BLASTX nr result

ID: Glycyrrhiza23_contig00026485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026485
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549280.1| PREDICTED: choline monooxygenase, chloroplas...   465   e-129
gb|AFK38845.1| unknown [Medicago truncatula]                          450   e-124
ref|XP_003610028.1| Choline monooxygenase [Medicago truncatula] ...   445   e-123
ref|XP_002264997.1| PREDICTED: choline monooxygenase, chloroplas...   401   e-109
gb|AFP19450.1| choline monooxygenase [Camellia sinensis]              397   e-108

>ref|XP_003549280.1| PREDICTED: choline monooxygenase, chloroplastic-like [Glycine max]
          Length = 418

 Score =  465 bits (1197), Expect = e-129
 Identities = 220/256 (85%), Positives = 234/256 (91%)
 Frame = -1

Query: 980 GLNGTLLKATRISGMRDFNVNDFGLVPIKVATWGPFVXXXXXXXXXXXXEVDSHNVAKEW 801
           G NG LLKATRISGMR+FNVNDFGL+P+KVATWGPFV            EVDSHNV+KEW
Sbjct: 161 GFNGALLKATRISGMRNFNVNDFGLLPMKVATWGPFVLLNLEKENLSKKEVDSHNVSKEW 220

Query: 800 LGSCSEILSTNGIDSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDS 621
           LGS SEILSTNG+DSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL LDS
Sbjct: 221 LGSSSEILSTNGVDSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLKLDS 280

Query: 620 YLITMFEKVSIQSCEGSSGKSRGNYDRLGREAIYAFVYPNFMINRYGPWMDTNLVLPLGP 441
           Y ITMFE+VSIQSCEGSS K++GNYDRLGR+AIYAFVYPNFMINRYGPWMDTNLV+PLGP
Sbjct: 281 YSITMFERVSIQSCEGSSEKNKGNYDRLGRKAIYAFVYPNFMINRYGPWMDTNLVVPLGP 340

Query: 440 NKCQVVFDYYLEHSLQGDTDFIEKSLQDSEKVQIEDVVLCEGVQKGLQSPAYNVGRYAPK 261
           NKCQV+FDYYLEHSL+ D DFIEKSLQDSEKVQIED+VLCEGVQKGLQSPAY VGRYAP 
Sbjct: 341 NKCQVIFDYYLEHSLKDDKDFIEKSLQDSEKVQIEDIVLCEGVQKGLQSPAYRVGRYAPT 400

Query: 260 VEQAMHHFHCLLYEDL 213
           VEQAMHHFHCLLYE+L
Sbjct: 401 VEQAMHHFHCLLYENL 416


>gb|AFK38845.1| unknown [Medicago truncatula]
          Length = 411

 Score =  450 bits (1157), Expect = e-124
 Identities = 215/258 (83%), Positives = 230/258 (89%)
 Frame = -1

Query: 980 GLNGTLLKATRISGMRDFNVNDFGLVPIKVATWGPFVXXXXXXXXXXXXEVDSHNVAKEW 801
           GLNG LLKATRISGMRDFNVNDFGL+PIKVATWGPFV             VD+HNVA+EW
Sbjct: 157 GLNGNLLKATRISGMRDFNVNDFGLIPIKVATWGPFVLLNFGKEKEE---VDNHNVAEEW 213

Query: 800 LGSCSEILSTNGIDSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDS 621
           LGSC+E+LSTNG+DSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHK LASGLNLDS
Sbjct: 214 LGSCTELLSTNGVDSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKDLASGLNLDS 273

Query: 620 YLITMFEKVSIQSCEGSSGKSRGNYDRLGREAIYAFVYPNFMINRYGPWMDTNLVLPLGP 441
           Y   +FE+VSIQSCEG S KS+ N DRLGR+AIYAF+YPNFMINRYGPWMDTN VLPLGP
Sbjct: 274 YSTKLFERVSIQSCEGGSEKSKENNDRLGRKAIYAFIYPNFMINRYGPWMDTNFVLPLGP 333

Query: 440 NKCQVVFDYYLEHSLQGDTDFIEKSLQDSEKVQIEDVVLCEGVQKGLQSPAYNVGRYAPK 261
           +KCQVVFD+YLE SLQGD DFIEKSLQDSEKVQIED+VL EGVQKGLQSPAY VGRYAPK
Sbjct: 334 SKCQVVFDHYLEPSLQGDRDFIEKSLQDSEKVQIEDIVLSEGVQKGLQSPAYFVGRYAPK 393

Query: 260 VEQAMHHFHCLLYEDLTT 207
           VEQAMHHFHC LYE+LTT
Sbjct: 394 VEQAMHHFHCFLYENLTT 411


>ref|XP_003610028.1| Choline monooxygenase [Medicago truncatula]
           gi|355511083|gb|AES92225.1| Choline monooxygenase
           [Medicago truncatula]
          Length = 429

 Score =  445 bits (1145), Expect = e-123
 Identities = 218/276 (78%), Positives = 233/276 (84%), Gaps = 18/276 (6%)
 Frame = -1

Query: 980 GLNGTLLKATRISGMRDFNVNDFGLVPIKVATWGPFVXXXXXXXXXXXXEVDSHNVAKEW 801
           GLNG LLKATRISGMRDFNVNDFGL+PIKVATWGPFV             VD+HNVA+EW
Sbjct: 157 GLNGNLLKATRISGMRDFNVNDFGLIPIKVATWGPFVLLNFGKEKEE---VDNHNVAEEW 213

Query: 800 LGSCSEILSTNGIDSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDS 621
           LGSC+E+LSTNG+DSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHK LASGLNLDS
Sbjct: 214 LGSCTELLSTNGVDSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKDLASGLNLDS 273

Query: 620 YLITMFEKVSIQSCEGSSGKSRGNYDRLGREAIYAFVYPNFMIN---------------- 489
           Y   +FE+VSIQSCEG S KS+ N DRLGR+AIYAF+YPNFMIN                
Sbjct: 274 YSTKLFERVSIQSCEGGSEKSKENNDRLGRKAIYAFIYPNFMINSCFANQHAFINSGACW 333

Query: 488 --RYGPWMDTNLVLPLGPNKCQVVFDYYLEHSLQGDTDFIEKSLQDSEKVQIEDVVLCEG 315
             RYGPWMDTNLVLPLGP+KCQVVFDYYLE SLQGD DFIEKSLQDSEKVQIED+VL EG
Sbjct: 334 SDRYGPWMDTNLVLPLGPSKCQVVFDYYLEPSLQGDRDFIEKSLQDSEKVQIEDIVLSEG 393

Query: 314 VQKGLQSPAYNVGRYAPKVEQAMHHFHCLLYEDLTT 207
           VQKGLQSPAY+VGRYAPKVEQAMHHFHCLLYE+LTT
Sbjct: 394 VQKGLQSPAYSVGRYAPKVEQAMHHFHCLLYENLTT 429


>ref|XP_002264997.1| PREDICTED: choline monooxygenase, chloroplastic [Vitis vinifera]
           gi|297735449|emb|CBI17889.3| unnamed protein product
           [Vitis vinifera]
          Length = 441

 Score =  401 bits (1030), Expect = e-109
 Identities = 184/257 (71%), Positives = 218/257 (84%)
 Frame = -1

Query: 980 GLNGTLLKATRISGMRDFNVNDFGLVPIKVATWGPFVXXXXXXXXXXXXEVDSHNVAKEW 801
           GL+G LLKATRI+G++DF++N+FGL+P+++ATWGPFV            E DS  V KEW
Sbjct: 184 GLDGALLKATRITGIKDFSINEFGLIPLRIATWGPFVLLNINNDVSPQHEADSKIVGKEW 243

Query: 800 LGSCSEILSTNGIDSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDS 621
           LGS S+ILS  GID+SLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGL L+S
Sbjct: 244 LGSSSDILSNGGIDTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLKLES 303

Query: 620 YLITMFEKVSIQSCEGSSGKSRGNYDRLGREAIYAFVYPNFMINRYGPWMDTNLVLPLGP 441
           Y  T FE+VSIQSCEG  G+S  ++DRLG +A+YAF+YPNFMINRYGPWMDTNLVLPLGP
Sbjct: 304 YSTTTFERVSIQSCEGGPGESEDDFDRLGTKALYAFIYPNFMINRYGPWMDTNLVLPLGP 363

Query: 440 NKCQVVFDYYLEHSLQGDTDFIEKSLQDSEKVQIEDVVLCEGVQKGLQSPAYNVGRYAPK 261
             C+VVFDY+LE SL+ D  FIE+SL+DSE+VQ+ED++LCEGVQ+GL+SPAY  GRYAP 
Sbjct: 364 RTCKVVFDYFLEASLKDDKAFIERSLEDSERVQMEDIILCEGVQRGLESPAYCSGRYAPT 423

Query: 260 VEQAMHHFHCLLYEDLT 210
           VE AMHHFHCLL+E+LT
Sbjct: 424 VEMAMHHFHCLLHENLT 440


>gb|AFP19450.1| choline monooxygenase [Camellia sinensis]
          Length = 434

 Score =  397 bits (1019), Expect = e-108
 Identities = 181/255 (70%), Positives = 215/255 (84%)
 Frame = -1

Query: 977 LNGTLLKATRISGMRDFNVNDFGLVPIKVATWGPFVXXXXXXXXXXXXEVDSHNVAKEWL 798
           L+G LLKATRI+G+R+FNVN+FGL+P+KVA WGPFV              D +N+ KEWL
Sbjct: 179 LDGALLKATRITGIRNFNVNEFGLIPLKVAIWGPFVLLNLEDIPPQQA-ADVNNIGKEWL 237

Query: 797 GSCSEILSTNGIDSSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLNLDSY 618
           GS SEILSTNG+DSSLSY+CRREYTIECNWKVFCDNYLDGGYHVPYAHKGL+SGLNL+SY
Sbjct: 238 GSSSEILSTNGVDSSLSYICRREYTIECNWKVFCDNYLDGGYHVPYAHKGLSSGLNLESY 297

Query: 617 LITMFEKVSIQSCEGSSGKSRGNYDRLGREAIYAFVYPNFMINRYGPWMDTNLVLPLGPN 438
             T FEKVSIQ C+G S ++   Y+RLG +A+YAF+YPNFMINRYGPWMDTNLVLP+G  
Sbjct: 298 STTTFEKVSIQQCDGGSAETENEYERLGSKALYAFIYPNFMINRYGPWMDTNLVLPIGSR 357

Query: 437 KCQVVFDYYLEHSLQGDTDFIEKSLQDSEKVQIEDVVLCEGVQKGLQSPAYNVGRYAPKV 258
           KCQV+FDY+L+ SL+ D  FIE SL+DSE+VQ+ED++LCEGVQ+GL+SPAY  GRYAP V
Sbjct: 358 KCQVIFDYFLDTSLKEDIAFIESSLEDSERVQMEDIILCEGVQRGLESPAYCSGRYAPSV 417

Query: 257 EQAMHHFHCLLYEDL 213
           E+AMHHFHCLLY +L
Sbjct: 418 EKAMHHFHCLLYHNL 432


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