BLASTX nr result

ID: Glycyrrhiza23_contig00026213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026213
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containi...   239   6e-61
ref|XP_003519761.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   229   7e-58
ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250...   202   5e-50
ref|XP_002523091.1| magnesium/proton exchanger, putative [Ricinu...   198   1e-48
ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp....   193   4e-47

>ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Glycine max]
          Length = 1116

 Score =  239 bits (609), Expect = 6e-61
 Identities = 118/158 (74%), Positives = 130/158 (82%), Gaps = 8/158 (5%)
 Frame = +2

Query: 332 NVESFVWNNLIRGRPKST--------AFSIYLRMRLHAVTPDLHTFPFLLQSFNSPPHLP 487
           N+ESFVWNNLIR   +S         A S+YLRMRLHAV PDLHTFPFLLQS N+P    
Sbjct: 21  NIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQSINTPH--- 77

Query: 488 RGRQLHAQILLLGLSSDPFVQTSLIHMYSSCGSVPFAHQVFDEIPHPDLPSWNAIIHANA 667
           RGRQLHAQILLLGL++DPFVQTSLI+MYSSCG+  FA Q FDEI  PDLPSWNAIIHANA
Sbjct: 78  RGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANA 137

Query: 668 NLGLIHNARKLFDRMPQRNVISWSCMIHGYVSCGEYKA 781
             G+IH ARKLFD+MP++NVISWSCMIHGYVSCGEYKA
Sbjct: 138 KAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKA 175


>ref|XP_003519761.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g62890-like [Glycine max]
          Length = 567

 Score =  229 bits (583), Expect = 7e-58
 Identities = 114/156 (73%), Positives = 126/156 (80%), Gaps = 6/156 (3%)
 Frame = +2

Query: 332 NVESFVWNNLIRGRPKST------AFSIYLRMRLHAVTPDLHTFPFLLQSFNSPPHLPRG 493
           N+ESFVWNNLIR   ++       A S+YLRMR HAV PDLHTFPFLLQS N+P     G
Sbjct: 21  NIESFVWNNLIRANTRNRVKSFPPALSLYLRMRHHAVLPDLHTFPFLLQSINTPHP---G 77

Query: 494 RQLHAQILLLGLSSDPFVQTSLIHMYSSCGSVPFAHQVFDEIPHPDLPSWNAIIHANANL 673
           RQLHAQI LLGL++DPFVQTSLI+MYSS G++ FA QVFDEI  PDLPSWNAIIHANA  
Sbjct: 78  RQLHAQIFLLGLANDPFVQTSLINMYSSRGTLTFARQVFDEITQPDLPSWNAIIHANAKA 137

Query: 674 GLIHNARKLFDRMPQRNVISWSCMIHGYVSCGEYKA 781
           G+IH ARKLFD+MP RNVISWSCMIHGY SCGEYKA
Sbjct: 138 GMIHIARKLFDQMPHRNVISWSCMIHGYASCGEYKA 173


>ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
          Length = 1130

 Score =  202 bits (515), Expect = 5e-50
 Identities = 100/157 (63%), Positives = 115/157 (73%), Gaps = 9/157 (5%)
 Frame = +2

Query: 335 VESFVWNNLIRGR---------PKSTAFSIYLRMRLHAVTPDLHTFPFLLQSFNSPPHLP 487
           +ESF+WN LIR           P  +  SI++RMR H V PD HTFPFLLQSF SP  L 
Sbjct: 22  LESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLH 81

Query: 488 RGRQLHAQILLLGLSSDPFVQTSLIHMYSSCGSVPFAHQVFDEIPHPDLPSWNAIIHANA 667
            GR +HAQIL  GL+ DPFVQTSLI MYSSCG++ FA QVFDEIP PDLPSWN+II+AN 
Sbjct: 82  LGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANF 141

Query: 668 NLGLIHNARKLFDRMPQRNVISWSCMIHGYVSCGEYK 778
             GL+  AR LF  MP+RNVISWSCMI+GYV CG+YK
Sbjct: 142 QAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYK 178


>ref|XP_002523091.1| magnesium/proton exchanger, putative [Ricinus communis]
           gi|223537653|gb|EEF39276.1| magnesium/proton exchanger,
           putative [Ricinus communis]
          Length = 1015

 Score =  198 bits (503), Expect = 1e-48
 Identities = 101/182 (55%), Positives = 123/182 (67%), Gaps = 5/182 (2%)
 Frame = +2

Query: 248 SEQ*APMRGLTKAIXXXXXXXXXXXXXXNVESFVWNNLIRGRPKSTA-----FSIYLRMR 412
           S Q A MR  TK I               +ESF WN ++R   +++       S+YLRMR
Sbjct: 16  SRQSAIMRASTKLISSAHPTLNFAHQ--TLESFTWNTILRFHVQASVRTHPPISVYLRMR 73

Query: 413 LHAVTPDLHTFPFLLQSFNSPPHLPRGRQLHAQILLLGLSSDPFVQTSLIHMYSSCGSVP 592
            H V PD HTFPFLLQSF+S PHL  G+Q+H QI   GL  D FVQTSLI+MYSSCG+  
Sbjct: 74  YHGVKPDFHTFPFLLQSFHSQPHLVSGKQIHTQIHHFGLVHDSFVQTSLINMYSSCGNFS 133

Query: 593 FAHQVFDEIPHPDLPSWNAIIHANANLGLIHNARKLFDRMPQRNVISWSCMIHGYVSCGE 772
           FA Q+FDEI  PDLPSWN+II+A+  +GL+  AR LFD MP+RNVI+WSCMI+G+V CGE
Sbjct: 134 FARQIFDEIAQPDLPSWNSIINASVKVGLVDVARGLFDVMPERNVITWSCMINGFVKCGE 193

Query: 773 YK 778
           YK
Sbjct: 194 YK 195


>ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322531|gb|EFH52952.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  193 bits (490), Expect = 4e-47
 Identities = 90/155 (58%), Positives = 117/155 (75%), Gaps = 7/155 (4%)
 Frame = +2

Query: 335 VESFVWNNLIRG-------RPKSTAFSIYLRMRLHAVTPDLHTFPFLLQSFNSPPHLPRG 493
           +ESFVWN +IR          + +  S+Y RMR H V+PD HTFPFLL SF++P HLP G
Sbjct: 21  LESFVWNIIIRAIVHNVSPPQRHSPISVYFRMRHHCVSPDFHTFPFLLPSFHNPIHLPLG 80

Query: 494 RQLHAQILLLGLSSDPFVQTSLIHMYSSCGSVPFAHQVFDEIPHPDLPSWNAIIHANANL 673
           ++ HAQILL GL  DPFV+TSL++MYSSCG +  A ++FDE    DLP+WN++++A A  
Sbjct: 81  QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLSSALRIFDESVSKDLPAWNSVVNAYAKA 140

Query: 674 GLIHNARKLFDRMPQRNVISWSCMIHGYVSCGEYK 778
           GLI++ARKLFD MP+RNVISWSC+I+GYV CG+YK
Sbjct: 141 GLINHARKLFDEMPERNVISWSCLINGYVMCGKYK 175


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