BLASTX nr result

ID: Glycyrrhiza23_contig00026635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026635
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   175   4e-42
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...   172   3e-41
ref|XP_003626059.1| Condensin-2 complex subunit D3 [Medicago tru...   136   2e-30
emb|CBI26044.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   132   2e-29

>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  175 bits (443), Expect = 4e-42
 Identities = 98/134 (73%), Positives = 109/134 (81%)
 Frame = +1

Query: 1   KMALGKPSLRLLAVDLMLNLLTSLKDPLGLGVISEGEENNGDEVSWGVWCLEALVKRCYD 180
           +MA GK +LRLLAVDL+LNL+TSL+DPLG  V SEG E      +WGVWCLEALVKRC D
Sbjct: 319 QMAQGKSNLRLLAVDLILNLVTSLRDPLG--VESEGSE------AWGVWCLEALVKRCSD 370

Query: 181 VSGVIRARALSNLAQVVGFLSGDGKASVVLKEFMGFGEVGDGNAVVGGKNGMNDMLRRRC 360
           VSG IRARALSNLAQ+VGFLS   + S VLKEF GFG VGDGN  VGG  GMNDMLRRRC
Sbjct: 371 VSGAIRARALSNLAQLVGFLSRGERTSAVLKEFTGFGRVGDGN--VGG--GMNDMLRRRC 426

Query: 361 VDEKAAVRKAAILL 402
           +D+KAAVRKAA+LL
Sbjct: 427 MDDKAAVRKAALLL 440


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score =  172 bits (435), Expect = 3e-41
 Identities = 93/134 (69%), Positives = 107/134 (79%)
 Frame = +1

Query: 1   KMALGKPSLRLLAVDLMLNLLTSLKDPLGLGVISEGEENNGDEVSWGVWCLEALVKRCYD 180
           +MA GK SLRLLAVDL+LNL+ SLKDPLG+    E EE+      WG+WCLE L+KRC D
Sbjct: 329 QMAQGKSSLRLLAVDLILNLVMSLKDPLGV----ESEESE----VWGIWCLEVLLKRCSD 380

Query: 181 VSGVIRARALSNLAQVVGFLSGDGKASVVLKEFMGFGEVGDGNAVVGGKNGMNDMLRRRC 360
           VSG IRARALSNLAQ+VGFLS   + SVVLKEFMGFG+VGDGN     + GMNDMLRRRC
Sbjct: 381 VSGAIRARALSNLAQLVGFLSRGERTSVVLKEFMGFGKVGDGNV----EGGMNDMLRRRC 436

Query: 361 VDEKAAVRKAAILL 402
           +D+KAAVRKAA+LL
Sbjct: 437 MDDKAAVRKAALLL 450


>ref|XP_003626059.1| Condensin-2 complex subunit D3 [Medicago truncatula]
           gi|355501074|gb|AES82277.1| Condensin-2 complex subunit
           D3 [Medicago truncatula]
          Length = 854

 Score =  136 bits (342), Expect = 2e-30
 Identities = 80/134 (59%), Positives = 94/134 (70%)
 Frame = +1

Query: 1   KMALGKPSLRLLAVDLMLNLLTSLKDPLGLGVISEGEENNGDEVSWGVWCLEALVKRCYD 180
           KM+LGK +LRLLAVDL+LN+LTSLKDPLG+                       LVKRC D
Sbjct: 46  KMSLGKVNLRLLAVDLILNMLTSLKDPLGV-----------------------LVKRCSD 82

Query: 181 VSGVIRARALSNLAQVVGFLSGDGKASVVLKEFMGFGEVGDGNAVVGGKNGMNDMLRRRC 360
            S +IRA+AL +LAQV+ FLSG+ KASVVLKEF+GF    DGN V  G  G+N+MLRRRC
Sbjct: 83  FSAMIRAKALPSLAQVLRFLSGNDKASVVLKEFLGF---DDGNVVDVGGKGINEMLRRRC 139

Query: 361 VDEKAAVRKAAILL 402
           VDEKA VRKAA+LL
Sbjct: 140 VDEKAIVRKAALLL 153


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  132 bits (333), Expect = 2e-29
 Identities = 76/136 (55%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
 Frame = +1

Query: 1   KMALGKPSLRLLAVDLMLNLLTSLKDPLGLGVISEGEENNGDEV--SWGVWCLEALVKRC 174
           KM  GK   RLLAVDL   L+ SL+DPLG+        N G+EV  SWG+ CLEAL++RC
Sbjct: 303 KMTQGKSHFRLLAVDLFPLLIMSLRDPLGV--------NTGNEVKNSWGLNCLEALIQRC 354

Query: 175 YDVSGVIRARALSNLAQVVGFLSGDGKASVVLKEFMGFGEVGDGNAVVGGKNGMNDMLRR 354
            D +  IRARAL+NLAQ+VGFLS D +  V+LKE MGFG           + G+ND+LR+
Sbjct: 355 SDATAGIRARALTNLAQIVGFLSTDDRNQVMLKEGMGFGSSSHQKL----EGGVNDLLRK 410

Query: 355 RCVDEKAAVRKAAILL 402
           RC+DEKAAVRKAA+LL
Sbjct: 411 RCMDEKAAVRKAALLL 426


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  132 bits (333), Expect = 2e-29
 Identities = 76/136 (55%), Positives = 94/136 (69%), Gaps = 2/136 (1%)
 Frame = +1

Query: 1   KMALGKPSLRLLAVDLMLNLLTSLKDPLGLGVISEGEENNGDEV--SWGVWCLEALVKRC 174
           KM  GK   RLLAVDL   L+ SL+DPLG+        N G+EV  SWG+ CLEAL++RC
Sbjct: 344 KMTQGKSHFRLLAVDLFPLLIMSLRDPLGV--------NTGNEVKNSWGLNCLEALIQRC 395

Query: 175 YDVSGVIRARALSNLAQVVGFLSGDGKASVVLKEFMGFGEVGDGNAVVGGKNGMNDMLRR 354
            D +  IRARAL+NLAQ+VGFLS D +  V+LKE MGFG           + G+ND+LR+
Sbjct: 396 SDATAGIRARALTNLAQIVGFLSTDDRNQVMLKEGMGFGSSSHQKL----EGGVNDLLRK 451

Query: 355 RCVDEKAAVRKAAILL 402
           RC+DEKAAVRKAA+LL
Sbjct: 452 RCMDEKAAVRKAALLL 467


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