BLASTX nr result

ID: Glycyrrhiza23_contig00026512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026512
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago trun...   295   2e-78
ref|XP_003543556.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   293   1e-77
ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   293   1e-77
ref|XP_002513444.1| Type II DNA topoisomerase VI subunit B, puta...   285   3e-75
ref|XP_002283111.2| PREDICTED: DNA topoisomerase 6 subunit B [Vi...   282   2e-74

>ref|XP_003597480.1| DNA topoisomerase 6 subunit B [Medicago truncatula]
           gi|355486528|gb|AES67731.1| DNA topoisomerase 6 subunit
           B [Medicago truncatula]
          Length = 671

 Score =  295 bits (756), Expect = 2e-78
 Identities = 140/150 (93%), Positives = 147/150 (98%)
 Frame = -1

Query: 452 RLAKEARAQEIQAKNAALGKKAKETPASKGIKGRGEASFYRVTCKDNGRGMAHDDIPNMF 273
           RLAKEARAQE+QAKNAALGKK K+TPASKG+KGRGEASFYRVTCKDNG+GM HDDIPNMF
Sbjct: 117 RLAKEARAQELQAKNAALGKKVKDTPASKGMKGRGEASFYRVTCKDNGKGMPHDDIPNMF 176

Query: 272 GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMRKQNYISFCRLDIDIHK 93
           GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSM+KQNYISFCRLDIDIHK
Sbjct: 177 GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMKKQNYISFCRLDIDIHK 236

Query: 92  NIPHVHLHEKRENKEHWHGAEIQVVIEGNW 3
           NIPHVHLHEKREN ++WHGAEIQVVIEGNW
Sbjct: 237 NIPHVHLHEKRENNQNWHGAEIQVVIEGNW 266


>ref|XP_003543556.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 2 [Glycine
           max]
          Length = 656

 Score =  293 bits (750), Expect = 1e-77
 Identities = 139/150 (92%), Positives = 145/150 (96%)
 Frame = -1

Query: 452 RLAKEARAQEIQAKNAALGKKAKETPASKGIKGRGEASFYRVTCKDNGRGMAHDDIPNMF 273
           RLAKEARAQE+QAKNAALGKK K+TPASK IKGRGEASFYRVTCKDNG+GM HDDIPNMF
Sbjct: 119 RLAKEARAQEMQAKNAALGKKVKDTPASKAIKGRGEASFYRVTCKDNGKGMPHDDIPNMF 178

Query: 272 GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMRKQNYISFCRLDIDIHK 93
           GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEI+SSM+ QNY+SFCRLDIDIHK
Sbjct: 179 GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEITSSMKNQNYVSFCRLDIDIHK 238

Query: 92  NIPHVHLHEKRENKEHWHGAEIQVVIEGNW 3
           NIPHVHLHEKRENKEHW GAEIQVVIEGNW
Sbjct: 239 NIPHVHLHEKRENKEHWRGAEIQVVIEGNW 268


>ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 1 [Glycine
           max]
          Length = 673

 Score =  293 bits (750), Expect = 1e-77
 Identities = 139/150 (92%), Positives = 145/150 (96%)
 Frame = -1

Query: 452 RLAKEARAQEIQAKNAALGKKAKETPASKGIKGRGEASFYRVTCKDNGRGMAHDDIPNMF 273
           RLAKEARAQE+QAKNAALGKK K+TPASK IKGRGEASFYRVTCKDNG+GM HDDIPNMF
Sbjct: 119 RLAKEARAQEMQAKNAALGKKVKDTPASKAIKGRGEASFYRVTCKDNGKGMPHDDIPNMF 178

Query: 272 GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMRKQNYISFCRLDIDIHK 93
           GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEI+SSM+ QNY+SFCRLDIDIHK
Sbjct: 179 GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEITSSMKNQNYVSFCRLDIDIHK 238

Query: 92  NIPHVHLHEKRENKEHWHGAEIQVVIEGNW 3
           NIPHVHLHEKRENKEHW GAEIQVVIEGNW
Sbjct: 239 NIPHVHLHEKRENKEHWRGAEIQVVIEGNW 268


>ref|XP_002513444.1| Type II DNA topoisomerase VI subunit B, putative [Ricinus communis]
           gi|223547352|gb|EEF48847.1| Type II DNA topoisomerase VI
           subunit B, putative [Ricinus communis]
          Length = 656

 Score =  285 bits (729), Expect = 3e-75
 Identities = 134/150 (89%), Positives = 144/150 (96%)
 Frame = -1

Query: 452 RLAKEARAQEIQAKNAALGKKAKETPASKGIKGRGEASFYRVTCKDNGRGMAHDDIPNMF 273
           RLAKEARAQEIQAKNAALG+K KE PA+KG+KGRGEASFY+VTCKDNGRGM HDDIPNMF
Sbjct: 119 RLAKEARAQEIQAKNAALGRKVKEQPAAKGMKGRGEASFYKVTCKDNGRGMPHDDIPNMF 178

Query: 272 GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMRKQNYISFCRLDIDIHK 93
           GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPI+ISSSM+ QNYISFCRLDIDIH+
Sbjct: 179 GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIDISSSMKGQNYISFCRLDIDIHR 238

Query: 92  NIPHVHLHEKRENKEHWHGAEIQVVIEGNW 3
           N+PHVHLHEKR+N + WHGAEIQVVIEGNW
Sbjct: 239 NVPHVHLHEKRKNDDRWHGAEIQVVIEGNW 268


>ref|XP_002283111.2| PREDICTED: DNA topoisomerase 6 subunit B [Vitis vinifera]
          Length = 656

 Score =  282 bits (721), Expect = 2e-74
 Identities = 135/150 (90%), Positives = 142/150 (94%)
 Frame = -1

Query: 452 RLAKEARAQEIQAKNAALGKKAKETPASKGIKGRGEASFYRVTCKDNGRGMAHDDIPNMF 273
           RLAKEAR QE+QAKNAALGKK KE  ASKG+KGRGEASFYRVTCKDNGRGM HDDIPNMF
Sbjct: 119 RLAKEARTQELQAKNAALGKKVKEPQASKGMKGRGEASFYRVTCKDNGRGMPHDDIPNMF 178

Query: 272 GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMRKQNYISFCRLDIDIHK 93
           GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSM+ Q+YISFCRLDIDIH+
Sbjct: 179 GRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMKGQSYISFCRLDIDIHR 238

Query: 92  NIPHVHLHEKRENKEHWHGAEIQVVIEGNW 3
           NIPH+HLHEKR+NKE W GAEIQVVIEGNW
Sbjct: 239 NIPHIHLHEKRDNKERWCGAEIQVVIEGNW 268


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