BLASTX nr result

ID: Glycyrrhiza23_contig00026568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026568
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...    68   7e-10
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...    68   7e-10
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]       63   3e-08
ref|XP_003616704.1| hypothetical protein MTR_5g083380 [Medicago ...    63   3e-08
gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold ...    61   1e-07

>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/61 (54%), Positives = 47/61 (77%)
 Frame = -1

Query: 212 LMRFLTGLNESFGPCKSQILMMDLLPSIDRAFSMVVQYERQNQLAPDDEDSQSLINVADG 33
           +MRFLTGLN+ F   KSQIL+++ LPSI + FSMV+Q+ERQN   P+ +DS++L+N +  
Sbjct: 385 VMRFLTGLNDEFNAVKSQILLIEPLPSITKIFSMVIQFERQN-CVPNLDDSKALVNASTS 443

Query: 32  K 30
           K
Sbjct: 444 K 444


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/61 (54%), Positives = 47/61 (77%)
 Frame = -1

Query: 212 LMRFLTGLNESFGPCKSQILMMDLLPSIDRAFSMVVQYERQNQLAPDDEDSQSLINVADG 33
           +MRFLTGLN+ F   KSQIL+++ LPSI + FSMV+Q+ERQN   P+ +DS++L+N +  
Sbjct: 192 VMRFLTGLNDEFNAVKSQILLIEPLPSITKIFSMVIQFERQN-CVPNLDDSKALVNASTS 250

Query: 32  K 30
           K
Sbjct: 251 K 251


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
 Frame = -1

Query: 251 LSKYIEKMKEHDFLMRFLTGLNESFGPCKSQILMMDLLPSIDRAFSMVVQYERQNQL--A 78
           L+KY    +  D +++FLTGLN++F   K+QIL+MD LP I++ +S+VVQ E QN +   
Sbjct: 175 LAKYY---RTEDQILQFLTGLNDTFSVVKTQILLMDPLPPINKVYSLVVQEESQNIVFST 231

Query: 77  PDDEDSQSL-INVADGKKFKRKG 12
           P   D  S+ +N +D +KF  +G
Sbjct: 232 PSISDDSSISVNASDARKFYPRG 254


>ref|XP_003616704.1| hypothetical protein MTR_5g083380 [Medicago truncatula]
           gi|355518039|gb|AES99662.1| hypothetical protein
           MTR_5g083380 [Medicago truncatula]
          Length = 323

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 7/76 (9%)
 Frame = -1

Query: 218 DFLMRFLTGLNESFGPCKSQILMMDLLPSIDRAFSMVVQYERQN-----QLAP--DDEDS 60
           D +++FLTGLN++F   KSQ+L+M+ LPSI++ +SM VQ E  N     +L P    +D 
Sbjct: 162 DQVIQFLTGLNDNFSVVKSQVLLMEPLPSINKVYSMFVQEESNNVALLTKLDPVLSADDP 221

Query: 59  QSLINVADGKKFKRKG 12
            +LIN AD +KF+ +G
Sbjct: 222 NTLINAADSRKFQPRG 237


>gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 772

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/68 (45%), Positives = 48/68 (70%), Gaps = 4/68 (5%)
 Frame = -1

Query: 218 DFLMRFLTGLNESFGPCKSQILMMDLLPSIDRAFSMVVQYERQNQLAP----DDEDSQSL 51
           D +++FLTGLN+SF   K+Q+L++D LPSI++ +SMV+Q E  N + P     +EDS  L
Sbjct: 187 DQVIQFLTGLNDSFSVVKTQVLLIDPLPSINKVYSMVIQ-EESNIIPPTSLASNEDSSIL 245

Query: 50  INVADGKK 27
           +N +D +K
Sbjct: 246 VNASDARK 253


Top