BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026212
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago t...   277   1e-72
ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containi...   266   2e-69
ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containi...   228   1e-57
gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]             213   2e-53
ref|NP_564054.1| pentatricopeptide repeat-containing protein [Ar...   213   2e-53

>ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355484722|gb|AES65925.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 975

 Score =  277 bits (708), Expect = 1e-72
 Identities = 141/216 (65%), Positives = 163/216 (75%)
 Frame = -2

Query: 648 ILLFVELLSATEHAPDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVA 469
           + +FVE++S TE  PD+FTLPCVIK+C G+ D  LG AVH  ALKT + SD FVGNAL+A
Sbjct: 180 VFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIA 239

Query: 468 MYGKFGFVESAFKVFGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLV 289
           MYGKFGFVESA KVF KMP+RNLVSWNS+MYAC ENGVFEE Y LFKG+         L+
Sbjct: 240 MYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGL---LNGDEGLM 296

Query: 288 PDVATMVTVIPVCASQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVL 109
           PDVATMVTVIP+CA QGE++                   VN+SL+DMYSKCGYL +ARVL
Sbjct: 297 PDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVL 356

Query: 108 FDRNEVKNVVSWNSMIGGYSKEGDSRGAFELLRRMQ 1
           FD NE KNV+SWNSMIGGYSK+ D RGAFELLR+MQ
Sbjct: 357 FDTNE-KNVISWNSMIGGYSKDRDFRGAFELLRKMQ 391



 Score =  106 bits (264), Expect = 4e-21
 Identities = 61/202 (30%), Positives = 97/202 (48%)
 Frame = -2

Query: 606  PDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYGKFGFVESAFKV 427
            PD FT+  ++ +CA L     G+ +H   L+ G   D F+  +LV++Y + G +  A   
Sbjct: 500  PDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLF 559

Query: 426  FGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCA 247
            F  M E+NLV WN+M+   S+N    +  D+F  +           PD  +++  +  C+
Sbjct: 560  FDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIW-----PDEISIIGALGACS 614

Query: 246  SQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDRNEVKNVVSWNS 67
                L+                   V  SL+DMY+KCG +  ++ +FDR  +K  V+WN 
Sbjct: 615  QVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNV 674

Query: 66   MIGGYSKEGDSRGAFELLRRMQ 1
            +I GY   G  R A EL + MQ
Sbjct: 675  LITGYGIHGHGRKAIELFKSMQ 696



 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 71/216 (32%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
 Frame = -2

Query: 642 LFVELLSATEHA-PDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAM 466
           LF  LL+  E   PD  T+  VI  CA   +  LG   H LALK GL  +  V ++L+ M
Sbjct: 284 LFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDM 343

Query: 465 YGKFGFVESAFKVFGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVP 286
           Y K G++  A +V     E+N++SWNSM+   S++  F   ++L + +          V 
Sbjct: 344 YSKCGYLCEA-RVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEV- 401

Query: 285 DVATMVTVIPVCASQGE-LKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVL 109
              T++ V+PVC  + + LK                  +V N+ +  Y+KCG LH A  +
Sbjct: 402 ---TLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGV 458

Query: 108 FDRNEVKNVVSWNSMIGGYSKEGDSRGAFELLRRMQ 1
           F   E K V SWN++IGG+ + G  R A +L   M+
Sbjct: 459 FCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMR 494



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 4/209 (1%)
 Frame = -2

Query: 633 ELLSATEHAPDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLF-SDAFVGNALVAMYGK 457
           +++S++   P    +  +++ C    + E+GR +H     +  F +D  +   LV MY  
Sbjct: 83  DVVSSSNSKPKQL-IGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSI 141

Query: 456 FGFVESAFKVFGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVA 277
                 +  VF     +NL  WN+++     N +F +   +F             VPD  
Sbjct: 142 CDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVF----VEMISLTEFVPDNF 197

Query: 276 TMVTVIPVCASQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDRN 97
           T+  VI  C    +++                   V N+L+ MY K G++  A  +FD+ 
Sbjct: 198 TLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKM 257

Query: 96  EVKNVVSWNSMIGGYSKEG---DSRGAFE 19
             +N+VSWNS++    + G   +S G F+
Sbjct: 258 PQRNLVSWNSVMYACLENGVFEESYGLFK 286


>ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  266 bits (680), Expect = 2e-69
 Identities = 141/216 (65%), Positives = 158/216 (73%)
 Frame = -2

Query: 648 ILLFVELLSATEHAPDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVA 469
           I LF+ELLSAT+ APD+FTLPCV K+CAG+ D ELG AVHALALK G FSDAFVGNAL+A
Sbjct: 179 ISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIA 238

Query: 468 MYGKFGFVESAFKVFGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLV 289
           MYGK GFVESA KVF  M  RNLVSWNS+MYACSENG F EC  +FK +         LV
Sbjct: 239 MYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRL--LISEEEGLV 296

Query: 288 PDVATMVTVIPVCASQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVL 109
           PDVATMVTVIP CA+ GE++                   VNNSL+DMYSKCGYL +AR L
Sbjct: 297 PDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARAL 356

Query: 108 FDRNEVKNVVSWNSMIGGYSKEGDSRGAFELLRRMQ 1
           FD N  KNVVSWN++I GYSKEGD RG FELL+ MQ
Sbjct: 357 FDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQ 392



 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 57/202 (28%), Positives = 92/202 (45%)
 Frame = -2

Query: 606  PDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYGKFGFVESAFKV 427
            PD FT+  ++ +CA L     G+ +H   L+ GL  D F+G +L+++Y +   +     +
Sbjct: 500  PDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLI 559

Query: 426  FGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCA 247
            F KM  ++LV WN M+   S+N +  E  D F+ +           P    +  V+  C+
Sbjct: 560  FDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIK-----PQEIAVTGVLGACS 614

Query: 246  SQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDRNEVKNVVSWNS 67
                L+                   V  +L+DMY+KCG +  ++ +FDR   K+   WN 
Sbjct: 615  QVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNV 674

Query: 66   MIGGYSKEGDSRGAFELLRRMQ 1
            +I GY   G    A EL   MQ
Sbjct: 675  IIAGYGIHGHGLKAIELFELMQ 696



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 52/193 (26%), Positives = 89/193 (46%)
 Frame = -2

Query: 582 VIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYGKFGFVESAFKVFGKMPERN 403
           V+ +C+G       + +H  A + G   D  V NA VA Y K   ++ A +VF  M  + 
Sbjct: 407 VLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKT 466

Query: 402 LVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCASQGELKXX 223
           + SWN+++ A ++NG   +  DLF  +           PD  T+ +++  CA    L+  
Sbjct: 467 VSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMD-----PDRFTIGSLLLACARLKFLRCG 521

Query: 222 XXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDRNEVKNVVSWNSMIGGYSKE 43
                            +  SLM +Y +C  +   +++FD+ E K++V WN MI G+S+ 
Sbjct: 522 KEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQN 581

Query: 42  GDSRGAFELLRRM 4
                A +  R+M
Sbjct: 582 ELPCEALDTFRQM 594



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/123 (28%), Positives = 60/123 (48%)
 Frame = -2

Query: 606 PDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYGKFGFVESAFKV 427
           P    +  V+ +C+ ++   LG+ VH+ ALK  L  DAFV  AL+ MY K G +E +  +
Sbjct: 601 PQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNI 660

Query: 426 FGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCA 247
           F ++ E++   WN ++     +G   +  +LF+ +           PD  T + V+  C 
Sbjct: 661 FDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGR-----PDSFTFLGVLIACN 715

Query: 246 SQG 238
             G
Sbjct: 716 HAG 718


>ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  228 bits (580), Expect = 1e-57
 Identities = 115/214 (53%), Positives = 148/214 (69%)
 Frame = -2

Query: 642 LFVELLSATEHAPDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMY 463
           +F EL+S TEH PD+FTLPCVIK+CAGL D  LG+ +H +A K  L SD FVGNAL+AMY
Sbjct: 87  IFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMY 146

Query: 462 GKFGFVESAFKVFGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPD 283
           GK G VE A KVF  MPERNLVSWNS++   SENG  +E ++ F+ +          VPD
Sbjct: 147 GKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREM---LVGEESFVPD 203

Query: 282 VATMVTVIPVCASQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFD 103
           VAT+VTV+PVCA + +++                  MVNNSL+DMYSKC +L +A++LFD
Sbjct: 204 VATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFD 263

Query: 102 RNEVKNVVSWNSMIGGYSKEGDSRGAFELLRRMQ 1
           +N+ KN+VSWNSMIGGY++E D    F LL++MQ
Sbjct: 264 KNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQ 297



 Score =  100 bits (248), Expect = 3e-19
 Identities = 60/201 (29%), Positives = 100/201 (49%)
 Frame = -2

Query: 606 PDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYGKFGFVESAFKV 427
           PD FT+  ++ +C+ +     G  +H  AL+ GL  D F+G +L+++Y   G   +A  +
Sbjct: 406 PDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVL 465

Query: 426 FGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCA 247
           F  M  R+LVSWN M+   S+NG+ +E  +LF+ +           P    ++ V   C+
Sbjct: 466 FDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQ-----PYEIAIMCVCGACS 520

Query: 246 SQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDRNEVKNVVSWNS 67
               L+                   V++S++DMY+K G +  ++ +FDR   K+V SWN 
Sbjct: 521 QLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNV 580

Query: 66  MIGGYSKEGDSRGAFELLRRM 4
           +I GY   G  + A EL  +M
Sbjct: 581 IIAGYGIHGRGKEALELFEKM 601



 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 1/194 (0%)
 Frame = -2

Query: 582 VIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNA-LVAMYGKFGFVESAFKVFGKMPER 406
           ++++C    D E+GR +H +   +  F + FV N  ++ MY   G    +  VF K+  +
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 405 NLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCASQGELKX 226
           NL  WN+++ A + N +FE+   +F  +           PD  T+  VI  CA   +L  
Sbjct: 64  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHK----PDNFTLPCVIKACAGLLDLGL 119

Query: 225 XXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDRNEVKNVVSWNSMIGGYSK 46
                             V N+L+ MY KCG + +A  +F+    +N+VSWNS+I G+S+
Sbjct: 120 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE 179

Query: 45  EGDSRGAFELLRRM 4
            G  + +F   R M
Sbjct: 180 NGFLQESFNAFREM 193



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 55/200 (27%), Positives = 94/200 (47%)
 Frame = -2

Query: 603 DSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYGKFGFVESAFKVF 424
           D FT+  V+  C   ++ +  + +H  + + GL S+  V NA +A Y + G + S+ +VF
Sbjct: 306 DEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVF 365

Query: 423 GKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCAS 244
             M  + + SWN+++   ++N    +  DL+  +           PD  T+ +++  C+ 
Sbjct: 366 DLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLD-----PDWFTIGSLLLACSR 420

Query: 243 QGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDRNEVKNVVSWNSM 64
              L                    +  SL+ +Y  CG    A+VLFD  E +++VSWN M
Sbjct: 421 MKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVM 480

Query: 63  IGGYSKEGDSRGAFELLRRM 4
           I GYS+ G    A  L R+M
Sbjct: 481 IAGYSQNGLPDEAINLFRQM 500


>gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  213 bits (542), Expect = 2e-53
 Identities = 106/212 (50%), Positives = 141/212 (66%)
 Frame = -2

Query: 639  FVELLSATEHAPDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYG 460
            F+E++S T+  PD FT PCVIK+CAG++D  +G AVH L +KTGL  D FVGNALV+ YG
Sbjct: 529  FIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG 588

Query: 459  KFGFVESAFKVFGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDV 280
              GFV  A ++F  MPERNLVSWNSM+   S+NG  EE + L  G           +PDV
Sbjct: 589  THGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF-LLLGEMMEENGDGAFMPDV 647

Query: 279  ATMVTVIPVCASQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDR 100
            AT+VTV+PVCA + E+                   ++NN+LMDMYSKCG + +A+++F  
Sbjct: 648  ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM 707

Query: 99   NEVKNVVSWNSMIGGYSKEGDSRGAFELLRRM 4
            N  KNVVSWN+M+GG+S EGD+ G F++LR+M
Sbjct: 708  NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 739



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 57/192 (29%), Positives = 90/192 (46%)
 Frame = -2

Query: 606  PDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYGKFGFVESAFKV 427
            PD  TL  V+  CA   +  LG+ VH  A+K  L  +  + NAL+ MY K G + +A  +
Sbjct: 645  PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 704

Query: 426  FGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCA 247
            F     +N+VSWN+M+   S  G     +D+ + +            D  T++  +PVC 
Sbjct: 705  FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA---DEVTILNAVPVCF 761

Query: 246  SQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDRNEVKNVVSWNS 67
             +  L                   +V N+ +  Y+KCG L  A+ +F     K V SWN+
Sbjct: 762  HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 821

Query: 66   MIGGYSKEGDSR 31
            +IGG+++  D R
Sbjct: 822  LIGGHAQSNDPR 833



 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 52/202 (25%), Positives = 96/202 (47%)
 Frame = -2

Query: 606  PDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYGKFGFVESAFKV 427
            PDSFT+  ++ +C+ L    LG+ VH   ++  L  D FV  +++++Y   G + +   +
Sbjct: 849  PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 908

Query: 426  FGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCA 247
            F  M +++LVSWN+++    +NG  +    +F+ +               +M+ V   C+
Sbjct: 909  FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG-----ISMMPVFGACS 963

Query: 246  SQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDRNEVKNVVSWNS 67
                L+                   +  SL+DMY+K G +  +  +F+  + K+  SWN+
Sbjct: 964  LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 1023

Query: 66   MIGGYSKEGDSRGAFELLRRMQ 1
            MI GY   G ++ A +L   MQ
Sbjct: 1024 MIMGYGIHGLAKEAIKLFEEMQ 1045



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 6/216 (2%)
 Frame = -2

Query: 633  ELLSATEHAPDSF-----TLPCVIKSCAGLTDSELGRAVHALAL-KTGLFSDAFVGNALV 472
            E +   E + D+F      L  ++++     D E+GR +H L    T L +D  +   ++
Sbjct: 423  EFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRII 482

Query: 471  AMYGKFGFVESAFKVFGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXL 292
             MY   G  + +  VF  +  +NL  WN+++ + S N +++E  + F            L
Sbjct: 483  TMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETF----IEMISTTDL 538

Query: 291  VPDVATMVTVIPVCASQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARV 112
            +PD  T   VI  CA   ++                    V N+L+  Y   G++ DA  
Sbjct: 539  LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 598

Query: 111  LFDRNEVKNVVSWNSMIGGYSKEGDSRGAFELLRRM 4
            LFD    +N+VSWNSMI  +S  G S  +F LL  M
Sbjct: 599  LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEM 634



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/115 (33%), Positives = 57/115 (49%)
 Frame = -2

Query: 582  VIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYGKFGFVESAFKVFGKMPERN 403
            V  +C+ L    LGR  HA ALK  L  DAF+  +L+ MY K G +  + KVF  + E++
Sbjct: 958  VFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKS 1017

Query: 402  LVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCASQG 238
              SWN+M+     +G+ +E   LF+ +           PD  T + V+  C   G
Sbjct: 1018 TASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN-----PDDLTFLGVLTACNHSG 1067


>ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g18485 gi|332191599|gb|AEE29720.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  213 bits (542), Expect = 2e-53
 Identities = 106/212 (50%), Positives = 141/212 (66%)
 Frame = -2

Query: 639 FVELLSATEHAPDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYG 460
           F+E++S T+  PD FT PCVIK+CAG++D  +G AVH L +KTGL  D FVGNALV+ YG
Sbjct: 174 FIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG 233

Query: 459 KFGFVESAFKVFGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDV 280
             GFV  A ++F  MPERNLVSWNSM+   S+NG  EE + L  G           +PDV
Sbjct: 234 THGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF-LLLGEMMEENGDGAFMPDV 292

Query: 279 ATMVTVIPVCASQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDR 100
           AT+VTV+PVCA + E+                   ++NN+LMDMYSKCG + +A+++F  
Sbjct: 293 ATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKM 352

Query: 99  NEVKNVVSWNSMIGGYSKEGDSRGAFELLRRM 4
           N  KNVVSWN+M+GG+S EGD+ G F++LR+M
Sbjct: 353 NNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384



 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 57/192 (29%), Positives = 90/192 (46%)
 Frame = -2

Query: 606 PDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYGKFGFVESAFKV 427
           PD  TL  V+  CA   +  LG+ VH  A+K  L  +  + NAL+ MY K G + +A  +
Sbjct: 290 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 349

Query: 426 FGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCA 247
           F     +N+VSWN+M+   S  G     +D+ + +            D  T++  +PVC 
Sbjct: 350 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA---DEVTILNAVPVCF 406

Query: 246 SQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDRNEVKNVVSWNS 67
            +  L                   +V N+ +  Y+KCG L  A+ +F     K V SWN+
Sbjct: 407 HESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNA 466

Query: 66  MIGGYSKEGDSR 31
           +IGG+++  D R
Sbjct: 467 LIGGHAQSNDPR 478



 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 52/202 (25%), Positives = 96/202 (47%)
 Frame = -2

Query: 606  PDSFTLPCVIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYGKFGFVESAFKV 427
            PDSFT+  ++ +C+ L    LG+ VH   ++  L  D FV  +++++Y   G + +   +
Sbjct: 494  PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553

Query: 426  FGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCA 247
            F  M +++LVSWN+++    +NG  +    +F+ +               +M+ V   C+
Sbjct: 554  FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG-----ISMMPVFGACS 608

Query: 246  SQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARVLFDRNEVKNVVSWNS 67
                L+                   +  SL+DMY+K G +  +  +F+  + K+  SWN+
Sbjct: 609  LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 668

Query: 66   MIGGYSKEGDSRGAFELLRRMQ 1
            MI GY   G ++ A +L   MQ
Sbjct: 669  MIMGYGIHGLAKEAIKLFEEMQ 690



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 6/216 (2%)
 Frame = -2

Query: 633 ELLSATEHAPDSF-----TLPCVIKSCAGLTDSELGRAVHALAL-KTGLFSDAFVGNALV 472
           E +   E + D+F      L  ++++     D E+GR +H L    T L +D  +   ++
Sbjct: 68  EFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRII 127

Query: 471 AMYGKFGFVESAFKVFGKMPERNLVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXL 292
            MY   G  + +  VF  +  +NL  WN+++ + S N +++E  + F            L
Sbjct: 128 TMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETF----IEMISTTDL 183

Query: 291 VPDVATMVTVIPVCASQGELKXXXXXXXXXXXXXXXXXXMVNNSLMDMYSKCGYLHDARV 112
           +PD  T   VI  CA   ++                    V N+L+  Y   G++ DA  
Sbjct: 184 LPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQ 243

Query: 111 LFDRNEVKNVVSWNSMIGGYSKEGDSRGAFELLRRM 4
           LFD    +N+VSWNSMI  +S  G S  +F LL  M
Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEM 279



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 38/115 (33%), Positives = 57/115 (49%)
 Frame = -2

Query: 582 VIKSCAGLTDSELGRAVHALALKTGLFSDAFVGNALVAMYGKFGFVESAFKVFGKMPERN 403
           V  +C+ L    LGR  HA ALK  L  DAF+  +L+ MY K G +  + KVF  + E++
Sbjct: 603 VFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKS 662

Query: 402 LVSWNSMMYACSENGVFEECYDLFKGIXXXXXXXXXLVPDVATMVTVIPVCASQG 238
             SWN+M+     +G+ +E   LF+ +           PD  T + V+  C   G
Sbjct: 663 TASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN-----PDDLTFLGVLTACNHSG 712