BLASTX nr result

ID: Glycyrrhiza23_contig00026659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026659
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601137.1| Auxin response factor [Medicago truncatula] ...   182   3e-44
ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793...   166   2e-39
ref|XP_002513844.1| Auxin response factor, putative [Ricinus com...   152   4e-35
ref|XP_002307410.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Gl...   145   4e-33

>ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
           gi|355490185|gb|AES71388.1| Auxin response factor
           [Medicago truncatula]
          Length = 593

 Score =  182 bits (463), Expect = 3e-44
 Identities = 90/123 (73%), Positives = 99/123 (80%)
 Frame = -3

Query: 371 LEPKIWRACAGAGAQIPTVNSRVYYFPQGHMDQASSPPQNLSHQLLSRPFILCRISAVQF 192
           L PK+WRA AGA  QIPTVNSRVYYFPQGHMDQA+S P NLS  LLSRP+ILC +SAV F
Sbjct: 16  LNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQATSLPNNLSPLLLSRPYILCSVSAVHF 75

Query: 191 LADPLTDEVFAKLLLHPLIDFSSAIPQPADGGADEGDRVVSFAKTLTPSDANNGGGFSVP 12
           LADP TDEVFAKL L PL DF+   P+     AD+G+R+ SFAK LTPSDANNGGGFSVP
Sbjct: 76  LADPKTDEVFAKLFLQPLNDFTVNFPRIPVIEADDGERISSFAKILTPSDANNGGGFSVP 135

Query: 11  RFC 3
           RFC
Sbjct: 136 RFC 138


>ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
          Length = 1160

 Score =  166 bits (421), Expect = 2e-39
 Identities = 82/130 (63%), Positives = 98/130 (75%), Gaps = 6/130 (4%)
 Frame = -3

Query: 374 LLEPKIWRACAGAGAQIPTVNSRVYYFPQGHMDQASSPPQNLSHQLLSRPFILCRISAVQ 195
           +L+P +W  CAG   +IPT++SRVYYFPQGH DQASS P+NLS  LLS+P +LCR+ +VQ
Sbjct: 15  VLDPALWLVCAGTTVEIPTLHSRVYYFPQGHFDQASSAPRNLSPLLLSKPAVLCRVESVQ 74

Query: 194 FLADPLTDEVFAKLLLHPLIDF-----SSAIPQPADGGADEGD-RVVSFAKTLTPSDANN 33
           FLADPLTDEVFAKL+LHP+ D      S+  P  A   A  G+  VVSF+K LT SDANN
Sbjct: 75  FLADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGENNVVSFSKVLTASDANN 134

Query: 32  GGGFSVPRFC 3
           GGGFSVPRFC
Sbjct: 135 GGGFSVPRFC 144


>ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
           gi|223546930|gb|EEF48427.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 603

 Score =  152 bits (384), Expect = 4e-35
 Identities = 77/138 (55%), Positives = 98/138 (71%), Gaps = 15/138 (10%)
 Frame = -3

Query: 371 LEPKIWRACAGAGAQIPTVNSRVYYFPQGHMDQASSPPQ-----NLSHQLLSRPFILCRI 207
           ++ +IWRACAG+  QIPT+NSRVYYFPQGH++Q+S+         LS   LS+P I C+I
Sbjct: 14  VDRRIWRACAGSSVQIPTINSRVYYFPQGHLEQSSNSSSIVSSCILSSIALSKPVIPCQI 73

Query: 206 SAVQFLADPLTDEVFAKLLLHPLIDFSSAIPQPADGG----------ADEGDRVVSFAKT 57
           SAVQFLADP+TDEV+ KLLL P+  F+ ++P     G           D+ D++V+FAK 
Sbjct: 74  SAVQFLADPVTDEVYTKLLLFPIDSFNPSVPVLEHSGNLEQHHGYDYDDDEDKIVAFAKI 133

Query: 56  LTPSDANNGGGFSVPRFC 3
           LTPSDANNGGGFSVPRFC
Sbjct: 134 LTPSDANNGGGFSVPRFC 151


>ref|XP_002307410.1| predicted protein [Populus trichocarpa] gi|222856859|gb|EEE94406.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  150 bits (380), Expect = 1e-34
 Identities = 78/134 (58%), Positives = 98/134 (73%), Gaps = 15/134 (11%)
 Frame = -3

Query: 359 IWRACAGAGAQIPTVNSRVYYFPQGHMDQASSP----PQNLSHQLLSRPFILCRISAVQF 192
           IWRACAG+  QIPT+NSRVYYFPQGH++Q+SS     P  LS+  LS+P I C+ISAV F
Sbjct: 1   IWRACAGSSVQIPTINSRVYYFPQGHLEQSSSSTAPHPPFLSNLALSKPLISCQISAVDF 60

Query: 191 LADPLTDEVFAKLLLHPLIDFSSAI------PQPADGGA-----DEGDRVVSFAKTLTPS 45
           LADP+TDEVF +LLL PL + S  +      P  ++GG      D+ +++++FAK LTPS
Sbjct: 61  LADPVTDEVFIRLLLLPLNNHSCNLPLSFLEPSRSEGGGVNDVDDDENKILAFAKILTPS 120

Query: 44  DANNGGGFSVPRFC 3
           DANNGGGFSVPRFC
Sbjct: 121 DANNGGGFSVPRFC 134


>ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
          Length = 551

 Score =  145 bits (366), Expect = 4e-33
 Identities = 80/134 (59%), Positives = 93/134 (69%), Gaps = 11/134 (8%)
 Frame = -3

Query: 371 LEPKIWRACAGAGAQIPTVNSRVYYFPQGHMDQASSPPQNLSHQLLSRPFILCRISAVQF 192
           ++PKIWRACAGA  QIP ++SRVYYFPQGHM+ A SP   LS  + S PF+ C +S++ F
Sbjct: 9   VDPKIWRACAGAAVQIPKLHSRVYYFPQGHMEHA-SPSHYLSPLIRSLPFVPCHVSSLDF 67

Query: 191 LADPLTDEVFAKLLLHPLIDFSSAIPQP-------ADGGADEGDR----VVSFAKTLTPS 45
           LADP +DEVFAK LL PL   S +  QP       A    D+ DR    VVSFAK LTPS
Sbjct: 68  LADPFSDEVFAKFLLTPL---SQSQQQPFQNDTKEARNDDDDEDRENNGVVSFAKILTPS 124

Query: 44  DANNGGGFSVPRFC 3
           DANNGGGFSVPRFC
Sbjct: 125 DANNGGGFSVPRFC 138