BLASTX nr result

ID: Glycyrrhiza23_contig00026666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026666
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516414.1| PREDICTED: uncharacterized protein LOC100814...   276   5e-72
ref|XP_003551590.1| PREDICTED: protein SCAR2-like [Glycine max]       173   4e-41
ref|XP_003623483.1| Protein SCAR2 [Medicago truncatula] gi|35549...   127   2e-27
ref|XP_002323646.1| predicted protein [Populus trichocarpa] gi|2...    63   8e-08

>ref|XP_003516414.1| PREDICTED: uncharacterized protein LOC100814240 [Glycine max]
          Length = 1694

 Score =  276 bits (705), Expect = 5e-72
 Identities = 162/260 (62%), Positives = 179/260 (68%), Gaps = 1/260 (0%)
 Frame = +1

Query: 10   PVTLPAGTQSDEILSDTAEHNLRLDDD-ADRTGLVGSIDSKPNSPSLIKDDACHVDSSDK 186
            PV LPA TQSDE  S  AE NLRLDDD ADRTGLV SI SKP S SL  DDA  V SS K
Sbjct: 615  PVILPAATQSDETPSAPAELNLRLDDDNADRTGLVESISSKPVSLSLT-DDAHPVGSSAK 673

Query: 187  ISFDNLVDDDAHIQSDDSLQVSNDLELAHEDECCDHSEIKMFQAESHKENSSEISICRDI 366
             S DNL DDD +I  DD LQV NDLELAH DEC DHSEIKM QAE  KEN S+I + RDI
Sbjct: 674  TSLDNLDDDDPYIHCDDLLQVLNDLELAHGDECSDHSEIKMSQAEPPKENPSKILVNRDI 733

Query: 367  GSQGEDSVFPSMEELDLNSGINQMLDCRGSKDEDCISARHLSLEDLSPVVKAPPVSCFNG 546
            GS  ED V PSMEEL+LNSG     DC+ SKDEDC     L+ E  +PV    P+SCF G
Sbjct: 734  GSPVEDPVSPSMEELNLNSGATLAHDCQDSKDEDCTVTTQLNSE--TPV---SPLSCFTG 788

Query: 547  EISSGLIHSNPQDEPGSTEIEIPFSDVPSNYEDIQKLVHGDEINGSTCTVDPVEGGGHFK 726
             + S   H+N QDEPGS EIE+  SD+ S   +I K+VH DEINGST +V+PVE  GHFK
Sbjct: 789  GLLSDSTHNNTQDEPGSAEIEVSSSDLQSKVGEIPKMVHDDEINGSTFSVNPVEDDGHFK 848

Query: 727  HPSSPDKHVMANGVVTEIVQ 786
              SSPD HVM N +VTE VQ
Sbjct: 849  R-SSPDNHVMVNDLVTENVQ 867


>ref|XP_003551590.1| PREDICTED: protein SCAR2-like [Glycine max]
          Length = 1323

 Score =  173 bits (438), Expect = 4e-41
 Identities = 108/247 (43%), Positives = 147/247 (59%), Gaps = 2/247 (0%)
 Frame = +1

Query: 4    ATPVTLPAGT--QSDEILSDTAEHNLRLDDDADRTGLVGSIDSKPNSPSLIKDDACHVDS 177
            A+PV+L AGT  QSDE  S   E +LR++DD ++  LV SI ++ ++   I+DDA  V S
Sbjct: 574  ASPVSLSAGTGRQSDETPSGPVELHLRIEDDEEKKCLVESIVARSDACYPIRDDAFPVVS 633

Query: 178  SDKISFDNLVDDDAHIQSDDSLQVSNDLELAHEDECCDHSEIKMFQAESHKENSSEISIC 357
             D  S +NL   D ++ S+D LQ SN+L LAHE E   HS I++FQAES  E SSEI + 
Sbjct: 634  FDNNSLNNLDVCDPYVHSNDLLQTSNELNLAHEGESGGHSGIEVFQAESLNECSSEILVS 693

Query: 358  RDIGSQGEDSVFPSMEELDLNSGINQMLDCRGSKDEDCISARHLSLEDLSPVVKAPPVSC 537
             D+G QGED + PSM E+DLN     +LD +  K ED I A  L+ EDL PV +    S 
Sbjct: 694  GDVGLQGEDPICPSM-EVDLNPDTKLLLDVQNLKSEDDIIATQLNSEDLFPVAETTSKSS 752

Query: 538  FNGEISSGLIHSNPQDEPGSTEIEIPFSDVPSNYEDIQKLVHGDEINGSTCTVDPVEGGG 717
               E+       N   +P   E+E    D   N+E++ +++ GDEI+GSTC++D VE   
Sbjct: 753  ITQELCFDFTSGN---KPDLAEVEFLPPDHQVNFEEVPRILPGDEISGSTCSLDLVEDDV 809

Query: 718  HFKHPSS 738
            H KH SS
Sbjct: 810  HIKHSSS 816


>ref|XP_003623483.1| Protein SCAR2 [Medicago truncatula] gi|355498498|gb|AES79701.1|
            Protein SCAR2 [Medicago truncatula]
          Length = 1495

 Score =  127 bits (320), Expect = 2e-27
 Identities = 93/263 (35%), Positives = 129/263 (49%), Gaps = 7/263 (2%)
 Frame = +1

Query: 19   LPAGTQSDEILSDTAEHNLRLDDDADRTGLVGSIDSKPNSPSLIKDDACHVDSSDK-ISF 195
            LP   +S +   +   H     DDA   G   S     +S +   D  C + S D   + 
Sbjct: 522  LPHTVESQKTCDEFFSHY----DDAHDNGRAISDSGSVSSGTCPVDSGCLLLSLDHGATA 577

Query: 196  DNLVDDDAHIQSDDSLQVSNDLELAHEDECCDHSEIKMFQAESHKENSSEISICRDIGSQ 375
             +L       QSD++  V+N            HS I++ Q ES  E+ SEIS+  DIGS+
Sbjct: 578  TSLAALPTKTQSDETPHVAN------------HSNIEVMQTESLNEDCSEISVVGDIGSR 625

Query: 376  GEDSVFPSMEELDLNSGINQMLDCRGSK-DEDCISARHLSLEDLSPVVKAPPVSCFNGEI 552
             E+ +   ME +DLN G   +LD R  K D D   A  L  ED  PV++    + F  E+
Sbjct: 626  EENPICLPME-VDLNLGTKLLLDDRDFKSDNDNNKAMQLDSEDSFPVLETNVETSFTEEL 684

Query: 553  SSGLIHSNPQDEPGSTEIEIPFSDVPSNYEDIQKLVHGDEINGSTCTVDPVEGGGHFKHP 732
             S   H NPQDEP S E+EI + D  SN++++   + GDEING TC++D VE     KHP
Sbjct: 685  CSDFTHGNPQDEPDSAEVEILYPDQLSNFKEVPMTMLGDEINGPTCSLDTVEDDDRMKHP 744

Query: 733  SSP-----DKHVMANGVVTEIVQ 786
            +SP     D +VM N +    VQ
Sbjct: 745  ASPDCILQDDYVMVNNMFPVTVQ 767


>ref|XP_002323646.1| predicted protein [Populus trichocarpa] gi|222868276|gb|EEF05407.1|
            predicted protein [Populus trichocarpa]
          Length = 1606

 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 12/230 (5%)
 Frame = +1

Query: 94   DRTGL--VGSIDSKPNSPSLIKDDACHVDSSDKISFDNLVDDDAHIQSDDSLQVSNDLEL 267
            +R GL    S  +  + PS +  DA   DSS   S D L  +D  + +D  + VSN  +L
Sbjct: 564  ERNGLYPTDSFIALTDIPSQMGHDASLPDSSKSHSVDVLDHEDPDMLTDAVVHVSNMSDL 623

Query: 268  AHEDECCDHSEIKMFQAESHKENSSEISICRDIGSQGEDSVFPSMEELDLNSGINQMLDC 447
            A E +  D S  ++ Q +   E+S+       +    E     ++  ++L++G+  + D 
Sbjct: 624  ASEKKVSDDSVNEVLQTDCAAEHST-------LTPAEEQFPHSALPVVELDAGVPSLPDN 676

Query: 448  RG--------SKDEDCISARHLSLEDLSPVVKAPPVSCFNGEISSGLIHSNPQDEPGSTE 603
                      SK +D I  R  S E  +PVV      C N    S +     Q+E  ST+
Sbjct: 677  SNVVKPDGLVSKADDEILTREGSAEISTPVVDTSESECINEHQFSDVTVDASQEELDSTK 736

Query: 604  IEIPFSDVPSNYEDIQKLVHGDEINGSTCTVDPVEGGG-HFKHPS-SPDK 747
            + +P S+     E+I +    +E N ST  VD   G    F+H S S DK
Sbjct: 737  LRLPCSEENVKLEEISEGPDAEEKNASTKKVDITRGDATSFEHESCSSDK 786


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