BLASTX nr result
ID: Glycyrrhiza23_contig00026140
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00026140 (234 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003592892.1| Splicing factor U2af 38 kDa subunit [Medicag... 74 1e-11 gb|ABO80462.1| U2 auxiliary factor small subunit [Medicago trunc... 74 1e-11 ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containin... 57 2e-06 emb|CBI29641.3| unnamed protein product [Vitis vinifera] 56 3e-06 ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247... 56 3e-06 >ref|XP_003592892.1| Splicing factor U2af 38 kDa subunit [Medicago truncatula] gi|355481940|gb|AES63143.1| Splicing factor U2af 38 kDa subunit [Medicago truncatula] Length = 300 Score = 73.9 bits (180), Expect = 1e-11 Identities = 34/42 (80%), Positives = 40/42 (95%) Frame = +3 Query: 3 EEARLNDPEEQRKRLLLEQQEADRILRDRIAFEESERAWILR 128 EEARLNDPEE+RKR+LLEQQEA+RI RDRIAFEE E+AWI++ Sbjct: 32 EEARLNDPEEERKRILLEQQEAERIERDRIAFEEREKAWIIK 73 >gb|ABO80462.1| U2 auxiliary factor small subunit [Medicago truncatula] Length = 251 Score = 73.9 bits (180), Expect = 1e-11 Identities = 34/42 (80%), Positives = 40/42 (95%) Frame = +3 Query: 3 EEARLNDPEEQRKRLLLEQQEADRILRDRIAFEESERAWILR 128 EEARLNDPEE+RKR+LLEQQEA+RI RDRIAFEE E+AWI++ Sbjct: 32 EEARLNDPEEERKRILLEQQEAERIERDRIAFEEREKAWIIK 73 >ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like [Glycine max] Length = 587 Score = 56.6 bits (135), Expect = 2e-06 Identities = 26/40 (65%), Positives = 32/40 (80%) Frame = +3 Query: 3 EEARLNDPEEQRKRLLLEQQEADRILRDRIAFEESERAWI 122 EE RLN+PEEQR+ LLEQQEA+R+ RD I F E E+AW+ Sbjct: 30 EEERLNNPEEQRRMQLLEQQEAERMQRDMILFREREKAWM 69 >emb|CBI29641.3| unnamed protein product [Vitis vinifera] Length = 875 Score = 55.8 bits (133), Expect = 3e-06 Identities = 25/40 (62%), Positives = 32/40 (80%) Frame = +3 Query: 3 EEARLNDPEEQRKRLLLEQQEADRILRDRIAFEESERAWI 122 EEA+LNDPEEQ + L+EQ+EA+R R+R FEESER W+ Sbjct: 35 EEAKLNDPEEQERMRLMEQEEAERCERERRKFEESERMWL 74 >ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera] Length = 887 Score = 55.8 bits (133), Expect = 3e-06 Identities = 25/40 (62%), Positives = 32/40 (80%) Frame = +3 Query: 3 EEARLNDPEEQRKRLLLEQQEADRILRDRIAFEESERAWI 122 EEA+LNDPEEQ + L+EQ+EA+R R+R FEESER W+ Sbjct: 30 EEAKLNDPEEQERMRLMEQEEAERCERERRKFEESERMWL 69