BLASTX nr result

ID: Glycyrrhiza23_contig00026471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026471
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-l...   149   3e-34
ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-l...   147   7e-34
ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi...   114   6e-24
ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...   111   5e-23

>ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 514

 Score =  149 bits (375), Expect = 3e-34
 Identities = 76/115 (66%), Positives = 78/115 (67%), Gaps = 12/115 (10%)
 Frame = +3

Query: 150 MAEHSSAAVNDGEPESQLXXXXXXXXXXXXXXXX------------SSDPELFCCLLQPA 293
           M E  SAAVNDGEPE Q                             +SDPELFCCLLQPA
Sbjct: 1   MDEQKSAAVNDGEPEPQQNHHQQNHTDNNNNKSNDTENNNNDNEKSTSDPELFCCLLQPA 60

Query: 294 TADADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYVGYRNYICRPRNWERESL 458
           T D DPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYV YRNYI RPRNWER+SL
Sbjct: 61  TTDGDPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYVAYRNYISRPRNWERDSL 115


>ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 553

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/107 (69%), Positives = 79/107 (73%), Gaps = 4/107 (3%)
 Frame = +3

Query: 150 MAEHSSAAVNDGEPESQLXXXXXXXXXXXXXXXXS----SDPELFCCLLQPATADADPEY 317
           MAE +SAA NDGEPE +                 +    SDPELFCCLLQPATA+ DPEY
Sbjct: 1   MAEQTSAAFNDGEPEPRQNEHHQNHNNNKSNDTDNERSTSDPELFCCLLQPATAEGDPEY 60

Query: 318 IGIRRLLLHRKAEAGVLRRRDWRCNGKTYVGYRNYICRPRNWERESL 458
           IGIRRLLL RKAEAGVLRRRDWRCNGKTYV YRNYI RPRNWER+SL
Sbjct: 61  IGIRRLLLSRKAEAGVLRRRDWRCNGKTYVAYRNYISRPRNWERDSL 107


>ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547972|gb|EEF49464.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 500

 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/67 (74%), Positives = 57/67 (85%)
 Frame = +3

Query: 258 DPELFCCLLQPATADADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYVGYRNYICRPR 437
           DPELF CLLQP T D+DPEYIGIRRLLL+RK+++GV RR DWRCNGK YV YRNYI RPR
Sbjct: 39  DPELFSCLLQPVTTDSDPEYIGIRRLLLYRKSDSGVNRRLDWRCNGKGYVSYRNYIRRPR 98

Query: 438 NWERESL 458
           NWE + +
Sbjct: 99  NWENQQI 105


>ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  112 bits (280), Expect = 3e-23
 Identities = 49/63 (77%), Positives = 55/63 (87%)
 Frame = +3

Query: 258 DPELFCCLLQPATADADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYVGYRNYICRPR 437
           DPELF CLLQP T+D+DP+YIGIRRLLL+RKAE+GV RR DWRCNGK Y  YRNYI RPR
Sbjct: 47  DPELFSCLLQPVTSDSDPDYIGIRRLLLYRKAESGVRRRLDWRCNGKGYTSYRNYIRRPR 106

Query: 438 NWE 446
           NW+
Sbjct: 107 NWD 109


>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score =  111 bits (278), Expect = 5e-23
 Identities = 49/63 (77%), Positives = 55/63 (87%)
 Frame = +3

Query: 258 DPELFCCLLQPATADADPEYIGIRRLLLHRKAEAGVLRRRDWRCNGKTYVGYRNYICRPR 437
           DP  F CLLQP++AD+DP+YIGIRRLLL RKAE+GV RR+DWRCNGK YV YRNYI RPR
Sbjct: 21  DPTFFSCLLQPSSADSDPQYIGIRRLLLRRKAESGVHRRKDWRCNGKGYVAYRNYIRRPR 80

Query: 438 NWE 446
           NWE
Sbjct: 81  NWE 83


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