BLASTX nr result

ID: Glycyrrhiza23_contig00026321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026321
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556332.1| PREDICTED: structural maintenance of chromos...   219   2e-55
ref|XP_003613413.1| Structural maintenance of chromosomes protei...   188   3e-46
ref|XP_004135946.1| PREDICTED: structural maintenance of chromos...   180   1e-43
ref|XP_002272410.1| PREDICTED: structural maintenance of chromos...   177   1e-42
ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5...   175   3e-42

>ref|XP_003556332.1| PREDICTED: structural maintenance of chromosomes protein 5-like
           [Glycine max]
          Length = 1059

 Score =  219 bits (557), Expect = 2e-55
 Identities = 102/123 (82%), Positives = 114/123 (92%)
 Frame = +3

Query: 3   HALQKSGVEKIFEAYKWVQEHRHEFNKEVYGPVLVEVNVSDRQHAAYLEGQVARYTWKSF 182
           HALQ+SG EKIFEAYKWVQ+HRHEFNKEVYGPVL+EVNVS++ HAAYLEGQVA YTWKSF
Sbjct: 426 HALQRSGAEKIFEAYKWVQDHRHEFNKEVYGPVLLEVNVSNKDHAAYLEGQVAHYTWKSF 485

Query: 183 ITQDSGDRDLLVKNLQFYDVPVLNYTGGDGHRREPFEVSKDMRTRGIYSRLDQIFDAPVA 362
           ITQDSGDRDLL K+L+F+DV VLNYTGGDG +REPFE+S+D R  GIYSRLDQIFDAP+A
Sbjct: 486 ITQDSGDRDLLAKHLRFFDVNVLNYTGGDGPQREPFEISEDKRALGIYSRLDQIFDAPIA 545

Query: 363 VKE 371
           VKE
Sbjct: 546 VKE 548


>ref|XP_003613413.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355514748|gb|AES96371.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 750

 Score =  188 bits (478), Expect = 3e-46
 Identities = 92/122 (75%), Positives = 102/122 (83%)
 Frame = +3

Query: 6   ALQKSGVEKIFEAYKWVQEHRHEFNKEVYGPVLVEVNVSDRQHAAYLEGQVARYTWKSFI 185
           AL+ SGV++IFEA KWVQEHRHEF+KEVYGPVLVEVNV D+ HA YLEGQ+A YTWKSFI
Sbjct: 72  ALKNSGVKEIFEAEKWVQEHRHEFHKEVYGPVLVEVNVPDQSHAKYLEGQLAWYTWKSFI 131

Query: 186 TQDSGDRDLLVKNLQFYDVPVLNYTGGDGHRREPFEVSKDMRTRGIYSRLDQIFDAPVAV 365
           TQD  DRD LV NLQ YDVPVLNYTG D  +REP E+S +MR  GI+ RLDQIFDAP AV
Sbjct: 132 TQDPRDRDFLVNNLQHYDVPVLNYTGRDSQQREPSEISPEMRAIGIHFRLDQIFDAPDAV 191

Query: 366 KE 371
           KE
Sbjct: 192 KE 193


>ref|XP_004135946.1| PREDICTED: structural maintenance of chromosomes protein 5-like
           [Cucumis sativus]
          Length = 1053

 Score =  180 bits (456), Expect = 1e-43
 Identities = 85/122 (69%), Positives = 99/122 (81%)
 Frame = +3

Query: 6   ALQKSGVEKIFEAYKWVQEHRHEFNKEVYGPVLVEVNVSDRQHAAYLEGQVARYTWKSFI 185
           AL+ SG EKIFEAY W+QEHRHEF KEVYGPVL+EVNVS+R HA YLEG +  Y WKSFI
Sbjct: 428 ALKNSGTEKIFEAYHWLQEHRHEFKKEVYGPVLLEVNVSNRTHADYLEGHIPSYVWKSFI 487

Query: 186 TQDSGDRDLLVKNLQFYDVPVLNYTGGDGHRREPFEVSKDMRTRGIYSRLDQIFDAPVAV 365
           TQDS DRD++VKNL  + VPVLNY GG+    + FE+S+++R  GIYSRLDQIFDAP AV
Sbjct: 488 TQDSHDRDIMVKNLGSFGVPVLNYVGGERRTNQHFELSEEVRAFGIYSRLDQIFDAPAAV 547

Query: 366 KE 371
           KE
Sbjct: 548 KE 549


>ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis
           vinifera] gi|297736324|emb|CBI24962.3| unnamed protein
           product [Vitis vinifera]
          Length = 1051

 Score =  177 bits (448), Expect = 1e-42
 Identities = 83/122 (68%), Positives = 97/122 (79%)
 Frame = +3

Query: 6   ALQKSGVEKIFEAYKWVQEHRHEFNKEVYGPVLVEVNVSDRQHAAYLEGQVARYTWKSFI 185
           ALQ SG EKIFEAY W+QEHRHE NK+VYGPVL+EVNVS R HA YLEG +  Y WKSFI
Sbjct: 426 ALQNSGAEKIFEAYHWLQEHRHELNKDVYGPVLLEVNVSHRIHADYLEGHIPYYIWKSFI 485

Query: 186 TQDSGDRDLLVKNLQFYDVPVLNYTGGDGHRREPFEVSKDMRTRGIYSRLDQIFDAPVAV 365
           TQD  DRD LVKNL+ +DVPVLNY   +   +EPF++S++MR  GI SRLDQ+FD+P AV
Sbjct: 486 TQDPDDRDFLVKNLRLFDVPVLNYVRNEDRHKEPFQISEEMRKLGISSRLDQVFDSPDAV 545

Query: 366 KE 371
           KE
Sbjct: 546 KE 547


>ref|XP_002517770.1| structural maintenance of chromosomes 5 smc5, putative [Ricinus
           communis] gi|223543042|gb|EEF44577.1| structural
           maintenance of chromosomes 5 smc5, putative [Ricinus
           communis]
          Length = 1057

 Score =  175 bits (444), Expect = 3e-42
 Identities = 83/122 (68%), Positives = 98/122 (80%)
 Frame = +3

Query: 6   ALQKSGVEKIFEAYKWVQEHRHEFNKEVYGPVLVEVNVSDRQHAAYLEGQVARYTWKSFI 185
           AL+ SG EKIF+AYKWV++HR+E   EVYGPVL+EVNVSDR HA YLEGQV  Y WKSFI
Sbjct: 434 ALRNSGAEKIFDAYKWVEQHRNELKAEVYGPVLLEVNVSDRMHADYLEGQVPYYIWKSFI 493

Query: 186 TQDSGDRDLLVKNLQFYDVPVLNYTGGDGHRREPFEVSKDMRTRGIYSRLDQIFDAPVAV 365
           TQD  DRD+LVKNL+ +DVP+LNY   + H +E F+VS+ M   GIYSRLDQ+FDAP AV
Sbjct: 494 TQDPTDRDVLVKNLKAFDVPILNYVRDESHPKEAFQVSEKMHELGIYSRLDQVFDAPHAV 553

Query: 366 KE 371
           KE
Sbjct: 554 KE 555


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