BLASTX nr result

ID: Glycyrrhiza23_contig00026302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026302
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   123   2e-26
ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
gb|AAG12522.1|AC015446_3 Hypothetical Protein [Arabidopsis thali...   115   5e-24

>ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Vitis vinifera]
          Length = 573

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/85 (75%), Positives = 77/85 (90%)
 Frame = +2

Query: 2   AAQKRRNDVGRVREDMRNKDVKKVPGFSYTEIDGRIHKFINGDQSHPNSKEIYAKLDEIK 181
           AA++R  DVGRVRE M+++DV+KVPGFSY E++G IHKF+NGDQSHP+ +EIYAKLDEI+
Sbjct: 415 AARERWEDVGRVREAMKSRDVRKVPGFSYIEVEGVIHKFVNGDQSHPDWREIYAKLDEIR 474

Query: 182 FRIKGHGYVAETNLVLHDIGEEDKE 256
           FRIK  GYVAET+LVLHDIGEEDKE
Sbjct: 475 FRIKAFGYVAETSLVLHDIGEEDKE 499


>ref|XP_002306730.1| predicted protein [Populus trichocarpa] gi|222856179|gb|EEE93726.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score =  124 bits (311), Expect = 8e-27
 Identities = 60/85 (70%), Positives = 72/85 (84%)
 Frame = +2

Query: 2   AAQKRRNDVGRVREDMRNKDVKKVPGFSYTEIDGRIHKFINGDQSHPNSKEIYAKLDEIK 181
           AA++R  DVGRVRE M+N+DVKKVPG SY E +G IHKF N D+SH + +EIYAKLDEI+
Sbjct: 420 AARERWADVGRVREAMKNRDVKKVPGLSYIEGNGVIHKFYNADKSHESWREIYAKLDEIR 479

Query: 182 FRIKGHGYVAETNLVLHDIGEEDKE 256
           FR+K +GYVAET+ VLHDIGEEDKE
Sbjct: 480 FRVKEYGYVAETSFVLHDIGEEDKE 504


>ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/85 (67%), Positives = 72/85 (84%)
 Frame = +2

Query: 2   AAQKRRNDVGRVREDMRNKDVKKVPGFSYTEIDGRIHKFINGDQSHPNSKEIYAKLDEIK 181
           AA++R +DVGRVR+ MR +DVKK PGFSY EI G+++KF+NGDQSH + +EIYAKLDEI 
Sbjct: 418 AARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEIN 477

Query: 182 FRIKGHGYVAETNLVLHDIGEEDKE 256
            RIK +GY A+T+ VLHDIG+EDKE
Sbjct: 478 LRIKAYGYSADTSNVLHDIGDEDKE 502


>ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g34160-like [Cucumis sativus]
          Length = 576

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/85 (67%), Positives = 72/85 (84%)
 Frame = +2

Query: 2   AAQKRRNDVGRVREDMRNKDVKKVPGFSYTEIDGRIHKFINGDQSHPNSKEIYAKLDEIK 181
           AA++R +DVGRVR+ MR +DVKK PGFSY EI G+++KF+NGDQSH + +EIYAKLDEI 
Sbjct: 418 AARQRWDDVGRVRDAMRRRDVKKTPGFSYIEIKGKMYKFVNGDQSHSSCREIYAKLDEIN 477

Query: 182 FRIKGHGYVAETNLVLHDIGEEDKE 256
            RIK +GY A+T+ VLHDIG+EDKE
Sbjct: 478 LRIKAYGYSADTSNVLHDIGDEDKE 502


>gb|AAG12522.1|AC015446_3 Hypothetical Protein [Arabidopsis thaliana]
          Length = 539

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/85 (63%), Positives = 66/85 (77%)
 Frame = +2

Query: 2   AAQKRRNDVGRVREDMRNKDVKKVPGFSYTEIDGRIHKFINGDQSHPNSKEIYAKLDEIK 181
           AAQ R  DVGRVR+DM +K VKK+PG SY E  G IH+F N D+SH   +EIY K+DEI+
Sbjct: 420 AAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIR 479

Query: 182 FRIKGHGYVAETNLVLHDIGEEDKE 256
           F+I+  GYVA+T LVLHDIGEE+KE
Sbjct: 480 FKIREDGYVAQTGLVLHDIGEEEKE 504


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