BLASTX nr result

ID: Glycyrrhiza23_contig00026602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026602
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|2...   215   7e-54
ref|XP_003552426.1| PREDICTED: RING-H2 finger protein ATL68-like...   213   2e-53
ref|XP_003534530.1| PREDICTED: RING-H2 finger protein ATL68-like...   206   3e-51
ref|XP_002880221.1| zinc finger family protein [Arabidopsis lyra...   206   4e-51
ref|NP_182139.1| RING-H2 finger protein ATL67 [Arabidopsis thali...   206   4e-51

>ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|222860935|gb|EEE98477.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  215 bits (548), Expect = 7e-54
 Identities = 106/179 (59%), Positives = 125/179 (69%), Gaps = 13/179 (7%)
 Frame = +1

Query: 34  YLTNLGFGYSIAIAXXXXXXXXXXXXXXXXCCRTFRNRHDRHPNRQN-----LPDGVVLP 198
           YLTNLG GYSIAIA                CCRT R+R     N  N       DG++LP
Sbjct: 23  YLTNLGLGYSIAIALFFLVLLSTILLASYICCRTNRHRSRNSNNNNNNYANSTADGIILP 82

Query: 199 RVIFVAEEDEDNERD--GVVLGLDQSVINSYPRLQYARDAGYDS------TTCSICLSEY 354
           R+IFVAE+DE+ ERD     +GL+Q+VINSYP+ Q+++D G+         TCSICL EY
Sbjct: 83  RIIFVAEDDEEQERDLESAAVGLNQAVINSYPKFQFSKDGGFSERTNNFCNTCSICLCEY 142

Query: 355 KESEMLRMMPECRHYFHLCCLDSWLKLNGSCPVCRNSPMPTPLSTPLQEVVPLSHFAAD 531
           K+ EMLRMMP+CRHYFHL CLD+WLKLNGSCPVCRNSP+PTPLSTPL EVVPLS +AAD
Sbjct: 143 KDLEMLRMMPDCRHYFHLLCLDAWLKLNGSCPVCRNSPLPTPLSTPLSEVVPLSQYAAD 201


>ref|XP_003552426.1| PREDICTED: RING-H2 finger protein ATL68-like [Glycine max]
          Length = 179

 Score =  213 bits (543), Expect = 2e-53
 Identities = 107/170 (62%), Positives = 124/170 (72%), Gaps = 4/170 (2%)
 Frame = +1

Query: 34  YLTNLGFGYSIAIAXXXXXXXXXXXXXXXXCCRTFRNRHDRHPNRQNLPDG-VVLPRVIF 210
           +  +LG GYSIAIA                CCR  R RH +        DG +VLPRVIF
Sbjct: 5   HFPHLGLGYSIAIALAFLFLLSTLLLSSYLCCRHNRRRHTQTTASAAASDGGIVLPRVIF 64

Query: 211 VAEEDEDNERDGVVLGLDQSVINSYPRLQYARDA---GYDSTTCSICLSEYKESEMLRMM 381
           VAE+D+++    +V+GLDQSVINSYPR Q+ +D+      +TTCSICL EYK+SEMLRMM
Sbjct: 65  VAEDDDEDADACMVVGLDQSVINSYPRFQFNKDSDARNIINTTCSICLCEYKDSEMLRMM 124

Query: 382 PECRHYFHLCCLDSWLKLNGSCPVCRNSPMPTPLSTPLQEVVPLSHFAAD 531
           PECRHYFHLCCLDSWLKLNGSCPVCRNSP+PTPLSTPLQEVVPLS +AAD
Sbjct: 125 PECRHYFHLCCLDSWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAAD 174


>ref|XP_003534530.1| PREDICTED: RING-H2 finger protein ATL68-like [Glycine max]
          Length = 184

 Score =  206 bits (525), Expect = 3e-51
 Identities = 111/172 (64%), Positives = 121/172 (70%), Gaps = 6/172 (3%)
 Frame = +1

Query: 34  YLTNLGFGYSIAIAXXXXXXXXXXXXXXXXCCRTFRNRHDRHPNRQNLPDG-VVLPRVIF 210
           +  +LG GYSIAIA                CCR  R R  RH       DG +VLPRVIF
Sbjct: 12  HFPHLGLGYSIAIALAFLFLLSTLLLSSYLCCRHNRRRL-RHTTAAATSDGGIVLPRVIF 70

Query: 211 VAE-EDEDNERDGVVLGLDQSVINSYPRLQYARDAGYDS----TTCSICLSEYKESEMLR 375
           VAE EDED     V +G DQSVINSYPR Q+ RD   ++    TTCSICL EYK+SEMLR
Sbjct: 71  VAEDEDEDGS---VAVGFDQSVINSYPRFQFNRDNARNNNIINTTCSICLCEYKDSEMLR 127

Query: 376 MMPECRHYFHLCCLDSWLKLNGSCPVCRNSPMPTPLSTPLQEVVPLSHFAAD 531
           MMPECRHYFHLCCLDSWLKLNGSCPVCRNSP+PTPLSTPLQEVVPLS +AAD
Sbjct: 128 MMPECRHYFHLCCLDSWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAAD 179


>ref|XP_002880221.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326060|gb|EFH56480.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score =  206 bits (524), Expect = 4e-51
 Identities = 107/180 (59%), Positives = 123/180 (68%), Gaps = 14/180 (7%)
 Frame = +1

Query: 34  YLTNLGFGYSIAIAXXXXXXXXXXXXXXXXCCRTFRNRHDRHPNRQNLPDGVVLPRVIFV 213
           YLT LGFGYSIAIA                CCR  R R     +  +    V+LPR+IFV
Sbjct: 29  YLTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESAGDHGGSVILPRIIFV 88

Query: 214 AEED-EDNERDGVVLGLDQSVINSYPRLQYARDA---------GYDSTTCSICLSEYKES 363
           AEED ED E   VV+GLDQ+VINSYP+  +++D+         G   TTCSICL EYKE+
Sbjct: 89  AEEDNEDLEAGDVVVGLDQAVINSYPKFHFSKDSSAASSDGFGGGGDTTCSICLCEYKEA 148

Query: 364 EMLRMMPECRHYFHLCCLDSWLKLNGSCPVCRNSPMP----TPLSTPLQEVVPLSHFAAD 531
           EMLRMMPEC+HYFHLCCLD+WLKLNGSCPVCRNSP+P    TPLSTPL EVVPLS +AAD
Sbjct: 149 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLSQYAAD 208


>ref|NP_182139.1| RING-H2 finger protein ATL67 [Arabidopsis thaliana]
           gi|68565091|sp|O82353.1|ATL67_ARATH RecName:
           Full=RING-H2 finger protein ATL67
           gi|3702333|gb|AAC62890.1| hypothetical protein
           [Arabidopsis thaliana] gi|18491265|gb|AAL69457.1|
           At2g46160/T3F17.19 [Arabidopsis thaliana]
           gi|330255556|gb|AEC10650.1| RING-H2 finger protein ATL67
           [Arabidopsis thaliana]
          Length = 214

 Score =  206 bits (524), Expect = 4e-51
 Identities = 107/180 (59%), Positives = 122/180 (67%), Gaps = 14/180 (7%)
 Frame = +1

Query: 34  YLTNLGFGYSIAIAXXXXXXXXXXXXXXXXCCRTFRNRHDRHPNRQNLPDGVVLPRVIFV 213
           YLT LGFGYSIAIA                CCR  R R     +  +    V+LPR+IFV
Sbjct: 29  YLTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRGGSVILPRIIFV 88

Query: 214 AEED-EDNERDGVVLGLDQSVINSYPRLQYARDA---------GYDSTTCSICLSEYKES 363
           AEED ED E   VV+GLDQ+VINSYP+  +++D          G   TTCSICL EYKE+
Sbjct: 89  AEEDNEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEA 148

Query: 364 EMLRMMPECRHYFHLCCLDSWLKLNGSCPVCRNSPMP----TPLSTPLQEVVPLSHFAAD 531
           EMLRMMPEC+HYFHLCCLD+WLKLNGSCPVCRNSP+P    TPLSTPL EVVPLS +AAD
Sbjct: 149 EMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLSEVVPLSQYAAD 208


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