BLASTX nr result

ID: Glycyrrhiza23_contig00026507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026507
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22118.1| polyprotein [Hydrangea macrophylla]                    118   5e-38
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...   110   3e-33
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]     107   3e-31
emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]                 102   3e-31
emb|CAE05517.1| OSJNBa0038P21.10 [Oryza sativa Japonica Group]        100   2e-30

>gb|ABG22118.1| polyprotein [Hydrangea macrophylla]
          Length = 351

 Score =  118 bits (295), Expect(2) = 5e-38
 Identities = 52/75 (69%), Positives = 64/75 (85%)
 Frame = +3

Query: 189 SLELRAYSDADWAGDPID*KSTARFCIFLGDSLISWRSKKQDIVSRSSTEAEYRAMASTT 368
           SLELRAYSDADWAGDP D +ST  +C FLGDSLISWRSKKQ +++RSSTEA+YR +A  T
Sbjct: 243 SLELRAYSDADWAGDPTDRRSTIGYCFFLGDSLISWRSKKQTVIARSSTEAKYRTLADAT 302

Query: 369 AEIVWLQWLVSDMGV 413
            E++WL+WL+ D+GV
Sbjct: 303 QELLWLRWLLEDLGV 317



 Score = 64.7 bits (156), Expect(2) = 5e-38
 Identities = 36/71 (50%), Positives = 42/71 (59%)
 Frame = +1

Query: 1   LSDPTLYHTLVGNLVYLTITRPDIAYAXXXXXXXXXXXXXXXWAAVLCILWYLRGTQFQS 180
           L+DPTLY  LVG+LVYLT+TRPDIAYA               +AAVL IL Y++GT F  
Sbjct: 176 LNDPTLYRQLVGSLVYLTVTRPDIAYAVYIVSQFLSAPRSSHFAAVLRILRYVKGTMFHG 235

Query: 181 LLFPWSCELTL 213
           L F     L L
Sbjct: 236 LHFSVHSSLEL 246


>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group] gi|78708691|gb|ABB47666.1|
            retrotransposon protein, putative, unclassified,
            expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score =  110 bits (274), Expect(2) = 3e-33
 Identities = 50/75 (66%), Positives = 64/75 (85%)
 Frame = +3

Query: 192  LELRAYSDADWAGDPID*KSTARFCIFLGDSLISWRSKKQDIVSRSSTEAEYRAMASTTA 371
            L+LRA+SD+ WA DPID +S   +CIFLG SL++W+SKKQ  VSRSSTEAE RA+A+TT+
Sbjct: 1107 LQLRAFSDSTWASDPIDRRSVTGYCIFLGTSLLTWKSKKQTAVSRSSTEAELRALATTTS 1166

Query: 372  EIVWLQWLVSDMGVS 416
            EIVWL+WL++D GVS
Sbjct: 1167 EIVWLRWLLADFGVS 1181



 Score = 57.0 bits (136), Expect(2) = 3e-33
 Identities = 32/71 (45%), Positives = 39/71 (54%)
 Frame = +1

Query: 1    LSDPTLYHTLVGNLVYLTITRPDIAYAXXXXXXXXXXXXXXXWAAVLCILWYLRGTQFQS 180
            L DP+ Y  LVG+LVYLT+TRPDIAYA               +  +L +L YLRGT  Q 
Sbjct: 1039 LDDPSRYRHLVGSLVYLTVTRPDIAYAVHILSQFVSAPISVHYGHLLRVLRYLRGTTTQC 1098

Query: 181  LLFPWSCELTL 213
            L +  S  L L
Sbjct: 1099 LFYAASSPLQL 1109


>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1419

 Score =  107 bits (268), Expect(2) = 3e-31
 Identities = 47/75 (62%), Positives = 63/75 (84%)
 Frame = +3

Query: 189  SLELRAYSDADWAGDPID*KSTARFCIFLGDSLISWRSKKQDIVSRSSTEAEYRAMASTT 368
            SLEL+AYSD+ WA DP+D  S   +CIFLG SL++W+SKKQ  +SRSS EAE RA+A+TT
Sbjct: 1259 SLELQAYSDSTWASDPVDRCSITGYCIFLGSSLLAWKSKKQTAISRSSAEAELRALATTT 1318

Query: 369  AEIVWLQWLVSDMGV 413
            AE++WL+WL++D+GV
Sbjct: 1319 AEVIWLRWLLADLGV 1333



 Score = 52.4 bits (124), Expect(2) = 3e-31
 Identities = 28/71 (39%), Positives = 39/71 (54%)
 Frame = +1

Query: 1    LSDPTLYHTLVGNLVYLTITRPDIAYAXXXXXXXXXXXXXXXWAAVLCILWYLRGTQFQS 180
            LSDP+ Y  +VG+LVYL +TRPDI++A               +A +L +L YLRGT  + 
Sbjct: 1192 LSDPSRYRHIVGSLVYLAVTRPDISHAVHVLSQFTSAPTSVHYAHLLRVLRYLRGTPSRG 1251

Query: 181  LLFPWSCELTL 213
            + F     L L
Sbjct: 1252 IFFSRDSSLEL 1262


>emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]
          Length = 1385

 Score =  102 bits (255), Expect(2) = 3e-31
 Identities = 48/76 (63%), Positives = 59/76 (77%)
 Frame = +3

Query: 189  SLELRAYSDADWAGDPID*KSTARFCIFLGDSLISWRSKKQDIVSRSSTEAEYRAMASTT 368
            SL+L+AYSDA WA DP D +S + +C+FLG SLI+W++KKQ  VSRSS EAE RAMA  T
Sbjct: 1227 SLQLQAYSDATWASDPSDRRSISAYCVFLGGSLIAWKTKKQTAVSRSSAEAELRAMALLT 1286

Query: 369  AEIVWLQWLVSDMGVS 416
            AEI WL+WL+ D  VS
Sbjct: 1287 AEITWLRWLLEDFSVS 1302



 Score = 57.4 bits (137), Expect(2) = 3e-31
 Identities = 32/71 (45%), Positives = 39/71 (54%)
 Frame = +1

Query: 1    LSDPTLYHTLVGNLVYLTITRPDIAYAXXXXXXXXXXXXXXXWAAVLCILWYLRGTQFQS 180
            LSDPT Y  LVG+LVYL +TRPDI Y                ++ +L +L YLRGT  + 
Sbjct: 1160 LSDPTRYRHLVGSLVYLAVTRPDITYPVHILSQFVSAPTQVHYSHLLRVLRYLRGTISRR 1219

Query: 181  LLFPWSCELTL 213
            L FP S  L L
Sbjct: 1220 LFFPRSSSLQL 1230


>emb|CAE05517.1| OSJNBa0038P21.10 [Oryza sativa Japonica Group]
          Length = 786

 Score =  100 bits (250), Expect(2) = 2e-30
 Identities = 47/76 (61%), Positives = 58/76 (76%)
 Frame = +3

Query: 189 SLELRAYSDADWAGDPID*KSTARFCIFLGDSLISWRSKKQDIVSRSSTEAEYRAMASTT 368
           SL+L+ YSDA WA D  D +S + FC+FLG SLI+W++KKQ  VSRSS EAE RAMA  T
Sbjct: 481 SLQLQGYSDATWASDSSDRRSLSAFCVFLGGSLIAWKTKKQTSVSRSSAEAELRAMALLT 540

Query: 369 AEIVWLQWLVSDMGVS 416
           AE+ WL+WL+ D GVS
Sbjct: 541 AEVTWLRWLLEDFGVS 556



 Score = 56.6 bits (135), Expect(2) = 2e-30
 Identities = 30/71 (42%), Positives = 41/71 (57%)
 Frame = +1

Query: 1   LSDPTLYHTLVGNLVYLTITRPDIAYAXXXXXXXXXXXXXXXWAAVLCILWYLRGTQFQS 180
           L+DPT Y  +VG+LVYL +TRPDI+Y+               ++ +L +L YLRGT  + 
Sbjct: 414 LADPTRYRHIVGSLVYLGVTRPDISYSVHILSQFVSAPTQIHYSHLLRVLRYLRGTILRC 473

Query: 181 LLFPWSCELTL 213
           L FP S  L L
Sbjct: 474 LFFPRSTSLQL 484


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