BLASTX nr result

ID: Glycyrrhiza23_contig00026186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026186
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547917.1| PREDICTED: F-box protein At4g35930-like [Gly...   126   2e-27
ref|XP_003519858.1| PREDICTED: F-box protein At4g35930-like [Gly...   106   2e-21
ref|XP_003629266.1| F-box protein [Medicago truncatula] gi|35552...   106   2e-21
ref|XP_002531155.1| conserved hypothetical protein [Ricinus comm...    99   3e-19
ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cuc...    91   1e-16

>ref|XP_003547917.1| PREDICTED: F-box protein At4g35930-like [Glycine max]
          Length = 284

 Score =  126 bits (317), Expect = 2e-27
 Identities = 71/125 (56%), Positives = 86/125 (68%), Gaps = 16/125 (12%)
 Frame = +2

Query: 134 MGKVSSKEKSWR---RRQLRSSGNRYLRPGTLAQLRCNKPXXXXXXXXXXXXXXCTDIGK 304
           MGKVS KEK WR   RRQ+RSSGN+YLRPG LAQLRC+KP              CTD+GK
Sbjct: 1   MGKVSLKEKGWRVKGRRQVRSSGNKYLRPGALAQLRCSKP----SGSGGGGKCCCTDLGK 56

Query: 305 KRVAVLHSKKSSEG------------HEEDDKKVFDKSPLMLSPVNLVK-PTGLIGTPKT 445
           KRVAVLHS+KS  G            + E++ +VFDKSP+MLSPVNLVK  +G +GTPKT
Sbjct: 57  KRVAVLHSRKSGGGCGGGGGGSVQQRYVENNIRVFDKSPVMLSPVNLVKHNSGFVGTPKT 116

Query: 446 PRIEE 460
           PR+++
Sbjct: 117 PRLDD 121


>ref|XP_003519858.1| PREDICTED: F-box protein At4g35930-like [Glycine max]
          Length = 286

 Score =  106 bits (265), Expect = 2e-21
 Identities = 61/123 (49%), Positives = 74/123 (60%), Gaps = 14/123 (11%)
 Frame = +2

Query: 134 MGKVSSKEKSWRRRQLRSSGNRYLRPGTLAQLRCNKPXXXXXXXXXXXXXXCTDIGKKRV 313
           MGKVS KEK W+ +   S  N+YLRPG LAQLRC+KP              CTD+GKKRV
Sbjct: 1   MGKVSPKEKGWKVKVRSSGKNKYLRPGALAQLRCSKP-SSGSSGGGASKCCCTDLGKKRV 59

Query: 314 AVLHSKKSSEG-------------HEEDDKKVFDKSPLMLSPVNLVKPT-GLIGTPKTPR 451
           A  H++KS  G             + E + +VF KSPLMLSPVNLVK   G  GTPKTPR
Sbjct: 60  AFFHTRKSGCGCGGGGGGGSAHGYYGEKNTRVFYKSPLMLSPVNLVKHNGGFFGTPKTPR 119

Query: 452 IEE 460
           +++
Sbjct: 120 LDD 122


>ref|XP_003629266.1| F-box protein [Medicago truncatula] gi|355523288|gb|AET03742.1|
           F-box protein [Medicago truncatula]
          Length = 264

 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
 Frame = +2

Query: 134 MGKV-SSKEKSWRRRQLRSSGNRYLRPGTLAQLRCNKPXXXXXXXXXXXXXXCTDIGKKR 310
           MGKV ++ EK   RR+L+ SG +YL+PGTLAQLRC+K               C DIGKKR
Sbjct: 1   MGKVMTTTEKRKGRRKLKKSGTKYLKPGTLAQLRCSK----YLGSGSGAGRVCNDIGKKR 56

Query: 311 VAVLHSKKSSEGHEEDDKKVFDKSPLMLSPVNLVKPTGLIGTPKTPRIEE 460
           V +L+ +K+    E+ + KVFDKSPLMLSPVNLVK +  +GTPKTPRI+E
Sbjct: 57  VELLNLEKN----EDHEGKVFDKSPLMLSPVNLVKQSSSVGTPKTPRIDE 102


>ref|XP_002531155.1| conserved hypothetical protein [Ricinus communis]
           gi|223529268|gb|EEF31240.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 61/115 (53%), Positives = 77/115 (66%), Gaps = 6/115 (5%)
 Frame = +2

Query: 134 MGKVSSKEKSWR----RRQLRSSGNRYLRPGTLAQLRCNKPXXXXXXXXXXXXXXCTDIG 301
           MGKVS KE+  R    +R+LRSS +RYL+PG LAQLR NK               CTD+G
Sbjct: 1   MGKVSPKERDSRTPKQKRRLRSSSSRYLKPGALAQLRYNKASTATKS--------CTDLG 52

Query: 302 KKRVAVLHSKKSSEGHEE--DDKKVFDKSPLMLSPVNLVKPTGLIGTPKTPRIEE 460
           KKRVAVL +KK+ EG +   ++  V DKSPLMLSPV+L+K + L+ TPKTPR E+
Sbjct: 53  KKRVAVLTNKKA-EGDDIMIENNSVIDKSPLMLSPVDLLKHSYLVRTPKTPRTED 106


>ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cucumis sativus]
           gi|449524671|ref|XP_004169345.1| PREDICTED: F-box
           protein At4g35930-like [Cucumis sativus]
          Length = 266

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 54/113 (47%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
 Frame = +2

Query: 134 MGKVSSKE----KSWRRRQLRSSGNRYLRPGTLAQLRCNKPXXXXXXXXXXXXXXCTDIG 301
           MGKV + +    K  RRR+ + SG +YL+PG LA+LRC+K               CTD+G
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSK---------GSVAKSCTDLG 51

Query: 302 KKRVAVLHSKKSSEGHEEDDKKVFDKSPLMLSPVNLVKPTGLIGTPKTPRIEE 460
           +KRVAVL + K+      +DK V D+SPLMLSPV LV     IGTPKTPR+E+
Sbjct: 52  RKRVAVLDAGKTKRNVVLEDK-VSDRSPLMLSPVKLVMHINHIGTPKTPRVED 103


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