BLASTX nr result

ID: Glycyrrhiza23_contig00026476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026476
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597643.1| 23S rRNA (uracil-5-)-methyltransferase rumA ...   265   2e-69
ref|XP_003542081.1| PREDICTED: uncharacterized RNA methyltransfe...   263   1e-68
ref|XP_003546965.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   252   2e-65
ref|XP_002515896.1| RNA m5u methyltransferase, putative [Ricinus...   238   3e-61
ref|XP_002276511.1| PREDICTED: uncharacterized RNA methyltransfe...   238   4e-61

>ref|XP_003597643.1| 23S rRNA (uracil-5-)-methyltransferase rumA [Medicago truncatula]
           gi|355486691|gb|AES67894.1| 23S rRNA
           (uracil-5-)-methyltransferase rumA [Medicago truncatula]
          Length = 560

 Score =  265 bits (678), Expect = 2e-69
 Identities = 133/160 (83%), Positives = 141/160 (88%)
 Frame = +1

Query: 1   HSHSGFLKHLMLRSGRDVMNGLPEVMVNFVTSSYRPELLKFLVDKISAFPEVVSIMXXXX 180
           HSH GFLKHLMLRSGRDVM GLPEVMVNFVTSSY+P+LLK LVDK+SAFPEVVSIM    
Sbjct: 284 HSHKGFLKHLMLRSGRDVMTGLPEVMVNFVTSSYKPDLLKVLVDKVSAFPEVVSIMNNVN 343

Query: 181 XXXXXXXXXEEEYTSYGKSSITETLRGLTFQISANSFFQTNTYQAEVLYKLIEECAGVRG 360
                    EEEYT +GKSSITETLRGLTFQISANSFFQTNT+QAEVLYKLIEECAG+RG
Sbjct: 344 TSVGNTSVGEEEYTLHGKSSITETLRGLTFQISANSFFQTNTHQAEVLYKLIEECAGIRG 403

Query: 361 DDSEIVLDLFCGTGTIGLTLAKSVKHVYGYEVVPQAITDA 480
           D SE+VLDLFCGTGTIGLTLA+SVKHVYGYEVVPQAI DA
Sbjct: 404 DGSEVVLDLFCGTGTIGLTLARSVKHVYGYEVVPQAIADA 443


>ref|XP_003542081.1| PREDICTED: uncharacterized RNA methyltransferase CT0009-like
           [Glycine max]
          Length = 533

 Score =  263 bits (672), Expect = 1e-68
 Identities = 131/160 (81%), Positives = 140/160 (87%)
 Frame = +1

Query: 1   HSHSGFLKHLMLRSGRDVMNGLPEVMVNFVTSSYRPELLKFLVDKISAFPEVVSIMXXXX 180
           HSH GFLKHLMLR+GRDV    PEVMVNFVTSSY+PELLKFLVDK+S FPEVVS++    
Sbjct: 257 HSHKGFLKHLMLRTGRDVTTDQPEVMVNFVTSSYKPELLKFLVDKVSVFPEVVSVINNVN 316

Query: 181 XXXXXXXXXEEEYTSYGKSSITETLRGLTFQISANSFFQTNTYQAEVLYKLIEECAGVRG 360
                    EEEYT YGKSSITETLRGLTFQISANSFFQTNTYQAEVLYKLIE+CAGV+G
Sbjct: 317 TSVGNTSVGEEEYTLYGKSSITETLRGLTFQISANSFFQTNTYQAEVLYKLIEDCAGVKG 376

Query: 361 DDSEIVLDLFCGTGTIGLTLAKSVKHVYGYEVVPQAITDA 480
           DDSEIVLDLFCGTGTIGLTLA+SV+HVYGYEVVPQAITDA
Sbjct: 377 DDSEIVLDLFCGTGTIGLTLARSVRHVYGYEVVPQAITDA 416


>ref|XP_003546965.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized RNA
           methyltransferase CT0009-like [Glycine max]
          Length = 535

 Score =  252 bits (643), Expect = 2e-65
 Identities = 129/160 (80%), Positives = 137/160 (85%)
 Frame = +1

Query: 1   HSHSGFLKHLMLRSGRDVMNGLPEVMVNFVTSSYRPELLKFLVDKISAFPEVVSIMXXXX 180
           HSH GFLKHLMLR+GRDV    PEVMVNFVTSSY+PELLKFLVDK+S FPEVVS++    
Sbjct: 264 HSHKGFLKHLMLRTGRDVTTYQPEVMVNFVTSSYKPELLKFLVDKVSVFPEVVSVVNNVN 323

Query: 181 XXXXXXXXXEEEYTSYGKSSITETLRGLTFQISANSFFQTNTYQAEVLYKLIEECAGVRG 360
                    EEEYT YGKSSITETLRG TFQISANSFFQTNTYQAEVLYKLIE+CAGVRG
Sbjct: 324 TSVG-----EEEYTLYGKSSITETLRGCTFQISANSFFQTNTYQAEVLYKLIEDCAGVRG 378

Query: 361 DDSEIVLDLFCGTGTIGLTLAKSVKHVYGYEVVPQAITDA 480
           D SEIVLDLFCGTGTIGLTLA+S +HVYGYEVVPQAITDA
Sbjct: 379 DGSEIVLDLFCGTGTIGLTLARSDRHVYGYEVVPQAITDA 418


>ref|XP_002515896.1| RNA m5u methyltransferase, putative [Ricinus communis]
           gi|223544801|gb|EEF46316.1| RNA m5u methyltransferase,
           putative [Ricinus communis]
          Length = 577

 Score =  238 bits (608), Expect = 3e-61
 Identities = 121/160 (75%), Positives = 133/160 (83%)
 Frame = +1

Query: 1   HSHSGFLKHLMLRSGRDVMNGLPEVMVNFVTSSYRPELLKFLVDKISAFPEVVSIMXXXX 180
           HSH GFLKHLMLR+GR+   GL E+MVNFVTS+Y+PELLK +V+KISA PEVVSI+    
Sbjct: 301 HSHDGFLKHLMLRTGRNTETGLLELMVNFVTSAYKPELLKIIVEKISAIPEVVSIVNNVN 360

Query: 181 XXXXXXXXXEEEYTSYGKSSITETLRGLTFQISANSFFQTNTYQAEVLYKLIEECAGVRG 360
                    EEEYT YGKS+ITE LRGLTFQISANSFFQTNT QAEVLYKLIE+CAG+RG
Sbjct: 361 SSVGNTSVGEEEYTIYGKSTITEILRGLTFQISANSFFQTNTRQAEVLYKLIEDCAGLRG 420

Query: 361 DDSEIVLDLFCGTGTIGLTLAKSVKHVYGYEVVPQAITDA 480
           D SEIVLDLFCGTGTIGLTLA   KHVYGYEVVPQAI+DA
Sbjct: 421 DGSEIVLDLFCGTGTIGLTLAGRAKHVYGYEVVPQAISDA 460


>ref|XP_002276511.1| PREDICTED: uncharacterized RNA methyltransferase CT0009 [Vitis
           vinifera] gi|297743126|emb|CBI35993.3| unnamed protein
           product [Vitis vinifera]
          Length = 570

 Score =  238 bits (607), Expect = 4e-61
 Identities = 118/160 (73%), Positives = 136/160 (85%)
 Frame = +1

Query: 1   HSHSGFLKHLMLRSGRDVMNGLPEVMVNFVTSSYRPELLKFLVDKISAFPEVVSIMXXXX 180
           HSH GFLKHL+LR+GRD+  GLPE+MVNFVTSSY+PELLK LV+KISA PEVVSI+    
Sbjct: 294 HSHDGFLKHLVLRTGRDIKTGLPELMVNFVTSSYKPELLKPLVEKISAIPEVVSIVNNIN 353

Query: 181 XXXXXXXXXEEEYTSYGKSSITETLRGLTFQISANSFFQTNTYQAEVLYKLIEECAGVRG 360
                    E+EY  +GKS+ITE LRGLTFQISANSFFQTNT+QAEVLYKLIE+CAG+RG
Sbjct: 354 TSVGSTSVGEQEYILHGKSAITEILRGLTFQISANSFFQTNTHQAEVLYKLIEDCAGLRG 413

Query: 361 DDSEIVLDLFCGTGTIGLTLAKSVKHVYGYEVVPQAITDA 480
           D SEIVLDLFCGTGTIGLTL++ V+HVYGYEVV QA++DA
Sbjct: 414 DGSEIVLDLFCGTGTIGLTLSRRVRHVYGYEVVAQAVSDA 453


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