BLASTX nr result

ID: Glycyrrhiza23_contig00026648 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026648
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535759.1| PREDICTED: hippocampus abundant transcript 1...   128   6e-28
ref|XP_003555206.1| PREDICTED: hippocampus abundant transcript 1...   127   9e-28
ref|XP_002280708.1| PREDICTED: hippocampus abundant transcript 1...   100   2e-19
ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002510601.1| tetracycline transporter, putative [Ricinus ...    87   1e-15

>ref|XP_003535759.1| PREDICTED: hippocampus abundant transcript 1 protein-like [Glycine
           max]
          Length = 443

 Score =  128 bits (321), Expect = 6e-28
 Identities = 69/94 (73%), Positives = 74/94 (78%), Gaps = 2/94 (2%)
 Frame = +1

Query: 16  MRQPLLKXXXXXXXXXXXXDDSS--SARTFKKLPSLGDLICLLKCSPTFSQATAVLLFNS 189
           +RQPLLK            DDS+  SA TFKKLPSLGD ICLLKCSPTFSQA  V  FNS
Sbjct: 197 IRQPLLKVVEESCAE----DDSTPKSAGTFKKLPSLGDFICLLKCSPTFSQAAIVSFFNS 252

Query: 190 LADGGLMAILLYYLKARFQYNKNQFADLMMITGI 291
           LADGGLMA+LLYYLKARFQ+NKNQFADL+MITGI
Sbjct: 253 LADGGLMAVLLYYLKARFQFNKNQFADLLMITGI 286


>ref|XP_003555206.1| PREDICTED: hippocampus abundant transcript 1 protein-like [Glycine
           max]
          Length = 443

 Score =  127 bits (319), Expect = 9e-28
 Identities = 68/94 (72%), Positives = 74/94 (78%), Gaps = 2/94 (2%)
 Frame = +1

Query: 16  MRQPLLKXXXXXXXXXXXXDDSS--SARTFKKLPSLGDLICLLKCSPTFSQATAVLLFNS 189
           +RQPLLK            DDSS  +  TFKKLPSLGDLICLL+CSPTFSQA  V  FNS
Sbjct: 197 LRQPLLKEVEEPCDE----DDSSPRATGTFKKLPSLGDLICLLRCSPTFSQAAMVSFFNS 252

Query: 190 LADGGLMAILLYYLKARFQYNKNQFADLMMITGI 291
           LADGGLMA+LLYYLKARFQ+NKNQFADL+MITGI
Sbjct: 253 LADGGLMAVLLYYLKARFQFNKNQFADLLMITGI 286


>ref|XP_002280708.1| PREDICTED: hippocampus abundant transcript 1 protein [Vitis
           vinifera] gi|297744560|emb|CBI37822.3| unnamed protein
           product [Vitis vinifera]
          Length = 439

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/73 (63%), Positives = 57/73 (78%)
 Frame = +1

Query: 73  DDSSSARTFKKLPSLGDLICLLKCSPTFSQATAVLLFNSLADGGLMAILLYYLKARFQYN 252
           + S   +TFKK+PS+GDLI LLKC   FSQA  V+ FN LA+GGL A LLY+LKARF +N
Sbjct: 214 NSSEKIQTFKKIPSVGDLISLLKCRAAFSQAAVVVFFNGLAEGGLQASLLYFLKARFHFN 273

Query: 253 KNQFADLMMITGI 291
           KNQFAD+M+I G+
Sbjct: 274 KNQFADIMLIVGV 286


>ref|XP_002306959.1| predicted protein [Populus trichocarpa] gi|222856408|gb|EEE93955.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/71 (63%), Positives = 53/71 (74%)
 Frame = +1

Query: 79  SSSARTFKKLPSLGDLICLLKCSPTFSQATAVLLFNSLADGGLMAILLYYLKARFQYNKN 258
           S + + FK  PSL D++CLLK S T SQA  V  F SLA+ GL A LLYYLKARF +NK+
Sbjct: 222 SKNVQIFKSAPSLEDMLCLLKSSVTLSQAAVVAFFYSLAEVGLHASLLYYLKARFHFNKD 281

Query: 259 QFADLMMITGI 291
           QFADLM+ITGI
Sbjct: 282 QFADLMVITGI 292


>ref|XP_002510601.1| tetracycline transporter, putative [Ricinus communis]
           gi|223551302|gb|EEF52788.1| tetracycline transporter,
           putative [Ricinus communis]
          Length = 442

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/73 (57%), Positives = 56/73 (76%)
 Frame = +1

Query: 73  DDSSSARTFKKLPSLGDLICLLKCSPTFSQATAVLLFNSLADGGLMAILLYYLKARFQYN 252
           + S + + F+ +PSL D+ICLLK S TF+QA  V  F +L++ GL A L+YYLKARF +N
Sbjct: 215 NSSENEQVFRTMPSLEDMICLLKSSVTFTQAAIVAFFINLSEVGLHASLMYYLKARFHFN 274

Query: 253 KNQFADLMMITGI 291
           KNQFADLM+I+GI
Sbjct: 275 KNQFADLMVISGI 287


Top