BLASTX nr result

ID: Glycyrrhiza23_contig00026385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026385
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527712.1| PREDICTED: uncharacterized protein LOC100782...   165   4e-39
ref|XP_003602994.1| Gamma-tubulin complex component 4 [Medicago ...   160   8e-38
ref|XP_002282254.1| PREDICTED: uncharacterized protein LOC100247...   123   1e-26
emb|CAN72176.1| hypothetical protein VITISV_012536 [Vitis vinifera]   123   1e-26
ref|XP_002329950.1| tubulin gamma complex-associated protein [Po...   109   2e-22

>ref|XP_003527712.1| PREDICTED: uncharacterized protein LOC100782299 [Glycine max]
          Length = 1002

 Score =  165 bits (417), Expect = 4e-39
 Identities = 84/103 (81%), Positives = 95/103 (92%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   EMFFFANKEISVDEAEFWEKSYLLRILQHSKLDAD-FASTNYISNSVPASHDKKEMGRRD 179
           EMFFF NKE+SVDEAEFWEKSYLLR LQHSKLD++ F+STNY+++SVPAS+D KEM RRD
Sbjct: 251 EMFFFTNKEVSVDEAEFWEKSYLLRRLQHSKLDSEFFSSTNYVNDSVPASND-KEMDRRD 309

Query: 180 SISLSNTIKGKEQSIRDCPACPFFIKDLAKSIISAGKSLQLMR 308
           SISLS+T+KGKE SIRD PACPFFIKDL KSI+SAGKSLQLMR
Sbjct: 310 SISLSSTVKGKEPSIRDRPACPFFIKDLTKSIVSAGKSLQLMR 352


>ref|XP_003602994.1| Gamma-tubulin complex component 4 [Medicago truncatula]
           gi|355492042|gb|AES73245.1| Gamma-tubulin complex
           component 4 [Medicago truncatula]
          Length = 1076

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/102 (76%), Positives = 90/102 (88%)
 Frame = +3

Query: 3   EMFFFANKEISVDEAEFWEKSYLLRILQHSKLDADFASTNYISNSVPASHDKKEMGRRDS 182
           +MFFFANKE+SV EAEFWEKS L+R LQH K D + +ST Y  +S+PAS++KKEMG RDS
Sbjct: 251 QMFFFANKEVSVAEAEFWEKSCLIRKLQHRKSDTELSSTIYAGDSIPASNEKKEMGMRDS 310

Query: 183 ISLSNTIKGKEQSIRDCPACPFFIKDLAKSIISAGKSLQLMR 308
           ISLS+TIKGK+QS+RDCPACP FIKDLAKSIISAGKSLQLMR
Sbjct: 311 ISLSSTIKGKDQSVRDCPACPLFIKDLAKSIISAGKSLQLMR 352


>ref|XP_002282254.1| PREDICTED: uncharacterized protein LOC100247210 [Vitis vinifera]
          Length = 1023

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/102 (60%), Positives = 81/102 (79%)
 Frame = +3

Query: 3   EMFFFANKEISVDEAEFWEKSYLLRILQHSKLDADFASTNYISNSVPASHDKKEMGRRDS 182
           EMFF+ANK IS+DEAEFWEKSYLLR LQ   LD + ++    S+ +P+++DKKEM  R+S
Sbjct: 265 EMFFYANKTISIDEAEFWEKSYLLRPLQ--SLDVELSAMIGTSSRLPSTNDKKEMAGRES 322

Query: 183 ISLSNTIKGKEQSIRDCPACPFFIKDLAKSIISAGKSLQLMR 308
           IS S+++KGKEQS +D   CP F++D+AK IISAGKSLQL+R
Sbjct: 323 ISTSSSMKGKEQSSKDLKLCPLFVEDIAKPIISAGKSLQLIR 364


>emb|CAN72176.1| hypothetical protein VITISV_012536 [Vitis vinifera]
          Length = 740

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/102 (60%), Positives = 81/102 (79%)
 Frame = +3

Query: 3   EMFFFANKEISVDEAEFWEKSYLLRILQHSKLDADFASTNYISNSVPASHDKKEMGRRDS 182
           EMFF+ANK IS+DEAEFWEKSYLLR LQ   LD + ++    S+ +P+++DKKEM  R+S
Sbjct: 263 EMFFYANKTISIDEAEFWEKSYLLRPLQ--SLDVELSAMIGTSSRLPSTNDKKEMAGRES 320

Query: 183 ISLSNTIKGKEQSIRDCPACPFFIKDLAKSIISAGKSLQLMR 308
           IS S+++KGKEQS +D   CP F++D+AK IISAGKSLQL+R
Sbjct: 321 ISTSSSMKGKEQSSKDLKLCPLFVEDIAKPIISAGKSLQLIR 362


>ref|XP_002329950.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222871972|gb|EEF09103.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 977

 Score =  109 bits (273), Expect = 2e-22
 Identities = 56/102 (54%), Positives = 75/102 (73%)
 Frame = +3

Query: 3   EMFFFANKEISVDEAEFWEKSYLLRILQHSKLDADFASTNYISNSVPASHDKKEMGRRDS 182
           EMFF+AN+ ISVD++EFWEKSY LR LQ  KLD        I++S+P S++K  MG +DS
Sbjct: 244 EMFFYANRAISVDKSEFWEKSYQLRRLQCRKLD--------INSSIPLSNNKTGMGEKDS 295

Query: 183 ISLSNTIKGKEQSIRDCPACPFFIKDLAKSIISAGKSLQLMR 308
           I  S   KGKE ++++   CP FIK+++KSI+SAGKSLQL+R
Sbjct: 296 IPFSEFKKGKELNVKELLVCPLFIKEISKSIVSAGKSLQLIR 337


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