BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026619
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525896.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   162   3e-38
ref|XP_003524036.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   162   3e-38
ref|XP_003549531.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   144   6e-33
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   139   2e-31

>ref|XP_003525896.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Glycine max]
          Length = 973

 Score =  162 bits (410), Expect = 3e-38
 Identities = 79/104 (75%), Positives = 90/104 (86%)
 Frame = +3

Query: 3   LPHVKALMLGWFEPLKEAVEAEQTAHQARTNKRKASFAPHVDSLPADKVAVIVMHKMMAL 182
           LPHVK+L+LGWFEP + AVEAEQTAH+AR  K++ S APHVD LPADKVAVIVMHKMMA+
Sbjct: 173 LPHVKSLLLGWFEPFRAAVEAEQTAHRARPKKQQDSIAPHVDDLPADKVAVIVMHKMMAM 232

Query: 183 VMENEGGCVRLVQAAVQIGMAVEQEVRIHKFIEENKSHRRKKKE 314
           VMENE GCV+LV AAV IGMA+EQEVRIHKF+E NKS + KK E
Sbjct: 233 VMENEEGCVQLVHAAVHIGMALEQEVRIHKFVEGNKSSQSKKTE 276


>ref|XP_003524036.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Glycine max]
          Length = 1043

 Score =  162 bits (410), Expect = 3e-38
 Identities = 79/104 (75%), Positives = 90/104 (86%)
 Frame = +3

Query: 3   LPHVKALMLGWFEPLKEAVEAEQTAHQARTNKRKASFAPHVDSLPADKVAVIVMHKMMAL 182
           LPHVKAL+LGWFEP + AVEAEQTAH AR  K++ S APHVD LPADKVAVIVMHKMMA+
Sbjct: 243 LPHVKALLLGWFEPFRAAVEAEQTAHHARPKKQQDSIAPHVDDLPADKVAVIVMHKMMAM 302

Query: 183 VMENEGGCVRLVQAAVQIGMAVEQEVRIHKFIEENKSHRRKKKE 314
           VME+E GCV+LV AA+ IG+A+EQEVRIHKFIE NKS+R KK E
Sbjct: 303 VMESEEGCVQLVHAAIHIGLALEQEVRIHKFIEGNKSNRSKKTE 346


>ref|XP_003549531.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Glycine max]
          Length = 951

 Score =  144 bits (364), Expect = 6e-33
 Identities = 74/107 (69%), Positives = 87/107 (81%), Gaps = 2/107 (1%)
 Frame = +3

Query: 3   LPHVKALMLGWFEPLKEAVEAEQTAHQARTNKRKASFAPHVDSLPADKVAVIVMHKMMAL 182
           LPHVKAL LGWF+PLKEA+EAEQ +   R+ K KA+FAPH+DSLPA K+AVIVMHK+M L
Sbjct: 150 LPHVKALFLGWFDPLKEAIEAEQKSK--RSKKHKAAFAPHIDSLPAAKLAVIVMHKVMGL 207

Query: 183 VMEN--EGGCVRLVQAAVQIGMAVEQEVRIHKFIEENKSHRRKKKEA 317
           V +     GCV LV AAVQIGMAVEQEVRIHKF+E+ +SH+ KK EA
Sbjct: 208 VTQEYRRAGCVLLVDAAVQIGMAVEQEVRIHKFLEKTRSHQSKKTEA 254


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  139 bits (350), Expect = 2e-31
 Identities = 70/103 (67%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   LPHVKALMLGWFEPLKEAVEAEQTAHQARTNKRKASFAPHVDSLPADKVAVIVMHKMMAL 182
           LP+VKAL LGWFEPL+EA++ EQ A   RT K+KA++APH++ LPADK+AVIVMHKMM L
Sbjct: 10  LPYVKALFLGWFEPLREAIDKEQRAQ--RTKKQKAAYAPHIELLPADKMAVIVMHKMMGL 67

Query: 183 VME-NEGGCVRLVQAAVQIGMAVEQEVRIHKFIEENKSHRRKK 308
           VM  +E GCVR+VQAAVQIGMA+EQEVRIH F+E+ K+  R K
Sbjct: 68  VMMGHEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHK 110


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
           vinifera]
          Length = 979

 Score =  139 bits (350), Expect = 2e-31
 Identities = 70/103 (67%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   LPHVKALMLGWFEPLKEAVEAEQTAHQARTNKRKASFAPHVDSLPADKVAVIVMHKMMAL 182
           LP+VKAL LGWFEPL+EA++ EQ A   RT K+KA++APH++ LPADK+AVIVMHKMM L
Sbjct: 181 LPYVKALFLGWFEPLREAIDKEQRAQ--RTKKQKAAYAPHIELLPADKMAVIVMHKMMGL 238

Query: 183 VME-NEGGCVRLVQAAVQIGMAVEQEVRIHKFIEENKSHRRKK 308
           VM  +E GCVR+VQAAVQIGMA+EQEVRIH F+E+ K+  R K
Sbjct: 239 VMMGHEEGCVRVVQAAVQIGMAIEQEVRIHSFLEKTKNFERHK 281