BLASTX nr result
ID: Glycyrrhiza23_contig00026283
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00026283
(1637 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helica... 384 e-169
ref|XP_003623770.1| Ankyrin repeat and zinc finger domain-contai... 395 e-133
ref|XP_003623771.1| DEAD box family helicase [Medicago truncatul... 323 e-130
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245... 298 e-101
emb|CBI34887.3| unnamed protein product [Vitis vinifera] 311 e-100
>ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Glycine
max]
Length = 1195
Score = 384 bits (985), Expect(2) = e-169
Identities = 192/234 (82%), Positives = 208/234 (88%)
Frame = +3
Query: 3 YKGAVNSALLAKSLNQKLWDDSPYLLKQLPGIGMVTAKALHSMEIKSFEALAEADPRKIE 182
YKG VNSALLAKSL QKLWDDSPYLLKQLPGIGMVTAKALHSM ++SFE LA+ADPR+IE
Sbjct: 669 YKGTVNSALLAKSLGQKLWDDSPYLLKQLPGIGMVTAKALHSMGVRSFEELADADPRRIE 728
Query: 183 IVTGRKYPFGNHIKDSLLSLPPKVDVKLAEIESHTQGKSKLVVTLTRISQSGQSAKRHYA 362
+VTGRKYPFGNHIKDSLLSLPPKVDV LAEIESH QG SKLVVTL RISQSGQS KRHYA
Sbjct: 729 LVTGRKYPFGNHIKDSLLSLPPKVDVTLAEIESHIQGNSKLVVTLARISQSGQSVKRHYA 788
Query: 363 DMIIGSEEDNTILFHEKIRVDQFSSPYSPTILVSISQGKQTIKADFIFEEYIGIDVHQKL 542
DMI+GSEEDNTILFHEKIRVDQFSSPYS TI V I+QGKQTIK DFIFEEYIGIDVHQKL
Sbjct: 789 DMIVGSEEDNTILFHEKIRVDQFSSPYSATIFVPIAQGKQTIKVDFIFEEYIGIDVHQKL 848
Query: 543 SLMKASNPNVILKRNRKQASFPPPEEIIVIQDDNITVPHIPEKGPSNLSKDREA 704
S + SN V+LKRN+KQAS PPPEEI VI+DDNITVP +P K L++DR++
Sbjct: 849 SFTRESNSIVLLKRNKKQASCPPPEEIYVIEDDNITVPRLPTKELCKLNEDRDS 902
Score = 240 bits (613), Expect(2) = e-169
Identities = 148/318 (46%), Positives = 181/318 (56%), Gaps = 22/318 (6%)
Frame = +1
Query: 691 RTGRPSFDLLDENIEE--GEHTLDVEDDKSKIITAKTVFHHIREKAKNFHPLSAFDNIHC 864
R PSFDLLDE+ EE G V +D+ K IT KTVF HIREKAKNF LSA+DNIH
Sbjct: 900 RDSIPSFDLLDESFEEVEGVRAFGVVEDECKSITEKTVFDHIREKAKNFSLLSAYDNIHF 959
Query: 865 PSVEVLLARNHAHEKRTYHRHEXXXXXXXXRLNVPPQTDVNLP----------------- 993
PS+EVLL+RNHA EKR HRHE R VP + DVNL
Sbjct: 960 PSLEVLLSRNHAREKRPDHRHEVVVLDDEDRPEVPQRNDVNLQVELRKAEQDDIKFYLND 1019
Query: 994 ESSNFMSSIADTGVFVPEPEARSYEKTTEETVFDHIRRKSKDFPLVSKLDCVESIIHKTE 1173
+ S+I DTGVF+PEPEA ++EK+TEETVFDHIRRKSKDFP ++KL+C ESIIHKTE
Sbjct: 1020 HCTTGSSNIVDTGVFLPEPEAITHEKSTEETVFDHIRRKSKDFPPINKLNCAESIIHKTE 1079
Query: 1174 LFSKNHPSP---FNAALGLATETNSSDMETANVKNYSSSIPVDTEVKRKKSEDFCSIDGV 1344
LFSK +PSP + A G+A ETNS ++ + +Y + EV++
Sbjct: 1080 LFSKINPSPPSSLSDAFGVARETNSLEVTDNMLTSYMKTA---AEVEK------------ 1124
Query: 1345 LNISKGVSSTDSVQSYNFVPNFPMSKEKKRLPYPGGFEQSSKKQRCXXXXXXXXXXXXXX 1524
T S+Q +E+KR PG F +SSKKQRC
Sbjct: 1125 --------YTSSIQ-----------EERKRSSDPGSFPESSKKQRCASRDSKEEKHSSSE 1165
Query: 1525 XRRQCCSLETAGQMQQIE 1578
RRQCCSLE+ QM++IE
Sbjct: 1166 IRRQCCSLESTSQMKEIE 1183
>ref|XP_003623770.1| Ankyrin repeat and zinc finger domain-containing protein [Medicago
truncatula] gi|355498785|gb|AES79988.1| Ankyrin repeat
and zinc finger domain-containing protein [Medicago
truncatula]
Length = 803
Score = 395 bits (1015), Expect(2) = e-133
Identities = 199/233 (85%), Positives = 213/233 (91%)
Frame = +3
Query: 3 YKGAVNSALLAKSLNQKLWDDSPYLLKQLPGIGMVTAKALHSMEIKSFEALAEADPRKIE 182
+KGAVNSALLAKS NQKLWDDSPYLLKQLPGIGM+TAKALHSM +KSFEALAEADPRKIE
Sbjct: 119 FKGAVNSALLAKSFNQKLWDDSPYLLKQLPGIGMITAKALHSMGVKSFEALAEADPRKIE 178
Query: 183 IVTGRKYPFGNHIKDSLLSLPPKVDVKLAEIESHTQGKSKLVVTLTRISQSGQSAKRHYA 362
+VTGRKYPFGNHIKDSLLSLPPKVDVKL E+ESHT GKSKLVVTLTRISQSGQSAKRHYA
Sbjct: 179 LVTGRKYPFGNHIKDSLLSLPPKVDVKLTEMESHTHGKSKLVVTLTRISQSGQSAKRHYA 238
Query: 363 DMIIGSEEDNTILFHEKIRVDQFSSPYSPTILVSISQGKQTIKADFIFEEYIGIDVHQKL 542
DMIIG EEDNTI FHEKIRVDQFSSPYS TILV ISQGKQTIKA+FIFEEYIGIDVHQKL
Sbjct: 239 DMIIGLEEDNTIFFHEKIRVDQFSSPYSTTILVPISQGKQTIKANFIFEEYIGIDVHQKL 298
Query: 543 SLMKASNPNVILKRNRKQASFPPPEEIIVIQDDNITVPHIPEKGPSNLSKDRE 701
MK + +VILKRNRKQASFPPPEEI VI+DD+ + HIP++ S LSKD+E
Sbjct: 299 FFMKEISSDVILKRNRKQASFPPPEEIFVIEDDDRNLTHIPQEETSTLSKDKE 351
Score = 107 bits (267), Expect(2) = e-133
Identities = 59/103 (57%), Positives = 67/103 (65%), Gaps = 8/103 (7%)
Frame = +1
Query: 703 PSFDLLDENIEEGEHTLDVEDDKSKIITAKTVFHHIREKAKNFHPLSAFDNIHCPSVEVL 882
P+FDLL+E EE E +V++DK KIIT KTVF HIREKAKNF LS+F+NI CP VEVL
Sbjct: 357 PTFDLLNEMFEEDECATEVQEDKFKIITEKTVFDHIREKAKNFSLLSSFENIRCPPVEVL 416
Query: 883 LARNHA--------HEKRTYHRHEXXXXXXXXRLNVPPQTDVN 987
L RNHA HEK +YH HE VP QTDVN
Sbjct: 417 LGRNHACEKWSNHGHEKTSYHGHEVVVLDDDDN-KVPGQTDVN 458
>ref|XP_003623771.1| DEAD box family helicase [Medicago truncatula]
gi|355498786|gb|AES79989.1| DEAD box family helicase
[Medicago truncatula]
Length = 768
Score = 323 bits (828), Expect(2) = e-130
Identities = 182/335 (54%), Positives = 211/335 (62%), Gaps = 43/335 (12%)
Frame = +1
Query: 703 PSFDLLDENIEEGEHTLDVEDDKSKIITAKTVFHHIREKAKNFHPLSAFDNIHCPSVEVL 882
P+FDLL+E EE E +V++DK KIIT KTVF HIREKAKNF LS+F+NI CP VEVL
Sbjct: 404 PTFDLLNEMFEEDECATEVQEDKFKIITEKTVFDHIREKAKNFSLLSSFENIRCPPVEVL 463
Query: 883 LARNHA--------HEKRTYHRHEXXXXXXXXRLNVPPQTDVN----------------- 987
L RNHA HEK +YH HE VP QTDVN
Sbjct: 464 LGRNHACEKWSNHGHEKTSYHGHEVVVLDDDDN-KVPGQTDVNFQADLRKAEQEDINLSL 522
Query: 988 ------LPESSNFMSSIADTGVFVPEPEARSYEKTTEETVFDHIRRKSKDFPLVSKLDCV 1149
+ +S+ +SS+ DTG+F PEP+ARSYE TEETVFDHI+RKS+DFP +SKLDC+
Sbjct: 523 TLNDHNIAVNSDNISSVVDTGIFFPEPKARSYENATEETVFDHIKRKSEDFPQISKLDCL 582
Query: 1150 ESIIHKTELFSKNHPSPFNAALGLATETN----------SSDMETANVKNYSSSIPVDTE 1299
E+ I KTE FSKNHP+ AALG+ ETN +SDM+TA+V+NYSS V T
Sbjct: 583 ETAIKKTEFFSKNHPNSLKAALGMVAETNFSDMVTGSMLTSDMKTADVENYSSGFQVGTS 642
Query: 1300 VKRKKSEDFCSIDGVLNISKGVSSTDSVQSYNFVP--NFPMSKEKKRLPYPGGFEQSSKK 1473
V KKSED C DGV+NISKGVSST+SVQS NFVP FPMSKEK G FEQ SKK
Sbjct: 643 VNHKKSEDSCCTDGVVNISKGVSSTNSVQSSNFVPFIGFPMSKEKNWSSDSGSFEQRSKK 702
Query: 1474 QRCXXXXXXXXXXXXXXXRRQCCSLETAGQMQQIE 1578
QRC RRQCCSLET GQM Q+E
Sbjct: 703 QRCSPIESKEEKLNSCEIRRQCCSLETTGQMNQME 737
Score = 171 bits (432), Expect(2) = e-130
Identities = 86/111 (77%), Positives = 95/111 (85%)
Frame = +3
Query: 369 IIGSEEDNTILFHEKIRVDQFSSPYSPTILVSISQGKQTIKADFIFEEYIGIDVHQKLSL 548
IIG EEDNTI FHEKIRVDQFSSPYS TILV ISQGKQTIKA+FIFEEYIGIDVHQKL
Sbjct: 288 IIGLEEDNTIFFHEKIRVDQFSSPYSTTILVPISQGKQTIKANFIFEEYIGIDVHQKLFF 347
Query: 549 MKASNPNVILKRNRKQASFPPPEEIIVIQDDNITVPHIPEKGPSNLSKDRE 701
MK + +VILKRNRKQASFPPPEEI VI+DD+ + HIP++ S LSKD+E
Sbjct: 348 MKEISSDVILKRNRKQASFPPPEEIFVIEDDDRNLTHIPQEETSTLSKDKE 398
>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 298 bits (764), Expect(2) = e-101
Identities = 158/226 (69%), Positives = 181/226 (80%), Gaps = 2/226 (0%)
Frame = +3
Query: 3 YKGAVNSALLAKSLNQKLWDDSPYLLKQLPGIGMVTAKALHSMEIKSFEALAEADPRKIE 182
YKGA+NS LL+K L QKLWDDSPYLLKQLPGIGMVTAKALHSM I SFEALAEADPR+IE
Sbjct: 1420 YKGALNSILLSKCLLQKLWDDSPYLLKQLPGIGMVTAKALHSMGIVSFEALAEADPRRIE 1479
Query: 183 IVTGRKYPFGNHIKDSLLSLPPKVDVKLAEIESHTQGKSKLVVTLTRISQSGQSAKRHYA 362
IVTGRKYPFGNHIK+SL SLPPKV++K+ EIE QGKSK+V+ LTR+SQS QS KR+YA
Sbjct: 1480 IVTGRKYPFGNHIKESLSSLPPKVELKIEEIECQRQGKSKIVLILTRLSQSFQSIKRYYA 1539
Query: 363 DMIIGSEEDNTILFHEKIRVDQFSSPYSPTILVSI-SQGKQTIKADFIFEEYIGIDVHQK 539
DM++G EEDN ILFHEKI SPYS TIL+S QGK T+KAD IFEEYIGID+HQK
Sbjct: 1540 DMVVGLEEDNLILFHEKI------SPYSTTILLSTPQQGKLTVKADLIFEEYIGIDLHQK 1593
Query: 540 LSLMKASNPNVILKRNRKQ-ASFPPPEEIIVIQDDNITVPHIPEKG 674
L ++K N N+I R KQ +SFP P+E+ VI+DDN H KG
Sbjct: 1594 LLVVKEINSNMIHARGSKQLSSFPLPKEVYVIEDDNEDASHSSSKG 1639
Score = 99.8 bits (247), Expect(2) = e-101
Identities = 96/335 (28%), Positives = 152/335 (45%), Gaps = 43/335 (12%)
Frame = +1
Query: 703 PSFDLLDENIEEGEHTLDVEDDKSKIITAKTVFHHIREKAKNFHPLSAFDNIHCPSVEVL 882
P+F L+DE EEG ++ EDD+ KIIT +TVF HIR+K+K+F+ L+ + PS E L
Sbjct: 1654 PNFKLIDEESEEGSPAIETEDDECKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEAL 1713
Query: 883 -LARNHAHEKR-----TYHRHEXXXXXXXXRLNVPP-----QTDVNLPESS--------- 1002
L R HE++ T E R V P + ++N P S
Sbjct: 1714 ILTRKRTHEQQLELHVTEALEETERSKIPRRAMVSPFLHSREAELNGPGISKNSTTKYQP 1773
Query: 1003 --------NFMSSIADTGVFVPEPEARSYEKTTEETVFDHIRRKSKDFPLVSKLDCVE-- 1152
NFM AD +PE + + TE T+FDHIRRK+K+F + +K + E
Sbjct: 1774 ATGSLVVMNFMDDRAD----LPERTESTSQIVTENTIFDHIRRKAKNFLVFNKSETPESD 1829
Query: 1153 SIIHKTELFSKNHPSPFNAALGLATETNSSD-METANVKNYSSSIPVDTEVKRKK----- 1314
S I E FS+N P + TNSS+ ++T V + S ++ E +
Sbjct: 1830 STILTKEHFSENQPVLHEDSFDTLEGTNSSEALKTTVVISDSEPKKMEKESHHVREGAKM 1889
Query: 1315 -----SEDFCSIDGVLNISKGVSSTDSVQSYNFVPNFPMSKEKKRLPY--PGGFEQSSKK 1473
S CS G L+ VSS + ++ +P+F +++ K + PG ++ +K
Sbjct: 1890 DPNIISGSTCSTHGSLDPLPEVSSIQTDPTH--IPSFYVARVKNNVQNADPGMCVKNIRK 1947
Query: 1474 QRCXXXXXXXXXXXXXXXRRQCCSLETAGQMQQIE 1578
+ + QCC T G++++++
Sbjct: 1948 R----------SLSPNGSKGQCCPAATPGKIREVD 1972
>emb|CBI34887.3| unnamed protein product [Vitis vinifera]
Length = 1270
Score = 311 bits (796), Expect(2) = e-100
Identities = 163/227 (71%), Positives = 187/227 (82%), Gaps = 3/227 (1%)
Frame = +3
Query: 3 YKGAVNSALLAKSLNQKLWDDSPYLLKQLPGIGMVTAKALHSMEIKSFEALAEADPRKIE 182
YKGA+NS LL+K L QKLWDDSPYLLKQLPGIGMVTAKALHSM I SFEALAEADPR+IE
Sbjct: 667 YKGALNSILLSKCLLQKLWDDSPYLLKQLPGIGMVTAKALHSMGIVSFEALAEADPRRIE 726
Query: 183 IVTGRKYPFGNHIKDSLLSLPPKVDVKLAEIESHTQGKSKLVVTLTRISQSGQSAKRHYA 362
IVTGRKYPFGNHIK+SL SLPPKV++K+ EIE QGKSK+V+ LTR+SQS QS KR+YA
Sbjct: 727 IVTGRKYPFGNHIKESLSSLPPKVELKIEEIECQRQGKSKIVLILTRLSQSFQSIKRYYA 786
Query: 363 DMIIGSEEDNTILFHEKI-RVDQFSSPYSPTILVSI-SQGKQTIKADFIFEEYIGIDVHQ 536
DM++G EEDN ILFHEKI RVD+FSSPYS TIL+S QGK T+KAD IFEEYIGID+HQ
Sbjct: 787 DMVVGLEEDNLILFHEKISRVDEFSSPYSTTILLSTPQQGKLTVKADLIFEEYIGIDLHQ 846
Query: 537 KLSLMKASNPNVILKRNRKQ-ASFPPPEEIIVIQDDNITVPHIPEKG 674
KL ++K N N+I R KQ +SFP P+E+ VI+DDN H KG
Sbjct: 847 KLLVVKEINSNMIHARGSKQLSSFPLPKEVYVIEDDNEDASHSSSKG 893
Score = 84.3 bits (207), Expect(2) = e-100
Identities = 95/363 (26%), Positives = 153/363 (42%), Gaps = 71/363 (19%)
Frame = +1
Query: 703 PSFDLLDENIEE-GEHTLDVEDDKSKIITAKTVFHHIREKAKNFHPLSAFDNIHCPSVEV 879
P+F L+DE EE G ++ EDD+ KIIT +TVF HIR+K+K+F+ L+ + PS E
Sbjct: 908 PNFKLIDEESEEEGSPAIETEDDECKIITEQTVFEHIRKKSKSFNVLTKSNASVSPSSEA 967
Query: 880 L-LARNHAHEKR-----TYHRHEXXXXXXXXRLNVPP-----QTDVNLPESSN------- 1005
L L R HE++ T E R V P + ++N P S
Sbjct: 968 LILTRKRTHEQQLELHVTEALEETERSKIPRRAMVSPFLHSREAELNGPGISKNSTTKYQ 1027
Query: 1006 -------FMSSIADTGVF------------------------------VPEPEARSYEKT 1074
M+ + D G F +PE + +
Sbjct: 1028 PATGSLVVMNFMDDRGAFLFYFIKCYYYYHYSVLYGVLNHLFVSIQADLPERTESTSQIV 1087
Query: 1075 TEETVFDHIRRKSKDFPLVSKLDCVE--SIIHKTELFSKNHPSPFNAALGLATETNSSD- 1245
TE T+FDHIRRK+K+F + +K + E S I E FS+N P + TNSS+
Sbjct: 1088 TENTIFDHIRRKAKNFLVFNKSETPESDSTILTKEHFSENQPVLHEDSFDTLEGTNSSEA 1147
Query: 1246 METANVKNYSSSIPVDTEVKRKK----------SEDFCSIDGVLNISKGVSSTDSVQSYN 1395
++T V + S ++ E + S CS G L+ VSS + ++
Sbjct: 1148 LKTTVVISDSEPKKMEKESHHVREGAKMDPNIISGSTCSTHGSLDPLPEVSSIQTDPTH- 1206
Query: 1396 FVPNFPMSKEKKRLPY--PGGFEQSSKKQRCXXXXXXXXXXXXXXXRRQCCSLETAGQMQ 1569
+P+F +++ K + PG ++ +K+ + QCC T G+++
Sbjct: 1207 -IPSFYVARVKNNVQNADPGMCVKNIRKR----------SLSPNGSKGQCCPAATPGKIR 1255
Query: 1570 QIE 1578
+++
Sbjct: 1256 EVD 1258