BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026176
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   121   7e-26
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   114   6e-24
ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca...   113   1e-23
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...    97   1e-18
ref|XP_002298305.1| hypothetical protein POPTRDRAFT_172231 [Popu...    91   7e-17

>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1764

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/79 (74%), Positives = 63/79 (79%)
 Frame = +3

Query: 3    RLHQIYSKLKLEQNVAGVGPSHGNGSISGPFSRNGNPNHSYPFSRHMERQRGYKNVTTYQ 182
            RLHQIYSKL+ EQN AGVGPSH NGS+S  FSRNGNP H     RHMERQRG KN+  YQ
Sbjct: 1626 RLHQIYSKLRQEQNEAGVGPSHANGSVSVSFSRNGNPFH-----RHMERQRGLKNMAPYQ 1680

Query: 183  MPEPTNNTGMSEAWKRRRR 239
            MPEP +NTG SEAWKRRRR
Sbjct: 1681 MPEPVDNTGKSEAWKRRRR 1699


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1767

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/79 (72%), Positives = 62/79 (78%)
 Frame = +3

Query: 3    RLHQIYSKLKLEQNVAGVGPSHGNGSISGPFSRNGNPNHSYPFSRHMERQRGYKNVTTYQ 182
            RLHQIYSKL+ EQ+ A VGPSH NGS+S  FSRNGNP     F  HMERQRG KN+ TYQ
Sbjct: 1629 RLHQIYSKLRQEQDEAEVGPSHTNGSVSVSFSRNGNP-----FRFHMERQRGLKNMATYQ 1683

Query: 183  MPEPTNNTGMSEAWKRRRR 239
            MPEP +NTG SEAWKRRRR
Sbjct: 1684 MPEPVDNTGKSEAWKRRRR 1702


>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 2083

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/79 (72%), Positives = 63/79 (79%)
 Frame = +3

Query: 3    RLHQIYSKLKLEQNVAGVGPSHGNGSISGPFSRNGNPNHSYPFSRHMERQRGYKNVTTYQ 182
            RLHQIYSKLKLEQN  GVG S  NGS+SGPFSRNGNPN S+P  R MERQ  ++NVT + 
Sbjct: 1943 RLHQIYSKLKLEQNAVGVGSSLPNGSVSGPFSRNGNPNSSFP--RPMERQTRFQNVTAHP 2000

Query: 183  MPEPTNNTGMSEAWKRRRR 239
            M E T +TGMSEAWKRRRR
Sbjct: 2001 MREQTYDTGMSEAWKRRRR 2019


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355518633|gb|AET00257.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1739

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/80 (66%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3    RLHQIYSKLKLEQ-NVAGVGPSHGNGSISGPFSRNGNPNHSYPFSRHMERQRGYKNVTTY 179
            RLHQIYSKLK EQ + +GVGPS         FSRNGNP H     RHMERQRG+KN+  Y
Sbjct: 1611 RLHQIYSKLKQEQEDDSGVGPS-------ASFSRNGNPFH-----RHMERQRGFKNMANY 1658

Query: 180  QMPEPTNNTGMSEAWKRRRR 239
            QM EP NNTG SEAWKRRRR
Sbjct: 1659 QMSEPDNNTGKSEAWKRRRR 1678


>ref|XP_002298305.1| hypothetical protein POPTRDRAFT_172231 [Populus trichocarpa]
           gi|222845563|gb|EEE83110.1| hypothetical protein
           POPTRDRAFT_172231 [Populus trichocarpa]
          Length = 419

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/83 (57%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
 Frame = +3

Query: 3   RLHQIYSKLKLEQNV-AGVGPSHGNGSISGPFSRNGNPNHSYPFSRHMERQRGYKNVTTY 179
           RL QIYSKLK EQ   AGVGPSH NG+  G   ++G+ N+  P SR+ ERQRGYKN + Y
Sbjct: 289 RLRQIYSKLKQEQEEDAGVGPSHANGAAYGSVDKDGDSNNFPPLSRNFERQRGYKNASAY 348

Query: 180 QMPEPTN---NTGMSEAWKRRRR 239
            M EP N   + G  EAWKRRRR
Sbjct: 349 PMSEPINRGHDAGKFEAWKRRRR 371