BLASTX nr result

ID: Glycyrrhiza23_contig00026640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026640
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595756.1| Cleavage stimulation factor subunit 1-like p...   418   e-115
ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subun...   388   e-106
ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...   353   2e-95
ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   345   5e-93
ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun...   338   8e-91

>ref|XP_003595756.1| Cleavage stimulation factor subunit 1-like protein [Medicago
           truncatula] gi|355484804|gb|AES66007.1| Cleavage
           stimulation factor subunit 1-like protein [Medicago
           truncatula]
          Length = 487

 Score =  418 bits (1075), Expect = e-115
 Identities = 209/234 (89%), Positives = 224/234 (95%), Gaps = 1/234 (0%)
 Frame = -1

Query: 699 MDNNSS-SEQTVQDGKLYRHLNSLIVAHLRDNNLTQAASAVASATMTPLNVEAPPNKLLQ 523
           M+N+SS SEQTV+DGKLYRHLNSLIVAHLR NNLTQAA+AVASATMTP NV+APPNKLLQ
Sbjct: 1   MENSSSRSEQTVEDGKLYRHLNSLIVAHLRHNNLTQAATAVASATMTPFNVQAPPNKLLQ 60

Query: 522 LFAKGLAVEKDDVSRGTLSSPFRDLGASLPVPRPGASGIDFSSLPDIKGSSKSFPKHETR 343
           L +KGLA EKDD+ RG  SSPF+DLGASLP+PRPGA+ IDFSSL DIKGSSKSFPKHETR
Sbjct: 61  LLSKGLAAEKDDLPRGISSSPFQDLGASLPLPRPGATTIDFSSLSDIKGSSKSFPKHETR 120

Query: 342 HLSEHKNIARCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSVIRTYYD 163
           HLSEHKN+ARCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSV++TYYD
Sbjct: 121 HLSEHKNVARCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSVVKTYYD 180

Query: 162 HIQPINDLDFHPQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSF 1
           HIQP+NDLDF+PQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSF
Sbjct: 181 HIQPVNDLDFNPQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSF 234


>ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subunit 1-like [Glycine max]
          Length = 425

 Score =  388 bits (997), Expect = e-106
 Identities = 197/231 (85%), Positives = 211/231 (91%)
 Frame = -1

Query: 693 NNSSSEQTVQDGKLYRHLNSLIVAHLRDNNLTQAASAVASATMTPLNVEAPPNKLLQLFA 514
           +NSSSEQTVQDGKLYR+LNSLIVAHLRDN+LTQAASAVASATMTPLNVEAPPN+LL L A
Sbjct: 2   DNSSSEQTVQDGKLYRNLNSLIVAHLRDNSLTQAASAVASATMTPLNVEAPPNRLLDLVA 61

Query: 513 KGLAVEKDDVSRGTLSSPFRDLGASLPVPRPGASGIDFSSLPDIKGSSKSFPKHETRHLS 334
           KGLAVEK D++RGT        G +  +P P  + IDFSS+PD+KGSSKSFPKHETRHLS
Sbjct: 62  KGLAVEKGDITRGT--------GFTATLPLPHTTAIDFSSVPDVKGSSKSFPKHETRHLS 113

Query: 333 EHKNIARCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSVIRTYYDHIQ 154
           EHKNIARCARFS DGRFVATGSADTSIKLFEVSKIKQMLLP+AKDGPVR VIRTYYDHIQ
Sbjct: 114 EHKNIARCARFSADGRFVATGSADTSIKLFEVSKIKQMLLPEAKDGPVRPVIRTYYDHIQ 173

Query: 153 PINDLDFHPQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSF 1
           PINDLDFHPQGTIL+SGAKDQTIKFFDISKTNAKR+YRVIQDTHNVRSVSF
Sbjct: 174 PINDLDFHPQGTILISGAKDQTIKFFDISKTNAKRAYRVIQDTHNVRSVSF 224


>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score =  353 bits (907), Expect = 2e-95
 Identities = 178/235 (75%), Positives = 201/235 (85%), Gaps = 5/235 (2%)
 Frame = -1

Query: 690 NSSSEQTVQDGKLYRHLNSLIVAHLRDNNLTQAASAVASATMTPLNVEAPPNKLLQLFAK 511
           NSS EQT+QDGKL+R LNSLIVAHLRD++LTQA   +ASATMTPLNVEAPPNKLL+L AK
Sbjct: 3   NSSLEQTLQDGKLHRQLNSLIVAHLRDSSLTQA---IASATMTPLNVEAPPNKLLELVAK 59

Query: 510 GLAVEKDDVSRGTLSSPFRDLGASLP-----VPRPGASGIDFSSLPDIKGSSKSFPKHET 346
           GLA EKD++ RG  S+   DLG  LP     +P P A+ +DFS+  D KGSSK+F KHET
Sbjct: 60  GLAAEKDEMLRGVTSTAMYDLGTLLPAAYGSIPAPRAASVDFSAAQDTKGSSKNFSKHET 119

Query: 345 RHLSEHKNIARCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSVIRTYY 166
           RHLSEHKNIARCARFSPDGRFVATGSADTSIKLFE+SKIKQM+L DA+DGPVR VIRT+Y
Sbjct: 120 RHLSEHKNIARCARFSPDGRFVATGSADTSIKLFEISKIKQMMLSDARDGPVRPVIRTFY 179

Query: 165 DHIQPINDLDFHPQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSF 1
           DHIQPINDLDFHPQ T+L+SGAKD TIKFFD SK  AK+++RVIQDTHNVRSVSF
Sbjct: 180 DHIQPINDLDFHPQNTVLISGAKDHTIKFFDFSKATAKKAFRVIQDTHNVRSVSF 234


>ref|XP_004157439.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 437

 Score =  345 bits (886), Expect = 5e-93
 Identities = 173/232 (74%), Positives = 197/232 (84%), Gaps = 5/232 (2%)
 Frame = -1

Query: 684 SSEQTVQDGKLYRHLNSLIVAHLRDNNLTQAASAVASATMTPLNVEAPPNKLLQLFAKGL 505
           S EQT+QDG+LYR +NSLIVAHLRD+NLTQAASA ASATMTPLNV+ PP KL++L AKGL
Sbjct: 4   SFEQTLQDGQLYRQVNSLIVAHLRDHNLTQAASAAASATMTPLNVDVPPKKLMELVAKGL 63

Query: 504 AVEKDDVSRGTLSSPFRDLGASLPVPRPGA-----SGIDFSSLPDIKGSSKSFPKHETRH 340
           AVEKD+  RG+ +S   + G+S+P     A     S IDFS+  D KGSSK+FPKHETRH
Sbjct: 64  AVEKDETLRGSPASALYEFGSSMPTTFGSAQPSRPSAIDFSTTQDTKGSSKNFPKHETRH 123

Query: 339 LSEHKNIARCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDAKDGPVRSVIRTYYDH 160
           LSEHKN+ARCARFS DGRFVATGSAD SIKLFEV+KIKQM+LPDAKDGPVR VIRT+YDH
Sbjct: 124 LSEHKNVARCARFSADGRFVATGSADMSIKLFEVAKIKQMMLPDAKDGPVRPVIRTFYDH 183

Query: 159 IQPINDLDFHPQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVS 4
           IQPINDLDFHPQ T+LVSGAKD TIKFFD SK  AK+++RVIQDTHNVRS+S
Sbjct: 184 IQPINDLDFHPQNTVLVSGAKDHTIKFFDFSKLTAKKAFRVIQDTHNVRSIS 235


>ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis
           vinifera]
          Length = 440

 Score =  338 bits (867), Expect = 8e-91
 Identities = 173/234 (73%), Positives = 199/234 (85%), Gaps = 8/234 (3%)
 Frame = -1

Query: 678 EQTVQDGKLYRHLNSLIVAHLRDNNLTQAASAVASATMTPLNVEAPPNKLLQLFAKGLAV 499
           EQT+Q+GKLYR +N+LIVA+LRD NLTQAASAVASATMTPLNV+ PP KL+ L AKGLAV
Sbjct: 6   EQTLQEGKLYRQINALIVAYLRDYNLTQAASAVASATMTPLNVDTPPYKLIDLVAKGLAV 65

Query: 498 EKDDVSRGTL-SSPFRDLGASLPV-----PRPGASGIDFSSLPDIKGSSKSFPKHETRHL 337
           EKD++ +G + S+ F D GA +PV     P P    +DF ++ D KGSSKSFPKHETRH+
Sbjct: 66  EKDEMLKGGVPSAAFLDSGAVMPVTYGSIPAPRTVAVDFGAVHDTKGSSKSFPKHETRHV 125

Query: 336 SEHKNIARCARFSPDGRFVATGSADTSIKLFEVSKIKQMLLPDA--KDGPVRSVIRTYYD 163
           SEHKN+ARCARFS DGRFVATGSAD SIKLFE+SKIKQM+LPDA  +DGPVR VIRT+YD
Sbjct: 126 SEHKNLARCARFSLDGRFVATGSADMSIKLFEISKIKQMMLPDANTRDGPVRPVIRTFYD 185

Query: 162 HIQPINDLDFHPQGTILVSGAKDQTIKFFDISKTNAKRSYRVIQDTHNVRSVSF 1
           HIQPINDLDFHPQ T+L+SGAKD TIKFFD SKT AKR++RVIQDTHNVRSVSF
Sbjct: 186 HIQPINDLDFHPQSTVLISGAKDHTIKFFDFSKTVAKRAFRVIQDTHNVRSVSF 239


Top