BLASTX nr result
ID: Glycyrrhiza23_contig00026186
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00026186 (460 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003547917.1| PREDICTED: F-box protein At4g35930-like [Gly... 126 2e-27 ref|XP_003519858.1| PREDICTED: F-box protein At4g35930-like [Gly... 106 2e-21 ref|XP_003629266.1| F-box protein [Medicago truncatula] gi|35552... 106 2e-21 ref|XP_002531155.1| conserved hypothetical protein [Ricinus comm... 99 3e-19 ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cuc... 91 1e-16 >ref|XP_003547917.1| PREDICTED: F-box protein At4g35930-like [Glycine max] Length = 284 Score = 126 bits (317), Expect = 2e-27 Identities = 71/125 (56%), Positives = 86/125 (68%), Gaps = 16/125 (12%) Frame = +2 Query: 134 MGKVSSKEKSWR---RRQLRSSGNRYLRPGTLAQLRCNKPXXXXXXXXXXXXXXCTDIGK 304 MGKVS KEK WR RRQ+RSSGN+YLRPG LAQLRC+KP CTD+GK Sbjct: 1 MGKVSLKEKGWRVKGRRQVRSSGNKYLRPGALAQLRCSKP----SGSGGGGKCCCTDLGK 56 Query: 305 KRVAVLHSKKSSEG------------HEEDDKKVFDKSPLMLSPVNLVK-PTGLIGTPKT 445 KRVAVLHS+KS G + E++ +VFDKSP+MLSPVNLVK +G +GTPKT Sbjct: 57 KRVAVLHSRKSGGGCGGGGGGSVQQRYVENNIRVFDKSPVMLSPVNLVKHNSGFVGTPKT 116 Query: 446 PRIEE 460 PR+++ Sbjct: 117 PRLDD 121 >ref|XP_003519858.1| PREDICTED: F-box protein At4g35930-like [Glycine max] Length = 286 Score = 106 bits (265), Expect = 2e-21 Identities = 61/123 (49%), Positives = 74/123 (60%), Gaps = 14/123 (11%) Frame = +2 Query: 134 MGKVSSKEKSWRRRQLRSSGNRYLRPGTLAQLRCNKPXXXXXXXXXXXXXXCTDIGKKRV 313 MGKVS KEK W+ + S N+YLRPG LAQLRC+KP CTD+GKKRV Sbjct: 1 MGKVSPKEKGWKVKVRSSGKNKYLRPGALAQLRCSKP-SSGSSGGGASKCCCTDLGKKRV 59 Query: 314 AVLHSKKSSEG-------------HEEDDKKVFDKSPLMLSPVNLVKPT-GLIGTPKTPR 451 A H++KS G + E + +VF KSPLMLSPVNLVK G GTPKTPR Sbjct: 60 AFFHTRKSGCGCGGGGGGGSAHGYYGEKNTRVFYKSPLMLSPVNLVKHNGGFFGTPKTPR 119 Query: 452 IEE 460 +++ Sbjct: 120 LDD 122 >ref|XP_003629266.1| F-box protein [Medicago truncatula] gi|355523288|gb|AET03742.1| F-box protein [Medicago truncatula] Length = 264 Score = 106 bits (265), Expect = 2e-21 Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 1/110 (0%) Frame = +2 Query: 134 MGKV-SSKEKSWRRRQLRSSGNRYLRPGTLAQLRCNKPXXXXXXXXXXXXXXCTDIGKKR 310 MGKV ++ EK RR+L+ SG +YL+PGTLAQLRC+K C DIGKKR Sbjct: 1 MGKVMTTTEKRKGRRKLKKSGTKYLKPGTLAQLRCSK----YLGSGSGAGRVCNDIGKKR 56 Query: 311 VAVLHSKKSSEGHEEDDKKVFDKSPLMLSPVNLVKPTGLIGTPKTPRIEE 460 V +L+ +K+ E+ + KVFDKSPLMLSPVNLVK + +GTPKTPRI+E Sbjct: 57 VELLNLEKN----EDHEGKVFDKSPLMLSPVNLVKQSSSVGTPKTPRIDE 102 >ref|XP_002531155.1| conserved hypothetical protein [Ricinus communis] gi|223529268|gb|EEF31240.1| conserved hypothetical protein [Ricinus communis] Length = 269 Score = 99.4 bits (246), Expect = 3e-19 Identities = 61/115 (53%), Positives = 77/115 (66%), Gaps = 6/115 (5%) Frame = +2 Query: 134 MGKVSSKEKSWR----RRQLRSSGNRYLRPGTLAQLRCNKPXXXXXXXXXXXXXXCTDIG 301 MGKVS KE+ R +R+LRSS +RYL+PG LAQLR NK CTD+G Sbjct: 1 MGKVSPKERDSRTPKQKRRLRSSSSRYLKPGALAQLRYNKASTATKS--------CTDLG 52 Query: 302 KKRVAVLHSKKSSEGHEE--DDKKVFDKSPLMLSPVNLVKPTGLIGTPKTPRIEE 460 KKRVAVL +KK+ EG + ++ V DKSPLMLSPV+L+K + L+ TPKTPR E+ Sbjct: 53 KKRVAVLTNKKA-EGDDIMIENNSVIDKSPLMLSPVDLLKHSYLVRTPKTPRTED 106 >ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cucumis sativus] gi|449524671|ref|XP_004169345.1| PREDICTED: F-box protein At4g35930-like [Cucumis sativus] Length = 266 Score = 90.9 bits (224), Expect = 1e-16 Identities = 54/113 (47%), Positives = 70/113 (61%), Gaps = 4/113 (3%) Frame = +2 Query: 134 MGKVSSKE----KSWRRRQLRSSGNRYLRPGTLAQLRCNKPXXXXXXXXXXXXXXCTDIG 301 MGKV + + K RRR+ + SG +YL+PG LA+LRC+K CTD+G Sbjct: 1 MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSK---------GSVAKSCTDLG 51 Query: 302 KKRVAVLHSKKSSEGHEEDDKKVFDKSPLMLSPVNLVKPTGLIGTPKTPRIEE 460 +KRVAVL + K+ +DK V D+SPLMLSPV LV IGTPKTPR+E+ Sbjct: 52 RKRVAVLDAGKTKRNVVLEDK-VSDRSPLMLSPVKLVMHINHIGTPKTPRVED 103