BLASTX nr result

ID: Glycyrrhiza23_contig00026188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026188
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67526.1| hypothetical protein VITISV_011686 [Vitis vinifera]   135   4e-30
gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza...   132   2e-29
emb|CAN63433.1| hypothetical protein VITISV_033829 [Vitis vinifera]   132   2e-29
emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]   132   3e-29
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   131   6e-29

>emb|CAN67526.1| hypothetical protein VITISV_011686 [Vitis vinifera]
          Length = 124

 Score =  135 bits (339), Expect = 4e-30
 Identities = 63/100 (63%), Positives = 80/100 (80%)
 Frame = -3

Query: 300 LKSIDKNQTWELVDLPFNKKPISVRWVYKLKLKPDGTIAKHKARLVARGFLQRPSLDYSE 121
           LK I+KNQTWELVD P +K+ I V+WVY+ KL  DG+I KHKARLV +G+ Q   +D+SE
Sbjct: 8   LKMIEKNQTWELVDKPTHKRTIGVKWVYRTKLNSDGSIKKHKARLVVKGYAQMFGVDFSE 67

Query: 120 VFAPVARTETIRLVLALAISRGWSLFQLDVKSTFLNGPLE 1
            FAPVAR +TIR++LALA  +GW++ Q+DVKSTFLNG LE
Sbjct: 68  TFAPVARLDTIRMLLALAAQKGWNIHQMDVKSTFLNGYLE 107


>gb|AAL75752.1|AC037197_10 Putative copia-type polyprotein [Oryza sativa Japonica Group]
            gi|31429795|gb|AAP51797.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1350

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/97 (61%), Positives = 77/97 (79%)
 Frame = -3

Query: 291  IDKNQTWELVDLPFNKKPISVRWVYKLKLKPDGTIAKHKARLVARGFLQRPSLDYSEVFA 112
            I+KN TWELVD P ++K I V+WVYK KL PDG++ K+KARLVA+GF Q+P +DY E +A
Sbjct: 792  IEKNNTWELVDRPRDRKVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYA 851

Query: 111  PVARTETIRLVLALAISRGWSLFQLDVKSTFLNGPLE 1
            PVAR ETIR ++ALA  + W ++QLDVKS FLNG L+
Sbjct: 852  PVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLD 888


>emb|CAN63433.1| hypothetical protein VITISV_033829 [Vitis vinifera]
          Length = 1072

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/100 (63%), Positives = 77/100 (77%)
 Frame = -3

Query: 300 LKSIDKNQTWELVDLPFNKKPISVRWVYKLKLKPDGTIAKHKARLVARGFLQRPSLDYSE 121
           L  IDKN TWELVD P +KKPI V+WVY+ KL  DG+I KHKARLV +G+ Q   +D+SE
Sbjct: 668 LDMIDKNNTWELVDRPSHKKPIGVKWVYRTKLNSDGSINKHKARLVVKGYAQMFGVDFSE 727

Query: 120 VFAPVARTETIRLVLALAISRGWSLFQLDVKSTFLNGPLE 1
            FAPVAR +TIR++LALA  R W +++LDVKS FLNG LE
Sbjct: 728 TFAPVARLDTIRMLLALAAQRKWKIYKLDVKSAFLNGYLE 767


>emb|CAN64779.1| hypothetical protein VITISV_043230 [Vitis vinifera]
          Length = 1102

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/100 (62%), Positives = 79/100 (79%)
 Frame = -3

Query: 300 LKSIDKNQTWELVDLPFNKKPISVRWVYKLKLKPDGTIAKHKARLVARGFLQRPSLDYSE 121
           LK I+KNQTWELVD P +K+ I V+WVY+ KL  DG+I KHKARLV +G+ Q   +D+SE
Sbjct: 624 LKMIEKNQTWELVDKPRHKRAIGVKWVYRTKLNSDGSINKHKARLVVKGYAQMFGVDFSE 683

Query: 120 VFAPVARTETIRLVLALAISRGWSLFQLDVKSTFLNGPLE 1
            FAPVAR +TIR++LALA  +GW++ Q+DVKS FLNG LE
Sbjct: 684 TFAPVARLDTIRMLLALAAQKGWNIHQMDVKSAFLNGYLE 723


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  131 bits (329), Expect = 6e-29
 Identities = 59/97 (60%), Positives = 77/97 (79%)
 Frame = -3

Query: 291  IDKNQTWELVDLPFNKKPISVRWVYKLKLKPDGTIAKHKARLVARGFLQRPSLDYSEVFA 112
            I+KN TWELVD P +++ I V+WVYK KL PDG++ K+KARLVA+GF Q+P +DY E +A
Sbjct: 732  IEKNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGIDYYETYA 791

Query: 111  PVARTETIRLVLALAISRGWSLFQLDVKSTFLNGPLE 1
            PVAR ETIR ++ALA  + W ++QLDVKS FLNG L+
Sbjct: 792  PVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLD 828


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