BLASTX nr result

ID: Glycyrrhiza23_contig00026316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026316
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   208   3e-52
ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula] ...   202   3e-50
ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   192   3e-47
ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   191   7e-47
ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula] ...   186   1e-45

>ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 931

 Score =  208 bits (530), Expect = 3e-52
 Identities = 104/116 (89%), Positives = 108/116 (93%)
 Frame = +3

Query: 3   LMHIYRKEFTAIGGYLTDAGEVFLDRVERFIQSVAVHEDQIFQKRVRIQQVAENNEEMRA 182
           LMHIYRKEFTAIGGYLTDAGEVFLDRV+RFIQ V VHEDQIFQKRVRIQ  AENNEEMRA
Sbjct: 358 LMHIYRKEFTAIGGYLTDAGEVFLDRVQRFIQFVTVHEDQIFQKRVRIQLAAENNEEMRA 417

Query: 183 RAKGVMPEEPRASLVDKVKLGETGYKERYYAEKFGVSNLDEIDKIKKDIVLKYVEG 350
           RA+G MP EPRASL+DKVKLGE GYKERYY EKFGVSNL+EIDKIKKDIVLKYVEG
Sbjct: 418 RARGEMPGEPRASLLDKVKLGEPGYKERYYVEKFGVSNLEEIDKIKKDIVLKYVEG 473


>ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula]
           gi|355480081|gb|AES61284.1| 5'-3' exoribonuclease
           [Medicago truncatula]
          Length = 1029

 Score =  202 bits (513), Expect = 3e-50
 Identities = 100/116 (86%), Positives = 108/116 (93%)
 Frame = +3

Query: 3   LMHIYRKEFTAIGGYLTDAGEVFLDRVERFIQSVAVHEDQIFQKRVRIQQVAENNEEMRA 182
           LMHIYRKEFTA+GGYLT AGEVFLDRVE FIQSVAVHEDQIFQKRVR+QQVAENNEEMRA
Sbjct: 357 LMHIYRKEFTAMGGYLTYAGEVFLDRVEYFIQSVAVHEDQIFQKRVRVQQVAENNEEMRA 416

Query: 183 RAKGVMPEEPRASLVDKVKLGETGYKERYYAEKFGVSNLDEIDKIKKDIVLKYVEG 350
           R +GV+ +EPRAS  DKVKLGE GYKERYYAEKFG S+L+EIDK+KKDIVLKYVEG
Sbjct: 417 RVRGVILQEPRASFSDKVKLGEPGYKERYYAEKFGASSLEEIDKVKKDIVLKYVEG 472


>ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 957

 Score =  192 bits (487), Expect = 3e-47
 Identities = 95/116 (81%), Positives = 105/116 (90%)
 Frame = +3

Query: 3   LMHIYRKEFTAIGGYLTDAGEVFLDRVERFIQSVAVHEDQIFQKRVRIQQVAENNEEMRA 182
           LMHIYRKEFTA+GGYLT+AGEVFL+RVE FIQSVAVHEDQIFQKRVRIQQ  E NEEM+A
Sbjct: 363 LMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFQKRVRIQQATEINEEMKA 422

Query: 183 RAKGVMPEEPRASLVDKVKLGETGYKERYYAEKFGVSNLDEIDKIKKDIVLKYVEG 350
           RA+G MP EPRAS++DKVKLGE GYKERYYAEKFG  + ++IDKIKKD VLKYVEG
Sbjct: 423 RARGDMPGEPRASVLDKVKLGEPGYKERYYAEKFGALDPEKIDKIKKDTVLKYVEG 478


>ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 960

 Score =  191 bits (484), Expect = 7e-47
 Identities = 94/116 (81%), Positives = 105/116 (90%)
 Frame = +3

Query: 3   LMHIYRKEFTAIGGYLTDAGEVFLDRVERFIQSVAVHEDQIFQKRVRIQQVAENNEEMRA 182
           LMHIYRKEFTA+GGYLT+AGEVFL+RVE FIQSVAVHEDQIF KRVRIQQ  E NEEM+A
Sbjct: 365 LMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFLKRVRIQQATEINEEMKA 424

Query: 183 RAKGVMPEEPRASLVDKVKLGETGYKERYYAEKFGVSNLDEIDKIKKDIVLKYVEG 350
           RA+G MP EPRAS++DKVKLGE GYKERYYAEKFG  +L++I+KIKKD VLKYVEG
Sbjct: 425 RARGEMPGEPRASVLDKVKLGEPGYKERYYAEKFGALDLEKIEKIKKDTVLKYVEG 480


>ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula]
           gi|355501406|gb|AES82609.1| 5'-3' exoribonuclease
           [Medicago truncatula]
          Length = 629

 Score =  186 bits (473), Expect = 1e-45
 Identities = 95/116 (81%), Positives = 104/116 (89%)
 Frame = +3

Query: 3   LMHIYRKEFTAIGGYLTDAGEVFLDRVERFIQSVAVHEDQIFQKRVRIQQVAENNEEMRA 182
           LMHIYRKEFTA+GGYLTDAGEVFL+RVE FIQ VAVHE+QIFQKRVRIQQ  E NE MRA
Sbjct: 364 LMHIYRKEFTAMGGYLTDAGEVFLERVENFIQCVAVHEEQIFQKRVRIQQSQEFNEGMRA 423

Query: 183 RAKGVMPEEPRASLVDKVKLGETGYKERYYAEKFGVSNLDEIDKIKKDIVLKYVEG 350
           RA+G MPEEPRAS+VDKVKLG+ GY ERYYAEKFG S+  EI++IKKDIVLKYVEG
Sbjct: 424 RARGEMPEEPRASVVDKVKLGQPGYTERYYAEKFGASD-PEIERIKKDIVLKYVEG 478


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