BLASTX nr result

ID: Glycyrrhiza23_contig00026140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026140
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592892.1| Splicing factor U2af 38 kDa subunit [Medicag...    74   1e-11
gb|ABO80462.1| U2 auxiliary factor small subunit [Medicago trunc...    74   1e-11
ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containin...    57   2e-06
emb|CBI29641.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247...    56   3e-06

>ref|XP_003592892.1| Splicing factor U2af 38 kDa subunit [Medicago truncatula]
           gi|355481940|gb|AES63143.1| Splicing factor U2af 38 kDa
           subunit [Medicago truncatula]
          Length = 300

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = +3

Query: 3   EEARLNDPEEQRKRLLLEQQEADRILRDRIAFEESERAWILR 128
           EEARLNDPEE+RKR+LLEQQEA+RI RDRIAFEE E+AWI++
Sbjct: 32  EEARLNDPEEERKRILLEQQEAERIERDRIAFEEREKAWIIK 73


>gb|ABO80462.1| U2 auxiliary factor small subunit [Medicago truncatula]
          Length = 251

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = +3

Query: 3   EEARLNDPEEQRKRLLLEQQEADRILRDRIAFEESERAWILR 128
           EEARLNDPEE+RKR+LLEQQEA+RI RDRIAFEE E+AWI++
Sbjct: 32  EEARLNDPEEERKRILLEQQEAERIERDRIAFEEREKAWIIK 73


>ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
           [Glycine max]
          Length = 587

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = +3

Query: 3   EEARLNDPEEQRKRLLLEQQEADRILRDRIAFEESERAWI 122
           EE RLN+PEEQR+  LLEQQEA+R+ RD I F E E+AW+
Sbjct: 30  EEERLNNPEEQRRMQLLEQQEAERMQRDMILFREREKAWM 69


>emb|CBI29641.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +3

Query: 3   EEARLNDPEEQRKRLLLEQQEADRILRDRIAFEESERAWI 122
           EEA+LNDPEEQ +  L+EQ+EA+R  R+R  FEESER W+
Sbjct: 35  EEAKLNDPEEQERMRLMEQEEAERCERERRKFEESERMWL 74


>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
          Length = 887

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +3

Query: 3   EEARLNDPEEQRKRLLLEQQEADRILRDRIAFEESERAWI 122
           EEA+LNDPEEQ +  L+EQ+EA+R  R+R  FEESER W+
Sbjct: 30  EEAKLNDPEEQERMRLMEQEEAERCERERRKFEESERMWL 69


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