPVLYESIILTGGSTLFPHFAERLEKELRPLVPDNYHVKITTQEDP 725
           NSCH +L PVLY+SIILTGGSTLFP   ERLE ELRPLVPD++ VKITTQEDP
Sbjct: 328 NSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDP 380



 Score =  118 bits (296), Expect(2) = 8e-69
 Identities = 57/88 (64%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   LGGKALTNYLKELVSFRSLSVMDETFLIDDVKEKLCFVSLDLPQHLHIARKSGKENVLRC 180
           LGGKA TNYLKELVS+RS++VMDETFL+DD KEKLCFVSLDL + L +AR      +++ 
Sbjct: 184 LGGKAFTNYLKELVSYRSINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNG--NTLIKS 241

Query: 181 TYVLPDGVTYTKGFVKYPEQVRRYLALT 264
           TYVLPDGVT+TKG+VK P+  +R+L+L+
Sbjct: 242 TYVLPDGVTHTKGYVKDPQAAKRFLSLS 269


>gb|AAK92721.1| putative actin protein [Arabidopsis thaliana]
          Length = 421

 Score =  168 bits (426), Expect(2) = 4e-68
 Identities = 80/113 (70%), Positives = 93/113 (82%)
 Frame = +3

Query: 387 LPSSPSTMIAERPQDRKTVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLAECIVRAV 566
           L    S ++ ++  +RK  D+ KNE DLTNERFLVPE +F+PADLGMNQAGLAECIVRA+
Sbjct: 268 LSEKESVVVMDKVGERKKADMNKNEIDLTNERFLVPETLFQPADLGMNQAGLAECIVRAI 327

Query: 567 NSCHPHLHPVLYESIILTGGSTLFPHFAERLEKELRPLVPDNYHVKITTQEDP 725
           NSCH +L PVLY+SIILTGGSTLFP   ERLE ELRPLVPD++ VKITTQEDP
Sbjct: 328 NSCHSYLQPVLYQSIILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDP 380



 Score =  116 bits (290), Expect(2) = 4e-68
 Identities = 56/88 (63%), Positives = 72/88 (81%)
 Frame = +1

Query: 1   LGGKALTNYLKELVSFRSLSVMDETFLIDDVKEKLCFVSLDLPQHLHIARKSGKENVLRC 180
           LGGKA TNYLKELVS+RS++VMDETFL+DD KEKLCFVSLDL + L +AR      +++ 
Sbjct: 184 LGGKAFTNYLKELVSYRSINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNG--NTLIKS 241

Query: 181 TYVLPDGVTYTKGFVKYPEQVRRYLALT 264
           TYVLPDGV +TKG+VK P+  +R+L+L+
Sbjct: 242 TYVLPDGVIHTKGYVKDPQAAKRFLSLS 269


>ref|XP_003522641.1| PREDICTED: actin-related protein 6-like isoform 2 [Glycine max]
          Length = 434

 Score =  200 bits (508), Expect = 3e-49
 Identities = 97/107 (90%), Positives = 101/107 (94%)
 Frame = +3

Query: 405 TMIAERPQDRKTVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLAECIVRAVNSCHPH 584
           T IAE P++RK VDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLAECIVRAVN+CHPH
Sbjct: 287 TEIAEHPENRKRVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLAECIVRAVNACHPH 346

Query: 585 LHPVLYESIILTGGSTLFPHFAERLEKELRPLVPDNYHVKITTQEDP 725
           L PVLYESIILTGGSTLFP FAERLEKELRPLVPD+Y VKITTQEDP
Sbjct: 347 LRPVLYESIILTGGSTLFPQFAERLEKELRPLVPDDYRVKITTQEDP 393



 Score =  136 bits (342), Expect = 5e-30
 Identities = 67/87 (77%), Positives = 77/87 (88%)
 Frame = +1

Query: 1   LGGKALTNYLKELVSFRSLSVMDETFLIDDVKEKLCFVSLDLPQHLHIARKSGKENVLRC 180
           LGGKALTNYLKELVSFRS++VM+ETF+IDDVKEKLCFVSLD+ + L IAR+      +RC
Sbjct: 183 LGGKALTNYLKELVSFRSVNVMEETFIIDDVKEKLCFVSLDVNRDLTIARRGNSR--IRC 240

Query: 181 TYVLPDGVTYTKGFVKYPEQVRRYLAL 261
           TYVLPDGVTYTKGFVKYP+Q +RYLAL
Sbjct: 241 TYVLPDGVTYTKGFVKYPDQAQRYLAL 267


>ref|XP_003522640.1| PREDICTED: actin-related protein 6-like isoform 1 [Glycine max]
          Length = 436

 Score =  200 bits (508), Expect = 3e-49
 Identities = 97/107 (90%), Positives = 101/107 (94%)
 Frame = +3

Query: 405 TMIAERPQDRKTVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLAECIVRAVNSCHPH 584
           T IAE P++RK VDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLAECIVRAVN+CHPH
Sbjct: 289 TEIAEHPENRKRVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLAECIVRAVNACHPH 348

Query: 585 LHPVLYESIILTGGSTLFPHFAERLEKELRPLVPDNYHVKITTQEDP 725
           L PVLYESIILTGGSTLFP FAERLEKELRPLVPD+Y VKITTQEDP
Sbjct: 349 LRPVLYESIILTGGSTLFPQFAERLEKELRPLVPDDYRVKITTQEDP 395



 Score =  152 bits (383), Expect = 9e-35
 Identities = 73/87 (83%), Positives = 82/87 (94%)
 Frame = +1

Query: 1   LGGKALTNYLKELVSFRSLSVMDETFLIDDVKEKLCFVSLDLPQHLHIARKSGKENVLRC 180
           LGGKALTNYLKELVSFRS++VM+ETF+IDDVKEKLCFVSLD+ + L IARKSGKEN+ RC
Sbjct: 183 LGGKALTNYLKELVSFRSVNVMEETFIIDDVKEKLCFVSLDVNRDLTIARKSGKENLFRC 242

Query: 181 TYVLPDGVTYTKGFVKYPEQVRRYLAL 261
           TYVLPDGVTYTKGFVKYP+Q +RYLAL
Sbjct: 243 TYVLPDGVTYTKGFVKYPDQAQRYLAL 269


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