BLASTX nr result

ID: Glycyrrhiza23_contig00026560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026560
         (864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600269.1| Replication protein A 70 kDa DNA-binding sub...   229   5e-58
ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding sub...   228   1e-57
ref|XP_003599985.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   213   6e-53
ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding sub...   183   4e-44
ref|XP_003629969.1| Replication factor A protein [Medicago trunc...   183   5e-44

>ref|XP_003600269.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355489317|gb|AES70520.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 323

 Score =  229 bits (585), Expect = 5e-58
 Identities = 113/186 (60%), Positives = 141/186 (75%)
 Frame = +1

Query: 307 MALPITPVSEISASRETWSIIARVVRLWVVSDFTKHKIPFSIEMVLMDEHGDRIHASVKR 486
           MAL   P+S+IS+S+   +I ARVVRLW +SDF ++ +PFSIEMVLMD  G RIHAS+K+
Sbjct: 1   MALTFEPISQISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKK 60

Query: 487 TLVYKFVKLVKEGSVYSFQFLTVATNVGGFRTNHHAHKLNFQISTEVQLMDTGRVLGDGF 666
           TL YKF   ++EG VYSF+ + VA N G ++T HH +KLNFQ  T+   +    V G  F
Sbjct: 61  TLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNFQFGTKCLPLCGALVSGSDF 120

Query: 667 ELVPISDISGIGFDTDFLVDVIGMLTGVGTEREYERNGSKTKLNVISLEDDGHRLECTLF 846
           + VPISDI G  +D D+LVDVIGMLTGVGTEREYERNGS TKLNVI++E DG++L+CTLF
Sbjct: 121 KFVPISDIVGGSYDCDYLVDVIGMLTGVGTEREYERNGSATKLNVIAMEADGYKLQCTLF 180

Query: 847 GPYVDE 864
           G YVDE
Sbjct: 181 GTYVDE 186


>ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355489320|gb|AES70523.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 701

 Score =  228 bits (581), Expect = 1e-57
 Identities = 112/186 (60%), Positives = 141/186 (75%)
 Frame = +1

Query: 307 MALPITPVSEISASRETWSIIARVVRLWVVSDFTKHKIPFSIEMVLMDEHGDRIHASVKR 486
           MAL   P+S+IS+S+   +I ARVVRLW +SDF ++ +PFSIEMVLMD  G RIHAS+K+
Sbjct: 1   MALTFEPISQISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKK 60

Query: 487 TLVYKFVKLVKEGSVYSFQFLTVATNVGGFRTNHHAHKLNFQISTEVQLMDTGRVLGDGF 666
           TL YKF   ++EG VYSF+ + VA N G ++T HH +KLNFQ  T+   +    V G  F
Sbjct: 61  TLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNFQFGTKCLPLFGALVSGSDF 120

Query: 667 ELVPISDISGIGFDTDFLVDVIGMLTGVGTEREYERNGSKTKLNVISLEDDGHRLECTLF 846
           + VPISDI G  +D D+LVDVIGMLTGVGTEREYERNGS TKLNVI++E DG++L+CTLF
Sbjct: 121 KFVPISDIVGGSYDCDYLVDVIGMLTGVGTEREYERNGSATKLNVIAMEADGYKLQCTLF 180

Query: 847 GPYVDE 864
           G YVD+
Sbjct: 181 GTYVDK 186



 Score =  145 bits (367), Expect = 9e-33
 Identities = 74/145 (51%), Positives = 95/145 (65%)
 Frame = +1

Query: 430 IEMVLMDEHGDRIHASVKRTLVYKFVKLVKEGSVYSFQFLTVATNVGGFRTNHHAHKLNF 609
           + + L    G +IHAS+K+TL YKF   ++EG VYSF+ + VA N G ++T HH +KLN 
Sbjct: 201 VSIQLAKVKGSKIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNV 260

Query: 610 QISTEVQLMDTGRVLGDGFELVPISDISGIGFDTDFLVDVIGMLTGVGTEREYERNGSKT 789
           Q  T+                     + G  +D D+LVDVIGMLTGVGTEREYERNGS T
Sbjct: 261 QFGTKCL------------------PLCGGSYDCDYLVDVIGMLTGVGTEREYERNGSAT 302

Query: 790 KLNVISLEDDGHRLECTLFGPYVDE 864
           KLNVI++E DG++L+CTLFG YVDE
Sbjct: 303 KLNVIAMEADGYKLQCTLFGTYVDE 327


>ref|XP_003599985.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355489033|gb|AES70236.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 537

 Score =  213 bits (541), Expect = 6e-53
 Identities = 104/176 (59%), Positives = 131/176 (74%)
 Frame = +1

Query: 307 MALPITPVSEISASRETWSIIARVVRLWVVSDFTKHKIPFSIEMVLMDEHGDRIHASVKR 486
           MAL   P+S+IS+S+  W+I ARVVRLW VSDF ++ +PFSIEMVLMD  G RIHAS+K+
Sbjct: 1   MALTFEPISQISSSKPAWNIKARVVRLWKVSDFNRNTLPFSIEMVLMDSEGSRIHASIKK 60

Query: 487 TLVYKFVKLVKEGSVYSFQFLTVATNVGGFRTNHHAHKLNFQISTEVQLMDTGRVLGDGF 666
           TL+YKF   ++EG VYSF+ + +A N G ++T HH +KLNFQ  T+   +    V G  F
Sbjct: 61  TLLYKFQSEIREGKVYSFENMGIAANGGSYKTTHHPYKLNFQFGTKCLSLCGALVSGSDF 120

Query: 667 ELVPISDISGIGFDTDFLVDVIGMLTGVGTEREYERNGSKTKLNVISLEDDGHRLE 834
           + VPISDI G  +D D+LVDVIGMLTGVGT+REYERNGS TKLNVI++E DG   E
Sbjct: 121 KFVPISDIVGGSYDCDYLVDVIGMLTGVGTKREYERNGSATKLNVIAMEADGFCFE 176


>ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355484558|gb|AES65761.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 549

 Score =  183 bits (465), Expect = 4e-44
 Identities = 92/186 (49%), Positives = 128/186 (68%)
 Frame = +1

Query: 307 MALPITPVSEISASRETWSIIARVVRLWVVSDFTKHKIPFSIEMVLMDEHGDRIHASVKR 486
           MA  I  +S+IS S+E W+I  RVVRLW V D  K ++P+S+EMVLMD  GDRI+ASV+R
Sbjct: 1   MAPKIDLISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMDNKGDRINASVRR 60

Query: 487 TLVYKFVKLVKEGSVYSFQFLTVATNVGGFRTNHHAHKLNFQISTEVQLMDTGRVLGDGF 666
           TL+YK+ K ++E  V+S    +VA+NVG +RT  H +K+NFQ  T+++  D   V  D +
Sbjct: 61  TLIYKYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQCDDKFVPADIY 120

Query: 667 ELVPISDISGIGFDTDFLVDVIGMLTGVGTEREYERNGSKTKLNVISLEDDGHRLECTLF 846
            +    +I    +DTD+L+DV+GML  VG E+ Y RNGS++K+  I L+ DG R + TLF
Sbjct: 121 VIGDSREIFQSEYDTDYLIDVMGMLKAVGVEKSYTRNGSQSKMIPIELDYDGFRFKVTLF 180

Query: 847 GPYVDE 864
           GPYVDE
Sbjct: 181 GPYVDE 186


>ref|XP_003629969.1| Replication factor A protein [Medicago truncatula]
           gi|355523991|gb|AET04445.1| Replication factor A protein
           [Medicago truncatula]
          Length = 296

 Score =  183 bits (464), Expect = 5e-44
 Identities = 83/179 (46%), Positives = 127/179 (70%)
 Frame = +1

Query: 328 VSEISASRETWSIIARVVRLWVVSDFTKHKIPFSIEMVLMDEHGDRIHASVKRTLVYKFV 507
           +S +S  +++W+++ RVVR W   D+   K+PFS+E VL+D  GD+I AS++RTL+YKF 
Sbjct: 8   ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMEFVLIDRKGDQIGASIRRTLIYKFK 67

Query: 508 KLVKEGSVYSFQFLTVATNVGGFRTNHHAHKLNFQISTEVQLMDTGRVLGDGFELVPISD 687
           + ++EG V++     VA+N G +R +H+ +KLNF I+T+V+L  T  V  + +   P  D
Sbjct: 68  EQLQEGMVFTISSFDVASNSGSYRPSHNEYKLNFTINTKVKLSKTILVPINVYSFTPAPD 127

Query: 688 ISGIGFDTDFLVDVIGMLTGVGTEREYERNGSKTKLNVISLEDDGHRLECTLFGPYVDE 864
           +    +D ++LVDVIG++ GVG EREYER G+KTK+NVI L+ +G+R +CTLFG YV+E
Sbjct: 128 VFNESYDNNYLVDVIGVIIGVGVEREYEREGTKTKMNVIELDSNGYRFKCTLFGEYVEE 186


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