BLASTX nr result

ID: Glycyrrhiza23_contig00026180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026180
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601640.1| TBC1 domain family member [Medicago truncatu...   141   6e-32
ref|XP_003552768.1| PREDICTED: TBC1 domain family member 13-like...   112   4e-23
ref|XP_003629671.1| TBC1 domain family member [Medicago truncatu...   111   5e-23
ref|XP_004138936.1| PREDICTED: TBC1 domain family member 13-like...   111   7e-23
ref|XP_003532745.1| PREDICTED: TBC1 domain family member 13-like...   107   1e-21

>ref|XP_003601640.1| TBC1 domain family member [Medicago truncatula]
           gi|355490688|gb|AES71891.1| TBC1 domain family member
           [Medicago truncatula]
          Length = 432

 Score =  141 bits (355), Expect = 6e-32
 Identities = 77/147 (52%), Positives = 91/147 (61%)
 Frame = +3

Query: 3   RVPDWLNSPLWSSPSDHHRFSAVXXXXXXXXXXXXXXXIREDPPPTIIQHSRTNHNGIGI 182
           RVPDWLNSP+WSSP++ +RFSA                    PP T+++   + HN I  
Sbjct: 5   RVPDWLNSPMWSSPTEQNRFSATSYPSEPP----------SPPPVTVVEDPPSIHNAI-T 53

Query: 183 XXXXXXXXXXXXXXXXXXXXXXRQGQDQALLLAELSRKVIDMRELRRIASQGIPDASGLR 362
                                 R  Q Q+ LLAELSRKVIDMRELR+IASQGIPD+ GLR
Sbjct: 54  TSPPSSSSSSASTSSTDDMSISRLAQSQSQLLAELSRKVIDMRELRKIASQGIPDSPGLR 113

Query: 363 STVWKLLLGYLPPDRALWSTELAKKRS 443
           ST+WKLLLGYLPPDR+LWS+ELAKKRS
Sbjct: 114 STIWKLLLGYLPPDRSLWSSELAKKRS 140


>ref|XP_003552768.1| PREDICTED: TBC1 domain family member 13-like [Glycine max]
          Length = 424

 Score =  112 bits (279), Expect = 4e-23
 Identities = 70/148 (47%), Positives = 80/148 (54%), Gaps = 1/148 (0%)
 Frame = +3

Query: 3   RVPDWLNSPLWSSPSDHHRFSAVXXXXXXXXXXXXXXXIREDPPPTIIQHSRTNHNGIGI 182
           +VP+W+NS LWS+PSD                      +RE+PP        TN N    
Sbjct: 6   QVPEWMNSSLWSTPSD----------------PPASVSVREEPPTI-----PTNQNA--- 41

Query: 183 XXXXXXXXXXXXXXXXXXXXXXRQGQDQALLLAELSRKVIDMRELRRI-ASQGIPDASGL 359
                                 R  Q Q  LLAELSRKVIDMRELRR+ ASQGI DA  L
Sbjct: 42  -SPPLSSSSSVSSPTATADDISRHAQAQVQLLAELSRKVIDMRELRRVVASQGISDAGAL 100

Query: 360 RSTVWKLLLGYLPPDRALWSTELAKKRS 443
           R T+WKLLLGYLPPDR+LWS+ELAKKRS
Sbjct: 101 RPTLWKLLLGYLPPDRSLWSSELAKKRS 128


>ref|XP_003629671.1| TBC1 domain family member [Medicago truncatula]
           gi|355523693|gb|AET04147.1| TBC1 domain family member
           [Medicago truncatula]
          Length = 472

 Score =  111 bits (278), Expect = 5e-23
 Identities = 67/165 (40%), Positives = 88/165 (53%), Gaps = 18/165 (10%)
 Frame = +3

Query: 3   RVPDWLNSPLWSSPS-----------------DHHRFSAVXXXXXXXXXXXXXXXIREDP 131
           +VPDWLNS LWS+P+                      S V               +++ P
Sbjct: 5   KVPDWLNSSLWSAPTVPPSPATTTTTATTTTTTTEESSPVHSPISPPQPPSPPIVVQDPP 64

Query: 132 PPTIIQHSRTN-HNGIGIXXXXXXXXXXXXXXXXXXXXXXRQGQDQALLLAELSRKVIDM 308
           P  II+ SR++ H+   +                            A LLAELS+KV+D+
Sbjct: 65  PKQIIEDSRSDDHHDHDVPPSAYDV------------------SHHAQLLAELSKKVMDL 106

Query: 309 RELRRIASQGIPDASGLRSTVWKLLLGYLPPDRALWSTELAKKRS 443
           RELRRI+ QG+PD++G+RST+WKLLLGYLPPDRALWS+ELAKKRS
Sbjct: 107 RELRRISCQGVPDSAGIRSTLWKLLLGYLPPDRALWSSELAKKRS 151


>ref|XP_004138936.1| PREDICTED: TBC1 domain family member 13-like [Cucumis sativus]
           gi|449505611|ref|XP_004162521.1| PREDICTED: TBC1 domain
           family member 13-like [Cucumis sativus]
          Length = 446

 Score =  111 bits (277), Expect = 7e-23
 Identities = 67/152 (44%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
 Frame = +3

Query: 3   RVPDWLNSPLWSS-PSDH----HRFSAVXXXXXXXXXXXXXXXIREDPPPTIIQHSRTNH 167
           RVPDWLNS LWSS PS      HR+++                +   PP       RT  
Sbjct: 5   RVPDWLNSSLWSSAPSVDDDRLHRYTSEPAATTSSPEPVVQPPVPVPPPSATTAVVRTES 64

Query: 168 NGIGIXXXXXXXXXXXXXXXXXXXXXXRQGQDQALLLAELSRKVIDMRELRRIASQGIPD 347
                                           QA LL ELS+K+I++RELR+IASQGIPD
Sbjct: 65  PKSDTRDSRGNNNVTNDDNGTSSGPSAEDVSRQAQLLVELSKKIINLRELRKIASQGIPD 124

Query: 348 ASGLRSTVWKLLLGYLPPDRALWSTELAKKRS 443
             G+RSTVWKLLLGYLPPDR LW++ELAKKRS
Sbjct: 125 GPGIRSTVWKLLLGYLPPDRGLWTSELAKKRS 156


>ref|XP_003532745.1| PREDICTED: TBC1 domain family member 13-like [Glycine max]
          Length = 449

 Score =  107 bits (267), Expect = 1e-21
 Identities = 73/166 (43%), Positives = 81/166 (48%), Gaps = 20/166 (12%)
 Frame = +3

Query: 3   RVPDWLNSPLWSSPSDHHRFS----------------AVXXXXXXXXXXXXXXXIREDPP 134
           +VPDWLNS +WSS S     S                AV                  DPP
Sbjct: 14  KVPDWLNSSIWSSSSPSSPPSSAVASPFEQPPRPPSPAVVTPFEPPPPRPPSPPSVHDPP 73

Query: 135 PTI-IQHSRTNHNGIGIXXXXXXXXXXXXXXXXXXXXXXRQGQD---QALLLAELSRKVI 302
           PT  I  S    +G G                       R   D   QA LLAELS+KV+
Sbjct: 74  PTQRIDDSPREDHGDGF----------------------RSAHDVSRQAQLLAELSKKVV 111

Query: 303 DMRELRRIASQGIPDASGLRSTVWKLLLGYLPPDRALWSTELAKKR 440
           DM ELR +A QGIPDA+G+RSTVWKLLLGYLPPDR LWS ELAKKR
Sbjct: 112 DMSELRSLACQGIPDAAGIRSTVWKLLLGYLPPDRGLWSAELAKKR 157


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