BLASTX nr result

ID: Glycyrrhiza23_contig00026121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026121
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637285.1| ABC transporter C family member [Medicago tr...    81   1e-13
ref|XP_003542136.1| PREDICTED: ABC transporter C family member 1...    70   2e-10
gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]              63   3e-08
emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catha...    63   3e-08

>ref|XP_003637285.1| ABC transporter C family member [Medicago truncatula]
           gi|355503220|gb|AES84423.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1539

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/84 (58%), Positives = 56/84 (66%), Gaps = 8/84 (9%)
 Frame = +1

Query: 1   LICPNSPFV*DGKGFSECFED-------IFLGFAVNIVTIVMTVVLGFNQKI-GRGVQRS 156
           LICPNSP V   K     +E         F GFAVN+VTI M +VLG  QKI GRG QRS
Sbjct: 12  LICPNSPSV-PFKIIKVLYEFHISLVLVYFTGFAVNVVTIAMILVLGIKQKISGRGTQRS 70

Query: 157 DAQITLPEKFVLGFVPAVGACLSI 228
           DAQ++L EKFVL FVPA+GAC S+
Sbjct: 71  DAQMSLLEKFVLYFVPAIGACCSV 94


>ref|XP_003542136.1| PREDICTED: ABC transporter C family member 13-like [Glycine max]
          Length = 1384

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +1

Query: 103 MTVVLGFNQKIGRGVQRSDAQITLPEKFVLGFVPAVGACLSI 228
           M VVLGFNQKIGRG + SD+Q+TLPEKFVL  +PAVGACLSI
Sbjct: 1   MIVVLGFNQKIGRGFRLSDSQMTLPEKFVLNLIPAVGACLSI 42


>gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]
          Length = 296

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/74 (43%), Positives = 48/74 (64%)
 Frame = +1

Query: 4   ICPNSPFV*DGKGFSECFEDIFLGFAVNIVTIVMTVVLGFNQKIGRGVQRSDAQITLPEK 183
           ICP+SP+V +G G S CF +I LGF  N+ T+++ V++G  ++ GR  +R    I L  K
Sbjct: 7   ICPDSPYVWNGNGVSRCFSNIVLGFGANMATLIVIVLVGVTRRSGRRSRR----IHLSAK 62

Query: 184 FVLGFVPAVGACLS 225
            +L  VPA+GA +S
Sbjct: 63  ILLFTVPALGAFVS 76


>emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catharanthus roseus]
          Length = 1457

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/74 (43%), Positives = 48/74 (64%)
 Frame = +1

Query: 4   ICPNSPFV*DGKGFSECFEDIFLGFAVNIVTIVMTVVLGFNQKIGRGVQRSDAQITLPEK 183
           ICP+SP+V +G G S CF +I LGF  N+ T+++ V++G  ++ GR  +R    I L  K
Sbjct: 7   ICPDSPYVWNGNGVSRCFSNIVLGFGANMATLIVIVLVGVTRRSGRRSRR----IHLSAK 62

Query: 184 FVLGFVPAVGACLS 225
            +L  VPA+GA +S
Sbjct: 63  ILLFTVPALGAFVS 76


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