BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026154
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ...   217   1e-54
ref|XP_003518581.1| PREDICTED: pentatricopeptide repeat-containi...   187   9e-46
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   162   4e-38
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   162   4e-38
ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37

>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519426|gb|AET01050.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  217 bits (552), Expect = 1e-54
 Identities = 108/151 (71%), Positives = 127/151 (84%), Gaps = 1/151 (0%)
 Frame = +3

Query: 90  KQKEWNKAISTSIRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEA 269
           KQK+WNKAISTSIRSRLSKLC++GQPHLA HLL++LPRPSTVVWNSVIIGFICNN+P +A
Sbjct: 40  KQKQWNKAISTSIRSRLSKLCREGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQA 99

Query: 270 LLLYSQMRSTPN-TRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRI 446
           LLLY++MRS  + + FDPYTFSSTLKACALT D+++GKA+H+HFLRS SN  +N GPSRI
Sbjct: 100 LLLYAKMRSNSSCSTFDPYTFSSTLKACALTKDILTGKAIHSHFLRSHSN--TNTGPSRI 157

Query: 447 VYNSLLNMYSSCXXXXXXXXXXQHDYVLKAF 539
           VYNSLLNMY+SC          QH+Y L  F
Sbjct: 158 VYNSLLNMYASC----------QHEYALNVF 178


>ref|XP_003518581.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Glycine max]
          Length = 755

 Score =  187 bits (475), Expect = 9e-46
 Identities = 97/139 (69%), Positives = 112/139 (80%)
 Frame = +3

Query: 123 SIRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTP 302
           SIRSRLSKLCQQGQPHLARHLL+TLPR S+ VWN+VIIGFICN+MPLEAL LY++M+S+P
Sbjct: 24  SIRSRLSKLCQQGQPHLARHLLDTLPRASSAVWNTVIIGFICNHMPLEALHLYAEMKSSP 83

Query: 303 NTRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSSC 482
           +T  D YTFSSTLKAC+LT +L++GKA+H+HFLRSQSN       SRIVYNSLLNMYS C
Sbjct: 84  DTPSDCYTFSSTLKACSLTQNLLAGKAIHSHFLRSQSN-------SRIVYNSLLNMYSVC 136

Query: 483 XXXXXXXXXXQHDYVLKAF 539
                     Q DYVLK F
Sbjct: 137 --LPPSTVQSQLDYVLKVF 153


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  162 bits (409), Expect = 4e-38
 Identities = 77/120 (64%), Positives = 95/120 (79%)
 Frame = +3

Query: 123 SIRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTP 302
           +IRSRLS LC+QG PH A HL +++PRP+TV+WN++IIGFICNNMP++ALL Y++MR++P
Sbjct: 39  TIRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASP 98

Query: 303 NTRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSSC 482
           + +FD YTFSSTLKACA    L  GKALH H LRS        G SRIVYNSLLNMYS+C
Sbjct: 99  SPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHF------GSSRIVYNSLLNMYSTC 152



 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 35/119 (29%), Positives = 60/119 (50%)
 Frame = +3

Query: 126 IRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTPN 305
           + S +    + G    AR + +     +T VWN++I G++ NN P+EA+ L+ Q+  +  
Sbjct: 258 VSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQ 317

Query: 306 TRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSSC 482
              D  TF S L A +    L  G+ LHA+ L+S +          ++ N+++ MYS C
Sbjct: 318 FVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTI------LQVVILNAIIVMYSRC 370


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  162 bits (409), Expect = 4e-38
 Identities = 77/120 (64%), Positives = 95/120 (79%)
 Frame = +3

Query: 123 SIRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTP 302
           +IRSRLS LC+QG PH A HL +++PRP+TV+WN++IIGFICNNMP++ALL Y++MR++P
Sbjct: 39  TIRSRLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASP 98

Query: 303 NTRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSSC 482
           + +FD YTFSSTLKACA    L  GKALH H LRS        G SRIVYNSLLNMYS+C
Sbjct: 99  SPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHF------GSSRIVYNSLLNMYSTC 152



 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 35/119 (29%), Positives = 60/119 (50%)
 Frame = +3

Query: 126 IRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTPN 305
           + S +    + G    AR + +     +T VWN++I G++ NN P+EA+ L+ Q+  +  
Sbjct: 258 VSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQ 317

Query: 306 TRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSSC 482
              D  TF S L A +    L  G+ LHA+ L+S +          ++ N+++ MYS C
Sbjct: 318 FXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTI------LQVVILNAIIVMYSRC 370


>ref|XP_002308773.1| predicted protein [Populus trichocarpa] gi|222854749|gb|EEE92296.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score =  159 bits (401), Expect = 3e-37
 Identities = 78/121 (64%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
 Frame = +3

Query: 123 SIRSRLSKLCQQGQPHLARHLLETLPRPSTVVWNSVIIGFICNNMPLEALLLYSQMRSTP 302
           SIRSRLSKLCQ+GQPH+A  L +T PRP+TV+ N++IIGFICNN+PLEA+L YS+++S+ 
Sbjct: 44  SIRSRLSKLCQEGQPHIALQLFDTFPRPTTVICNTIIIGFICNNLPLEAILFYSKLKSSS 103

Query: 303 -NTRFDPYTFSSTLKACALTHDLISGKALHAHFLRSQSNPISNPGPSRIVYNSLLNMYSS 479
             T+FD YT+SSTLKACA T  L  G+A+H H +R  SN      PSRIVYNSLLNMYSS
Sbjct: 104 LGTKFDSYTYSSTLKACAETRSLKIGRAIHCHLIRCLSN------PSRIVYNSLLNMYSS 157

Query: 480 C 482
           C
Sbjct: 158 C 158