BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026624
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   214   9e-54
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   199   2e-49
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...   197   7e-49
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   191   5e-47
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   190   1e-46

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  214 bits (544), Expect = 9e-54
 Identities = 91/174 (52%), Positives = 138/174 (79%)
 Frame = -3

Query: 527  NQTLITLIPKVDNVSNIRDFRPISLCNVAYKVITKILAHRLRFIMGTLVNPCQSSFIPNR 348
            N T I LIPK+D     + FRPI LCN+ YK++TK++ +RL+ I+ +L++P Q SF+PNR
Sbjct: 492  NDTFIVLIPKMDIPQLAKHFRPIGLCNIVYKIVTKVIINRLKPILPSLISPTQCSFVPNR 551

Query: 347  QSRDNINVAQEVFHSMRTKKGKVGWMAIKIDLEKAYDRLSWSFIKETLDDIGLPKNFVDL 168
            Q  DN+ + QE+FHSMR K+GK G+MA+KID EKAYDRL W+FI+E+L ++ +P++ VD+
Sbjct: 552  QITDNVIIVQEMFHSMRNKQGKKGFMAVKIDFEKAYDRLRWTFIRESLMELRIPQHLVDI 611

Query: 167  ICHCISSSRLRMLWNGEALEEFSPSRGIRQGDPISPYLFVLCIRKLFQMINRAV 6
            + +C+SS+ L++LWNGE +E+  P+RG+RQGDP+SPYL+V+C+ +L  +I++ V
Sbjct: 612  VMNCVSSANLQILWNGEPMEKICPTRGLRQGDPLSPYLYVICMERLAHLIDQEV 665


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score =  199 bits (506), Expect = 2e-49
 Identities = 91/177 (51%), Positives = 121/177 (68%)
 Frame = -3

Query: 536 RDINQTLITLIPKVDNVSNIRDFRPISLCNVAYKVITKILAHRLRFIMGTLVNPCQSSFI 357
           +  N  L+ L+ KV     I  FRP+SLCNV +K+ITK++  RL+ ++  L+ P Q+SFI
Sbjct: 298 KSTNDVLLVLLAKVAKPERITQFRPVSLCNVLFKIITKMMVIRLKNVISKLIGPAQASFI 357

Query: 356 PNRQSRDNINVAQEVFHSMRTKKGKVGWMAIKIDLEKAYDRLSWSFIKETLDDIGLPKNF 177
           P R S DNI V QE  HSMR KKG+ GWM +K+DLEKAYDR+ W F+ ETL+  GL + +
Sbjct: 358 PGRLSFDNIVVVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRIRWDFLAETLEAAGLSEGW 417

Query: 176 VDLICHCISSSRLRMLWNGEALEEFSPSRGIRQGDPISPYLFVLCIRKLFQMINRAV 6
           +  I  C++   + +LWNGE  + F+P RG+RQGDPISPYLFVLCI +L   I  AV
Sbjct: 418 IKRIMECVAGPEMSLLWNGEKTDSFTPERGLRQGDPISPYLFVLCIERLCHQIETAV 474


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score =  197 bits (502), Expect = 7e-49
 Identities = 90/175 (51%), Positives = 120/175 (68%)
 Frame = -3

Query: 530  INQTLITLIPKVDNVSNIRDFRPISLCNVAYKVITKILAHRLRFIMGTLVNPCQSSFIPN 351
            I+ TLI LIPK+D+ +  +DFRPISLCN  YK+ITK+L HRLR  +  L+ P QSSF+P 
Sbjct: 487  ISNTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVHRLRPFLNNLIGPYQSSFLPG 546

Query: 350  RQSRDNINVAQEVFHSMRTKKGKVGWMAIKIDLEKAYDRLSWSFIKETLDDIGLPKNFVD 171
            R + DN  + QE+ H M+  K K G++A K+DLEKA+D ++W F+   L D G P   V 
Sbjct: 547  RGTADNSIILQEILHFMKRSKRKKGYVAFKLDLEKAFDNVNWDFLNSCLLDFGFPDIIVK 606

Query: 170  LICHCISSSRLRMLWNGEALEEFSPSRGIRQGDPISPYLFVLCIRKLFQMINRAV 6
            LI HC+SS+   +LWNG  +  F P+ G+RQGDP+SPYLF+LC+ KL   I  AV
Sbjct: 607  LIMHCVSSANYSLLWNGNKMPPFKPTHGLRQGDPLSPYLFILCMEKLSVAIQDAV 661


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  191 bits (486), Expect = 5e-47
 Identities = 89/177 (50%), Positives = 124/177 (70%)
 Frame = -3

Query: 539  VRDINQTLITLIPKVDNVSNIRDFRPISLCNVAYKVITKILAHRLRFIMGTLVNPCQSSF 360
            ++++N T + LIPKVD   N   FRPISLC+  YKVI+KI+ +RL+  +G +++P Q +F
Sbjct: 497  LKEVNHTFLALIPKVDKPVNANHFRPISLCSTIYKVISKIITNRLKITLGKIIHPLQGAF 556

Query: 359  IPNRQSRDNINVAQEVFHSMRTKKGKVGWMAIKIDLEKAYDRLSWSFIKETLDDIGLPKN 180
            IP R  +DNI +A EVFHS + K G+ GW+AIK+D+EKAYDRL W +I  T+D +G    
Sbjct: 557  IPERLIQDNILIAHEVFHSFKNKTGRGGWIAIKLDMEKAYDRLEWKYIYTTMDKMGFSPI 616

Query: 179  FVDLICHCISSSRLRMLWNGEALEEFSPSRGIRQGDPISPYLFVLCIRKLFQMINRA 9
            +++ I  CISS+   +L NG   E F PSRGIRQGDP+SPYLF+LC   L +  ++A
Sbjct: 617  WIEWIRSCISSASFSVLVNGIPGERFFPSRGIRQGDPLSPYLFILCAELLAREFSKA 673


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score =  190 bits (483), Expect = 1e-46
 Identities = 87/174 (50%), Positives = 121/174 (69%)
 Frame = -3

Query: 527 NQTLITLIPKVDNVSNIRDFRPISLCNVAYKVITKILAHRLRFIMGTLVNPCQSSFIPNR 348
           N  L+ LI KV     I+ FRP+SLCNV +K+ITK++  RL+ ++  L+ P Q+SFIP R
Sbjct: 349 NDALLVLIAKVAKPERIQQFRPVSLCNVLFKIITKMMVTRLKNVISKLIGPAQASFIPGR 408

Query: 347 QSRDNINVAQEVFHSMRTKKGKVGWMAIKIDLEKAYDRLSWSFIKETLDDIGLPKNFVDL 168
            S DNI + QE  HSMR KKG+ GWM +K+DLEKAYDR+ W F++ETL+  GL + +   
Sbjct: 409 LSIDNIVLVQEAVHSMRRKKGRKGWMLLKLDLEKAYDRVRWDFLQETLEAAGLSEGWTSR 468

Query: 167 ICHCISSSRLRMLWNGEALEEFSPSRGIRQGDPISPYLFVLCIRKLFQMINRAV 6
           I   ++   + +LWNGE  + F P+RG+RQGDP+SPYLFVLC+ +L  +I  +V
Sbjct: 469 IMAGVTDPSMSVLWNGERTDSFVPARGLRQGDPLSPYLFVLCLERLCHLIEASV 522