BLASTX nr result

ID: Glycyrrhiza23_contig00026539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026539
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537423.1| PREDICTED: uncharacterized protein LOC100802...    89   4e-16
ref|XP_003600616.1| Zinc finger CCCH domain-containing protein [...    72   4e-11
ref|XP_003600614.1| Zinc finger CCCH domain-containing protein [...    69   3e-10
ref|XP_003600612.1| Zinc finger CCCH domain-containing protein [...    62   4e-08

>ref|XP_003537423.1| PREDICTED: uncharacterized protein LOC100802210 [Glycine max]
          Length = 337

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 65/140 (46%), Positives = 80/140 (57%), Gaps = 30/140 (21%)
 Frame = +1

Query: 1   NDLPELAIGETRNSVGRYSNQD--------------PKSPVEKNQ---AFP-ASDEQLFS 126
           N L ELA G+T NS GR+S                 PK  V++NQ   AFP AS E LF+
Sbjct: 46  NGLSELASGKTCNSAGRHSKHSGFVHCLNNRTDVAGPKFAVKENQDDTAFPVASVENLFA 105

Query: 127 QSASQDKGTSQRNLIQSTSKARQDDHKATPFEELNSK-----------HQAFNPEKCCLP 273
            ++SQDKGTSQRNL QS SKARQD  +AT FEEL +             +  NP K  L 
Sbjct: 106 DTSSQDKGTSQRNLPQSASKARQDGPEATHFEELINPAKQDDPEATLFEELSNPAKYGLC 165

Query: 274 QPKNIESGSG-MDGRSVSAT 330
           QP+N ESGS  ++GR++S T
Sbjct: 166 QPRNTESGSVIINGRNLSGT 185


>ref|XP_003600616.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355489664|gb|AES70867.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 487

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 51/102 (50%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
 Frame = +1

Query: 4   DLPELAIGETRNSVGRYSNQDPKSPVEKNQ---AFPASDEQLFSQSASQDKGTSQRNLIQ 174
           DLP+L IGET NS   +    PK+PV+ NQ    FPA+  Q+   +ASQ+K TSQ NLIQ
Sbjct: 184 DLPDLVIGETCNSGADFLG--PKTPVKNNQDDTTFPATVVQVSVHTASQEKDTSQ-NLIQ 240

Query: 175 STSKARQDDHKATPFEELNSKHQAFNPEKCCLPQPKNIESGS 300
            T K+R DD K    +E NS HQ+    KC LPQP N  S S
Sbjct: 241 YTMKSR-DDCKHALVKEPNSDHQSL---KCGLPQPSNTISAS 278


>ref|XP_003600614.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355489662|gb|AES70865.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 964

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 48/125 (38%), Positives = 61/125 (48%), Gaps = 17/125 (13%)
 Frame = +1

Query: 1   NDLPELAIGETRNSVGRYSNQD--------------PKSPVEKNQ---AFPASDEQLFSQ 129
           NDL  +AIGET NS G+YS  +              PKSPV+ NQ    FPA+ EQL   
Sbjct: 595 NDLQVVAIGETCNSGGQYSTHNGFALCLDKRTDVVGPKSPVKNNQDDPVFPATVEQLSVL 654

Query: 130 SASQDKGTSQRNLIQSTSKARQDDHKATPFEELNSKHQAFNPEKCCLPQPKNIESGSGMD 309
           +AS+DK                DD K    +E NS  Q  NP+KC LPQP    +   +D
Sbjct: 655 AASEDK----------------DDGKPALLKESNSNCQTLNPKKCGLPQPSTTSASEDVD 698

Query: 310 GRSVS 324
            R++S
Sbjct: 699 CRNLS 703


>ref|XP_003600612.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355489660|gb|AES70863.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 862

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/84 (51%), Positives = 51/84 (60%), Gaps = 18/84 (21%)
 Frame = +1

Query: 1   NDLPELAIGETRNSVGRYSNQD--------------PKSPVEKNQ---AFPASD-EQLFS 126
           NDLPELAIGET NSVG+YS  D              PK+PV+ NQ   AFPA+  +Q+  
Sbjct: 634 NDLPELAIGETCNSVGQYSTHDGFAQCLDKRTDVLGPKTPVKNNQDGTAFPAATVDQVSV 693

Query: 127 QSASQDKGTSQRNLIQSTSKARQD 198
            + SQ K TSQ NLIQ TS +R D
Sbjct: 694 HTVSQVKETSQ-NLIQDTSISRDD 716


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