BLASTX nr result

ID: Glycyrrhiza23_contig00026304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026304
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539004.1| PREDICTED: uncharacterized protein LOC100789...   162   3e-38
emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]    85   5e-15
ref|XP_002269865.1| PREDICTED: uncharacterized protein LOC100241...    84   1e-14
ref|XP_003615396.1| hypothetical protein MTR_5g067430 [Medicago ...    78   7e-13
ref|XP_004166522.1| PREDICTED: TATA box-binding protein-associat...    77   2e-12

>ref|XP_003539004.1| PREDICTED: uncharacterized protein LOC100789168 [Glycine max]
          Length = 719

 Score =  162 bits (409), Expect = 3e-38
 Identities = 80/111 (72%), Positives = 83/111 (74%)
 Frame = +1

Query: 82  MADIHNLTCQTCNNVGLGDGSDGFFYCLRCGSQYEXXXXXXXXXXXLFNKGETGGGAVYL 261
           M D+H L CQTCNNVG+GDGSDGFFYCLRCGSQ E           LFNK      AVYL
Sbjct: 1   MVDVHKLICQTCNNVGVGDGSDGFFYCLRCGSQCEDVMDTAVDDDDLFNKS-----AVYL 55

Query: 262 ASHQRQRPVAIKVEPISQYDSFYDSQSNFIRNLGLEDETPQRNEHDQVKNE 414
            SHQRQR VAIK EPISQYDSFYDS SNFIRNLGLEDE PQRN+H QVK E
Sbjct: 56  PSHQRQRSVAIKAEPISQYDSFYDSHSNFIRNLGLEDENPQRNDHVQVKRE 106


>emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]
          Length = 722

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
 Frame = +1

Query: 97  NLTCQTCNNVGLGDGSDGFFYCLRCGSQYEXXXXXXXXXXXLFNKGETGGGAVYLASHQR 276
           +LTC  C +VG  DG+DGFFYC RCGSQ E              KG+   GA+Y ASH+R
Sbjct: 6   BLTCHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAKGD-ARGAIYSASHRR 64

Query: 277 QR-PVAIKVEPISQYDSFYDSQSNFIRNLGLEDETPQRNEHDQVKNENI 420
           QR  +A K EP+SQ      SQS F+ NL L+D+   R E+++ + E +
Sbjct: 65  QRHSIAPKPEPLSQ------SQSQFLNNLTLDDD--YRVENEETREETV 105


>ref|XP_002269865.1| PREDICTED: uncharacterized protein LOC100241425 [Vitis vinifera]
          Length = 722

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
 Frame = +1

Query: 97  NLTCQTCNNVGLGDGSDGFFYCLRCGSQYEXXXXXXXXXXXLFNKGETGGGAVYLASHQR 276
           +LTC  C +VG  DG+DGFFYC RCGSQ E              KG+   GA+Y ASH+R
Sbjct: 6   DLTCHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAKGD-ARGAIYSASHRR 64

Query: 277 QR-PVAIKVEPISQYDSFYDSQSNFIRNLGLEDETPQRNEHDQVKNENI 420
           QR  +A K EP+SQ      SQS F+ NL L+D+   R E+++ + E +
Sbjct: 65  QRHSIAPKPEPLSQ------SQSQFLNNLTLDDD--YRVENEETREETV 105


>ref|XP_003615396.1| hypothetical protein MTR_5g067430 [Medicago truncatula]
           gi|355516731|gb|AES98354.1| hypothetical protein
           MTR_5g067430 [Medicago truncatula]
          Length = 734

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
 Frame = +1

Query: 52  VWLLLSCFPAMADIHNLTCQTCNNVG-LGDGSDGFFYCLRCGSQYEXXXXXXXXXXXLFN 228
           VWLLL  FPA+ DI  L CQ    VG + D  DGFFYC +C  +++           +F+
Sbjct: 72  VWLLLVYFPAIDDIRILKCQNYLFVGYVDDSDDGFFYCPKCNVRFD----------GVFD 121

Query: 229 KGETGGGAVYLASHQRQRPVAIKVEPISQYDSFYDSQSNFIRNLGLEDETPQRNEHDQVK 408
                   VY+   +R++  AIK EP SQ  S YD+ S F+ NL LEDET Q+N+   + 
Sbjct: 122 NDVDDVIDVYILRFRRKKSAAIKAEPNSQPCSEYDAWSKFVNNL-LEDET-QQNDDIHII 179

Query: 409 NENID 423
            +NID
Sbjct: 180 EQNID 184


>ref|XP_004166522.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like [Cucumis sativus]
          Length = 735

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
 Frame = +1

Query: 82  MADIHNLTCQTCNNVGLGDGSDGFFYCLRCGSQYEXXXXXXXXXXXLFNKGETGGGA-VY 258
           MAD  NL+C  C ++GL DG DGFFYCL+CGSQ +           L  +     GA +Y
Sbjct: 1   MADPSNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLVLRDVGKSGAPIY 60

Query: 259 LASHQRQR-PVAIKVEPISQYDS-FYDSQSNFIRNLGLEDE 375
             SH R+R P  +KVEP+SQ  S F  SQS F  +L L ++
Sbjct: 61  SQSHTRRRNPTVLKVEPLSQSQSLFGTSQSEFWDSLNLMED 101


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