BLASTX nr result

ID: Glycyrrhiza23_contig00026654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026654
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519868.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   216   1e-54
ref|XP_003629318.1| DNA-(apurinic or apyrimidinic site) lyase [M...   216   2e-54
ref|XP_003548849.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurini...   197   7e-49
ref|XP_002304326.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_003631894.1| PREDICTED: DNA-(apurinic or apyrimidinic sit...   177   8e-43

>ref|XP_003519868.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like
           [Glycine max]
          Length = 622

 Score =  216 bits (551), Expect = 1e-54
 Identities = 107/122 (87%), Positives = 111/122 (90%)
 Frame = -2

Query: 366 AEVFNFGSRIDHILCAGSCLHKSDDLQCHSFMRCHVKECDILTQYKRCKPESTLSAHRWK 187
           AEVFNFGSRIDHIL AGSCLH+ DDLQCHSF+RCHVKECDILTQYKRCKPESTL   RWK
Sbjct: 254 AEVFNFGSRIDHILFAGSCLHELDDLQCHSFIRCHVKECDILTQYKRCKPESTL---RWK 310

Query: 186 GGRSVKLEGSDHAPVFMTLMEIPEVSLHSTPSLSARYVPMVHGIQQTLVSVLMKRQFSEQ 7
           GG SVKLEGSDHAPV M+L EIP+VSLHSTPSLSARYVPMVHGIQQTLVSVLMKRQ SE 
Sbjct: 311 GGHSVKLEGSDHAPVLMSLHEIPDVSLHSTPSLSARYVPMVHGIQQTLVSVLMKRQVSEL 370

Query: 6   TK 1
            K
Sbjct: 371 MK 372


>ref|XP_003629318.1| DNA-(apurinic or apyrimidinic site) lyase [Medicago truncatula]
           gi|355523340|gb|AET03794.1| DNA-(apurinic or
           apyrimidinic site) lyase [Medicago truncatula]
          Length = 613

 Score =  216 bits (550), Expect = 2e-54
 Identities = 102/122 (83%), Positives = 113/122 (92%)
 Frame = -2

Query: 366 AEVFNFGSRIDHILCAGSCLHKSDDLQCHSFMRCHVKECDILTQYKRCKPESTLSAHRWK 187
           AEVFN+GSRIDHILCAGSCLHKSDDLQ HSF+ CHVKEC+ILTQYKR KPESTLS+HRWK
Sbjct: 255 AEVFNYGSRIDHILCAGSCLHKSDDLQSHSFIGCHVKECEILTQYKRFKPESTLSSHRWK 314

Query: 186 GGRSVKLEGSDHAPVFMTLMEIPEVSLHSTPSLSARYVPMVHGIQQTLVSVLMKRQFSEQ 7
           GG+S+KLEGSDHAPV  TLM IPEVSLHSTPSLS+RYVPMVHG+QQ+LVS+LMKR+ SE 
Sbjct: 315 GGQSIKLEGSDHAPVCATLMGIPEVSLHSTPSLSSRYVPMVHGVQQSLVSLLMKRRVSES 374

Query: 6   TK 1
            K
Sbjct: 375 CK 376


>ref|XP_003548849.1| PREDICTED: LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site)
           lyase 2-like [Glycine max]
          Length = 566

 Score =  197 bits (501), Expect = 7e-49
 Identities = 102/126 (80%), Positives = 110/126 (87%), Gaps = 4/126 (3%)
 Frame = -2

Query: 366 AEVFNFGSRIDHILCAGSCLHKSDDLQCHSFMRCHVKECDILTQYKRCKPESTLSAHRWK 187
           AEVFNFGSRIDHIL +GSC H+ D LQCHSF+RC VKECDILTQYKRCKPESTL   RWK
Sbjct: 254 AEVFNFGSRIDHILFSGSCXHELD-LQCHSFIRCLVKECDILTQYKRCKPESTL---RWK 309

Query: 186 GGRSVKLEGSDHAPVFMTLMEIPEVSLHSTPSLSARYVPMVHGIQQTL----VSVLMKRQ 19
           GGRSVKLEGSDHAPVFM+L EIP+VSLHSTP LSARYVPMVHGIQQTL    +SVLMKRQ
Sbjct: 310 GGRSVKLEGSDHAPVFMSLHEIPDVSLHSTPPLSARYVPMVHGIQQTLATKHLSVLMKRQ 369

Query: 18  FSEQTK 1
            S++ K
Sbjct: 370 VSKKMK 375


>ref|XP_002304326.1| predicted protein [Populus trichocarpa] gi|222841758|gb|EEE79305.1|
           predicted protein [Populus trichocarpa]
          Length = 617

 Score =  180 bits (456), Expect = 1e-43
 Identities = 84/120 (70%), Positives = 100/120 (83%)
 Frame = -2

Query: 366 AEVFNFGSRIDHILCAGSCLHKSDDLQCHSFMRCHVKECDILTQYKRCKPESTLSAHRWK 187
           AE+FNFGSRIDHILCAG CLH+  DLQ H+F+ CHVKECDILTQYKR KP  +    RWK
Sbjct: 250 AELFNFGSRIDHILCAGPCLHQEHDLQGHNFLSCHVKECDILTQYKRWKPGDST---RWK 306

Query: 186 GGRSVKLEGSDHAPVFMTLMEIPEVSLHSTPSLSARYVPMVHGIQQTLVSVLMKRQFSEQ 7
           GGR +KLEGSDHAPV+M+L EI ++  HSTP LSARY+PM+HG+QQTLV++LMKRQ + Q
Sbjct: 307 GGRGIKLEGSDHAPVYMSLEEICDIPRHSTPPLSARYLPMIHGVQQTLVTLLMKRQAATQ 366


>ref|XP_003631894.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like isoform
           2 [Vitis vinifera]
          Length = 596

 Score =  177 bits (449), Expect = 8e-43
 Identities = 87/122 (71%), Positives = 100/122 (81%)
 Frame = -2

Query: 366 AEVFNFGSRIDHILCAGSCLHKSDDLQCHSFMRCHVKECDILTQYKRCKPESTLSAHRWK 187
           AE FN+GSRIDHIL +GSCLH+   LQ   F+ CHVKECDILTQ+KR KP +     RWK
Sbjct: 228 AEEFNYGSRIDHILSSGSCLHQDHCLQDRIFVTCHVKECDILTQFKRWKPGNK---PRWK 284

Query: 186 GGRSVKLEGSDHAPVFMTLMEIPEVSLHSTPSLSARYVPMVHGIQQTLVSVLMKRQFSEQ 7
           GGRS+KLEGSDHAPVFM+LM+IP+V+ HSTPSLSARYVP VHG QQT+ SVLMKRQ +EQ
Sbjct: 285 GGRSIKLEGSDHAPVFMSLMDIPDVAQHSTPSLSARYVPTVHGFQQTIASVLMKRQKAEQ 344

Query: 6   TK 1
            K
Sbjct: 345 VK 346


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