BLASTX nr result

ID: Glycyrrhiza23_contig00026170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026170
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546708.1| PREDICTED: uncharacterized protein LOC100783...    92   6e-17
ref|XP_003627923.1| hypothetical protein MTR_8g040080 [Medicago ...    92   6e-17
ref|NP_001235674.1| uncharacterized protein LOC100306482 [Glycin...    84   1e-14
gb|AFK35294.1| unknown [Medicago truncatula]                           80   2e-13
ref|XP_003598460.1| Sigma factor binding protein [Medicago trunc...    80   2e-13

>ref|XP_003546708.1| PREDICTED: uncharacterized protein LOC100783939 [Glycine max]
          Length = 122

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 63/114 (55%), Positives = 70/114 (61%), Gaps = 10/114 (8%)
 Frame = -1

Query: 403 TYISSPVKVKTSASNFRALVQELTGQDSNVAEIT-PMPSLLG-------TTNYSAPQQQQ 248
           TYISSPVKVKTSASNFRALVQELTGQ SNVAE + PM    G       T ++   + QQ
Sbjct: 18  TYISSPVKVKTSASNFRALVQELTGQYSNVAETSIPMEEDNGHSERVHRTHHHHESETQQ 77

Query: 247 WRVQDHVPQYGYLHDEATLL--KHDYSHEFLSRSTLLPLNNQHQLPYDLLSFPM 92
           WRV           DE T L   H+YS EFLSRS + P N Q  L YDL+SF M
Sbjct: 78  WRVN---------VDEGTNLMKPHEYS-EFLSRSLMEPFNQQQLLQYDLMSFDM 121


>ref|XP_003627923.1| hypothetical protein MTR_8g040080 [Medicago truncatula]
           gi|355521945|gb|AET02399.1| hypothetical protein
           MTR_8g040080 [Medicago truncatula]
          Length = 118

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 63/112 (56%), Positives = 71/112 (63%), Gaps = 8/112 (7%)
 Frame = -1

Query: 403 TYISSPVKVKTSASNFRALVQELTGQDSNVAEITPMP--------SLLGTTNYSAPQQQQ 248
           TYISSPVKVKT+ASNFRALVQELTGQDSNVAE T MP          +    YS    QQ
Sbjct: 17  TYISSPVKVKTNASNFRALVQELTGQDSNVAETTTMPLQEKYCDDERVNKGAYST--HQQ 74

Query: 247 WRVQDHVPQYGYLHDEATLLKHDYSHEFLSRSTLLPLNNQHQLPYDLLSFPM 92
           WRV DHVP       + T LK DYS EFLSR + +   ++H +  DLLSF M
Sbjct: 75  WRV-DHVPH------QNTFLKPDYS-EFLSRQSFVEPLSEH-VQCDLLSFDM 117


>ref|NP_001235674.1| uncharacterized protein LOC100306482 [Glycine max]
           gi|255628679|gb|ACU14684.1| unknown [Glycine max]
          Length = 123

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 57/114 (50%), Positives = 64/114 (56%), Gaps = 10/114 (8%)
 Frame = -1

Query: 403 TYISSPVKVKTSASNFRALVQELTGQDSNVAEITPMPSLLGTTNYS----------APQQ 254
           TYISSPVKVKTSASNFRALVQELTGQ SNVAE T MP       +S            + 
Sbjct: 18  TYISSPVKVKTSASNFRALVQELTGQYSNVAE-TSMPMEEEENGHSERVHKTHLLHESET 76

Query: 253 QQWRVQDHVPQYGYLHDEATLLKHDYSHEFLSRSTLLPLNNQHQLPYDLLSFPM 92
           Q WRV         + +   L+K     E+LSRS + P N Q  L YDLLSF M
Sbjct: 77  QLWRVD--------VDEGTNLMKPLEYSEYLSRSLMEPFNQQQHLQYDLLSFDM 122


>gb|AFK35294.1| unknown [Medicago truncatula]
          Length = 135

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
 Frame = -1

Query: 403 TYISSPVKVKTSASNFRALVQELTGQDSNVA----EITPMPSLLGTTNYSAPQQQQWRVQ 236
           TYISSP+KVKTSASNFRALVQELTGQDSNVA    E+     +    N      +QW   
Sbjct: 32  TYISSPMKVKTSASNFRALVQELTGQDSNVADMFVEVNDFVHVDDVQNQQKNSIEQWS-S 90

Query: 235 DHVPQYGYLHDEATLLKHDYSHEFLSRSTLLPLNNQHQLPYDLLSFPM 92
           D+    G++ D +T +K     ++  RS++ PLN   QL YD LSF M
Sbjct: 91  DNNSSEGFMPDYSTWMK--LEDDYNLRSSMEPLNG--QLQYDFLSFDM 134


>ref|XP_003598460.1| Sigma factor binding protein [Medicago truncatula]
           gi|355487508|gb|AES68711.1| Sigma factor binding protein
           [Medicago truncatula]
          Length = 128

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 52/108 (48%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
 Frame = -1

Query: 403 TYISSPVKVKTSASNFRALVQELTGQDSNVA----EITPMPSLLGTTNYSAPQQQQWRVQ 236
           TYISSP+KVKTSASNFRALVQELTGQDSNVA    E+     +    N      +QW   
Sbjct: 25  TYISSPMKVKTSASNFRALVQELTGQDSNVADMFVEVNDFVHVDDVQNQQKNSIEQWS-S 83

Query: 235 DHVPQYGYLHDEATLLKHDYSHEFLSRSTLLPLNNQHQLPYDLLSFPM 92
           D+    G++ D +T +K     ++  RS++ PLN   QL YD LSF M
Sbjct: 84  DNNSSEGFMPDYSTWMK--LEDDYNLRSSMEPLNG--QLQYDFLSFDM 127


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