BLASTX nr result

ID: Glycyrrhiza23_contig00026318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026318
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601137.1| Auxin response factor [Medicago truncatula] ...   450   e-124
ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793...   424   e-116
ref|XP_002513844.1| Auxin response factor, putative [Ricinus com...   386   e-105
ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin respon...   354   2e-95
ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arab...   353   4e-95

>ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
            gi|355490185|gb|AES71388.1| Auxin response factor
            [Medicago truncatula]
          Length = 593

 Score =  450 bits (1157), Expect = e-124
 Identities = 219/322 (68%), Positives = 249/322 (77%), Gaps = 4/322 (1%)
 Frame = +2

Query: 2    NGGGFSVPRFCADSIFPALDFQADPPVQNLSITDVHGVSWEFRHIYRGTPRRHLLTTGWS 181
            NGGGFSVPRFCADSIFP LD+  DPP+QNL ITDVHG++WEFRHIYRGTPRRHLLTTGWS
Sbjct: 128  NGGGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTGWS 187

Query: 182  KFVNSKKLVAGDSVVFMKNSRGEMFVGIRRATRFASSGSSN---SDGPRWCFPLSGVRNR 352
            KFVN+KKLVAGDSVVFMKN+RG MF+GIRRA RF  + +S+   SD  R C P+ GVR+R
Sbjct: 188  KFVNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTSSGVCSDVSRLCLPICGVRSR 247

Query: 353  VXXXXXXXXXXXXKCKEGFSRNGKGXXXXXXXXXXXXXXXKNMPFEVVYYPKAAWSDFVV 532
            V              ++ FSR+GKG               + M FEVVYYP+A WSDFV+
Sbjct: 248  VDDEEKLVE------EKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSDFVL 301

Query: 533  KAEVVDEAMSVVWSPGMRVKMAVEADDSSRMTWFQGVVSSVAVPDVGPWKGSPWRMLQVT 712
            KAEVVD AMSV W PGMR+KMAVE DDSSR TWFQGVVS V+VPD G W+GSPWRML +T
Sbjct: 302  KAEVVDAAMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHGAWRGSPWRMLHIT 361

Query: 713  WDEPDMCQNSKWVSPWQVELVSTTPALHTAFPPMKRFKAAQG-SGDGEGDPFSMTGFTNS 889
            WDEP++ Q SKWVSPWQVEL+STTP+LHT FPP+KR +   G   DG+GDPFS+TGFTNS
Sbjct: 362  WDEPEVLQTSKWVSPWQVELLSTTPSLHTPFPPLKRTRGVSGVLTDGDGDPFSITGFTNS 421

Query: 890  TMGHLNQTLLSYGTFPAGMQGA 955
            T G LNQ LLSY TFPAGMQGA
Sbjct: 422  TTGQLNQPLLSYSTFPAGMQGA 443


>ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
          Length = 1160

 Score =  424 bits (1089), Expect = e-116
 Identities = 213/321 (66%), Positives = 238/321 (74%), Gaps = 3/321 (0%)
 Frame = +2

Query: 2    NGGGFSVPRFCADSIFPALDFQADPPVQNLSITDVHGVSWEFRHIYRGTPRRHLLTTGWS 181
            NGGGFSVPRFCADSIFP L+FQADPPVQNL +TDVHG  WEFRHIYRGTPRRHLLTTGWS
Sbjct: 134  NGGGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHLLTTGWS 193

Query: 182  KFVNSKKLVAGDSVVFMKNSRGEMFVGIRRATRFASSGSSNSDGPRWCFPLSGVRNRVXX 361
             FVN+KKLVAGD VVFMKNS G +FVGIRRATRF+     +  G R       +R     
Sbjct: 194  TFVNNKKLVAGDVVVFMKNSGGGLFVGIRRATRFSMGKGGDRGGMR-------IRVDEEE 246

Query: 362  XXXXXXXXXXKCKEGFSRNGKGXXXXXXXXXXXXXXXKNMPFEVVYYPKAAWSDFVVKAE 541
                      + +E FSR+G+G               +NMPFEVVYYPK  WS+FVVK E
Sbjct: 247  EEEEEEEEEEEVREVFSRDGRGKLSAKVVAEAAELAARNMPFEVVYYPKERWSEFVVKTE 306

Query: 542  VVDEAMSVVWSPGMRVKMAVEADDSSRMTWFQGVVSSVAVPDVGPWKGSPWRMLQVTWDE 721
             V+EAM V WSPG+RVK+A E DDSSR++W QG VSSVA+   G W+GS WRMLQVTWDE
Sbjct: 307  AVNEAMKVAWSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQWRGSLWRMLQVTWDE 366

Query: 722  PDMCQNSKWVSPWQVELVSTTPALHTAFPPMKRFKAAQGSG---DGEGDPFSMTGFTNST 892
            P+  Q +KWVSPWQVELVSTTPALH+AFPP+KR KAA  SG   +GE DPF MTGFTNST
Sbjct: 367  PEGLQIAKWVSPWQVELVSTTPALHSAFPPIKRIKAAHDSGVFTNGERDPFPMTGFTNST 426

Query: 893  MGHLNQTLLSYGTFPAGMQGA 955
            MG LNQ LLSYGTFPAGMQGA
Sbjct: 427  MGQLNQALLSYGTFPAGMQGA 447


>ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
            gi|223546930|gb|EEF48427.1| Auxin response factor,
            putative [Ricinus communis]
          Length = 603

 Score =  386 bits (992), Expect = e-105
 Identities = 192/324 (59%), Positives = 238/324 (73%), Gaps = 6/324 (1%)
 Frame = +2

Query: 2    NGGGFSVPRFCADSIFPALDFQADPPVQNLSITDVHGVSWEFRHIYRGTPRRHLLTTGWS 181
            NGGGFSVPRFCADSIFP L++ A+PPVQ L++TD+HG++W+FRHIYRGTPRRHLLTTGWS
Sbjct: 141  NGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDFRHIYRGTPRRHLLTTGWS 200

Query: 182  KFVNSKKLVAGDSVVFMKNSRGEMFVGIRRATRFASSGSSNSDGPRWCFPLSGVRNRVXX 361
            KFVN KKL+AGDSVVFM+N  G+MF+G+RRA R  + G   SD  RW       R ++  
Sbjct: 201  KFVNHKKLIAGDSVVFMRNMTGKMFIGVRRAVRPNNGG---SDCARW-------REQIAC 250

Query: 362  XXXXXXXXXXKCK-EGFSRNGKGXXXXXXXXXXXXXXXKNMPFEVVYYPKAAW-SDFVVK 535
                      K K EG+SRNG+G               +   FEVVYYP+A W SDFVV+
Sbjct: 251  FGGGGGDVKMKVKEEGYSRNGRGKVSPEAVMEAVERAAQGFSFEVVYYPRAGWYSDFVVR 310

Query: 536  AEVVDEAMSVVWSPGMRVKMAVEADDSSRMTWFQGVVSSVAVPDVGPWKGSPWRMLQVTW 715
             +VVD A++V WS GMRVKMA+E +DSSRMTWFQG ++S ++PD G W+GSPWRMLQV W
Sbjct: 311  TDVVDGALAVCWSAGMRVKMAMETEDSSRMTWFQGTIASASLPDCGLWRGSPWRMLQVAW 370

Query: 716  DEPDMCQNSKWVSPWQVELVSTTPALHTAFPPMKRFKAAQGSG---DGEGDP-FSMTGFT 883
            DEP++ QN+K VSPWQVE VS +P LH AFPP K+F+  + SG   DGEG+  F M+G T
Sbjct: 371  DEPEVLQNAKRVSPWQVEYVSPSPPLHGAFPPAKKFRFPENSGFLTDGEGELFFPMSGLT 430

Query: 884  NSTMGHLNQTLLSYGTFPAGMQGA 955
            NSTMG++NQ+ L+Y +FPAGMQGA
Sbjct: 431  NSTMGNINQS-LNYHSFPAGMQGA 453


>ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like [Vitis
            vinifera]
          Length = 593

 Score =  354 bits (908), Expect = 2e-95
 Identities = 188/322 (58%), Positives = 218/322 (67%), Gaps = 4/322 (1%)
 Frame = +2

Query: 2    NGGGFSVPRFCADSIFPALDFQADPPVQNLSITDVHGVSWEFRHIYRGTPRRHLLTTGWS 181
            NGGGFSVPRFCAD IFP L+FQADPPVQ+L  TD+ G  W+FRHIYRGTPRRHLLTTGWS
Sbjct: 131  NGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRHLLTTGWS 190

Query: 182  KFVNSKKLVAGDSVVFMK-NSRGEMFVGIRRATRFASSGSSNSDGPRWCFPLSGVRNRVX 358
            KFVN KKLVAGDSVVFMK NS  E+F+G+RR  R+      N +G RW F  S +   V 
Sbjct: 191  KFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARW------NRNGERWSFR-SALAGAVK 243

Query: 359  XXXXXXXXXXXKCKEGFSRNGKGXXXXXXXXXXXXXXXKNMPFEVVYYPKAAWSDFVVKA 538
                          EGFSR+  G               + MPFEVVYYP+   SDFVVKA
Sbjct: 244  AKEVGSI-------EGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVKA 296

Query: 539  EVVDEAMSVVWSPGMRVKMAVEADDSSRMTWFQGVVSSVAVPDVGPWKGSPWRMLQVTWD 718
            EVV+EA+SV W+ GMRVKMA+E +DSS+ + FQG VSS  V D GPW+GS WRMLQVTWD
Sbjct: 297  EVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQVTWD 356

Query: 719  EPDMCQNSKWVSPWQVELVSTTPALHTAFPPMKRFKAAQG---SGDGEGDPFSMTGFTNS 889
            EP++ QN   VSPWQVELV  TP  HT  PP KRF+ AQ      DGEG+ F      ++
Sbjct: 357  EPEVLQNVMRVSPWQVELVMPTPPFHTTPPPAKRFRIAQSPELPSDGEGEIF--FPMADT 414

Query: 890  TMGHLNQTLLSYGTFPAGMQGA 955
             MG LN +LL++ TFPAGMQGA
Sbjct: 415  VMGILNPSLLNHNTFPAGMQGA 436


>ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
            lyrata] gi|297333544|gb|EFH63962.1| hypothetical protein
            ARALYDRAFT_895674 [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  353 bits (905), Expect = 4e-95
 Identities = 175/322 (54%), Positives = 211/322 (65%), Gaps = 4/322 (1%)
 Frame = +2

Query: 2    NGGGFSVPRFCADSIFPALDFQADPPVQNLSITDVHGVSWEFRHIYRGTPRRHLLTTGWS 181
            NGGGFSVPRFCADS+FP LDFQ DPPVQ L ITD+HG  W+FRHIYRGTPRRHLLTTGWS
Sbjct: 130  NGGGFSVPRFCADSVFPPLDFQIDPPVQKLYITDIHGAVWDFRHIYRGTPRRHLLTTGWS 189

Query: 182  KFVNSKKLVAGDSVVFMKNSRGEMFVGIRRATRFASSGSSNSDGPRWCFPLSGVRNRVXX 361
            KFVNSKKL+AGDSVVFMK +  EMF+G+RR    +S G S+  G           N    
Sbjct: 190  KFVNSKKLIAGDSVVFMKKAADEMFMGVRRTPISSSGGGSSYYG-------GDEYNGYYS 242

Query: 362  XXXXXXXXXXKCKEGFSRNGKGXXXXXXXXXXXXXXXKNMPFEVVYYPKAAWSDFVVKAE 541
                        K+ F R+GKG               K +PFEV YYP A WS+FVV+AE
Sbjct: 243  QSSVAKEDDGSAKKTFRRSGKGKLTAEAVTEAINRAAKGLPFEVAYYPTAGWSEFVVRAE 302

Query: 542  VVDEAMSVVWSPGMRVKMAVEADDSSRMTWFQGVVSSVAVPDVGPWKGSPWRMLQVTWDE 721
             V+ +MSV W+PG RVKMA+E +DSSR+TWFQG+VSS    + GPW+GSPW+ LQ+TWDE
Sbjct: 303  DVESSMSVFWTPGTRVKMAMETEDSSRITWFQGIVSS-TYQETGPWRGSPWKQLQITWDE 361

Query: 722  PDMCQNSKWVSPWQVELVSTTPALHTAFPPMKRFKAAQGSGDGEGD----PFSMTGFTNS 889
            P++ QN K V+PWQVE+V+    LH  FPP KR K  Q  G   GD    P+S  G +++
Sbjct: 362  PEILQNVKRVNPWQVEIVANATQLHATFPPAKRLKYPQPGGFLSGDDGDIPYSQRGLSSA 421

Query: 890  TMGHLNQTLLSYGTFPAGMQGA 955
                 +  +  Y TFPAGMQGA
Sbjct: 422  AAPDPSPYMFPYSTFPAGMQGA 443


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