BLASTX nr result

ID: Glycyrrhiza23_contig00026486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026486
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron sp...   273   1e-71
ref|XP_003597658.1| Chloroplastic group IIA intron splicing faci...   266   1e-69
ref|XP_002516757.1| conserved hypothetical protein [Ricinus comm...   239   2e-61
emb|CBI33632.3| unnamed protein product [Vitis vinifera]              232   2e-59
ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...   232   2e-59

>ref|XP_003551841.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Glycine max]
          Length = 712

 Score =  273 bits (698), Expect = 1e-71
 Identities = 140/169 (82%), Positives = 151/169 (89%), Gaps = 4/169 (2%)
 Frame = +3

Query: 3   LTEFRKIQTKLEDIKEVNVG----LEAEIYRLERELRAEQHKAFILNKKIERSTRELSKL 170
           LTEFRKIQTKLED K VNV     LEAEI RLE+EL+ EQ +AFILNKKI+RS RELSKL
Sbjct: 482 LTEFRKIQTKLEDTKSVNVDSNIQLEAEICRLEKELKEEQRRAFILNKKIKRSERELSKL 541

Query: 171 NATWTPAEKDIDLEIMTDEERECFRKIGLKMRSCLVLGRRGVFDGVLEGLHQHWKHREVV 350
           NA WTP+E+D DLEIMTDEERECFRKIGLKM+S L+LGRRG+FDGVLEGLHQHWKHREVV
Sbjct: 542 NAAWTPSEQDTDLEIMTDEERECFRKIGLKMQSSLLLGRRGIFDGVLEGLHQHWKHREVV 601

Query: 351 KVITMQRLFSQVIYTATFLERESGGILVSVDKLKEGHAIIIYRGKNYRR 497
           KVITMQ+LFSQVI TA  LE ESGGILVSVDKLKEGHAIIIYRGKNY+R
Sbjct: 602 KVITMQKLFSQVINTAKVLETESGGILVSVDKLKEGHAIIIYRGKNYKR 650


>ref|XP_003597658.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
            truncatula] gi|355486706|gb|AES67909.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Medicago
            truncatula]
          Length = 880

 Score =  266 bits (680), Expect = 1e-69
 Identities = 139/181 (76%), Positives = 152/181 (83%), Gaps = 16/181 (8%)
 Frame = +3

Query: 3    LTEFRKIQTKLEDIKEVNVGL----EAEIYRLERELRAEQHKAFILNKKIERSTRELSKL 170
            LTEFR IQ KL+++KEVNV L    EAEIYRLE+EL+ +Q KAFILNKKIERST ELSKL
Sbjct: 589  LTEFRNIQNKLDEMKEVNVDLSIPLEAEIYRLEKELKEQQRKAFILNKKIERSTMELSKL 648

Query: 171  NATWTPAEKDIDLEIMTDEERECFRKIGLKMRSCLVLG------------RRGVFDGVLE 314
            NA W P+ +DIDLEIMTDEERECFRK+GLKMRSCLVLG            RRGVFDGVLE
Sbjct: 649  NAAWKPSGEDIDLEIMTDEERECFRKMGLKMRSCLVLGKAISLHSTTSAGRRGVFDGVLE 708

Query: 315  GLHQHWKHREVVKVITMQRLFSQVIYTATFLERESGGILVSVDKLKEGHAIIIYRGKNYR 494
            GLHQHWKHREV KVITMQRL S+VIYT+ FLERESGGILVSVD+LKEG+AIIIYRGKNY 
Sbjct: 709  GLHQHWKHREVAKVITMQRLISRVIYTSQFLERESGGILVSVDQLKEGYAIIIYRGKNYS 768

Query: 495  R 497
            R
Sbjct: 769  R 769


>ref|XP_002516757.1| conserved hypothetical protein [Ricinus communis]
            gi|223544130|gb|EEF45655.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 742

 Score =  239 bits (609), Expect = 2e-61
 Identities = 117/169 (69%), Positives = 142/169 (84%), Gaps = 4/169 (2%)
 Frame = +3

Query: 3    LTEFRKIQTKLEDI----KEVNVGLEAEIYRLERELRAEQHKAFILNKKIERSTRELSKL 170
            L EF+ IQ + +++    ++  + LEAE  +LERELR ++HK  IL  KIE+S RELSKL
Sbjct: 519  LNEFQDIQVRFKELAKGYRDSKLQLEAEKEKLERELRIQEHKLLILKSKIEKSARELSKL 578

Query: 171  NATWTPAEKDIDLEIMTDEERECFRKIGLKMRSCLVLGRRGVFDGVLEGLHQHWKHREVV 350
            N+ W PA++D DLE+MT+EEREC RKIGLKMRS L+LGRRGVFDGV+EGLHQHWKHREVV
Sbjct: 579  NSAWAPADQDADLEMMTEEERECLRKIGLKMRSSLLLGRRGVFDGVIEGLHQHWKHREVV 638

Query: 351  KVITMQRLFSQVIYTATFLERESGGILVSVDKLKEGHAIIIYRGKNYRR 497
            KVI++QR+F+QVI TA FLE E+GGILVS+DKLKEGHAIIIYRGKNYRR
Sbjct: 639  KVISLQRMFAQVIRTAKFLEAETGGILVSIDKLKEGHAIIIYRGKNYRR 687


>emb|CBI33632.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  232 bits (592), Expect = 2e-59
 Identities = 114/169 (67%), Positives = 138/169 (81%), Gaps = 4/169 (2%)
 Frame = +3

Query: 3   LTEFRKIQTKLEDIK----EVNVGLEAEIYRLERELRAEQHKAFILNKKIERSTRELSKL 170
           L+EF+ I+T+   +K    E+ V LEAE  RLE+EL+ ++   FIL +KIERS + L+KL
Sbjct: 261 LSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILKRKIERSAKVLAKL 320

Query: 171 NATWTPAEKDIDLEIMTDEERECFRKIGLKMRSCLVLGRRGVFDGVLEGLHQHWKHREVV 350
           N+ W PA+ D D E++T+EERECFRKIG KM S L+LGRRGVFDGV+EGLHQHWKHRE+V
Sbjct: 321 NSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIV 380

Query: 351 KVITMQRLFSQVIYTATFLERESGGILVSVDKLKEGHAIIIYRGKNYRR 497
           KVITMQR FSQV+YTA  LE ESGG+LVS+DKLKEGHAIIIYRGKNYRR
Sbjct: 381 KVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRR 429


>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score =  232 bits (592), Expect = 2e-59
 Identities = 114/169 (67%), Positives = 138/169 (81%), Gaps = 4/169 (2%)
 Frame = +3

Query: 3    LTEFRKIQTKLEDIK----EVNVGLEAEIYRLERELRAEQHKAFILNKKIERSTRELSKL 170
            L+EF+ I+T+   +K    E+ V LEAE  RLE+EL+ ++   FIL +KIERS + L+KL
Sbjct: 560  LSEFQNIETEFRGLKDGNTEIEVELEAEKERLEKELKKQERNLFILKRKIERSAKVLAKL 619

Query: 171  NATWTPAEKDIDLEIMTDEERECFRKIGLKMRSCLVLGRRGVFDGVLEGLHQHWKHREVV 350
            N+ W PA+ D D E++T+EERECFRKIG KM S L+LGRRGVFDGV+EGLHQHWKHRE+V
Sbjct: 620  NSAWRPADHDADKEMITEEERECFRKIGQKMDSSLLLGRRGVFDGVIEGLHQHWKHREIV 679

Query: 351  KVITMQRLFSQVIYTATFLERESGGILVSVDKLKEGHAIIIYRGKNYRR 497
            KVITMQR FSQV+YTA  LE ESGG+LVS+DKLKEGHAIIIYRGKNYRR
Sbjct: 680  KVITMQRSFSQVLYTAKLLESESGGVLVSIDKLKEGHAIIIYRGKNYRR 728


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