BLASTX nr result
ID: Glycyrrhiza23_contig00026117
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00026117 (251 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ... 142 3e-32 ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containi... 138 4e-31 ref|XP_003538888.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 132 2e-29 ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|2... 118 6e-25 emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera] 111 7e-23 >ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355513563|gb|AES95186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 665 Score = 142 bits (358), Expect = 3e-32 Identities = 65/82 (79%), Positives = 76/82 (92%) Frame = +3 Query: 3 ALKNGVDSVLPVQNSLIHMYASCGDVKLARVLFEGMLTRDMVSWNSMIDGYVKVGDLSGA 182 A+KNGVD VLPV+NSL HMY SCG V++ARV+F+GM++RD+VSWNSMIDGYVKVGDLS A Sbjct: 163 AVKNGVDFVLPVENSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAA 222 Query: 183 HKLFDVMPERNLVTWNVMISGF 248 HKLFDVMPERNLVTWN +ISG+ Sbjct: 223 HKLFDVMPERNLVTWNCLISGY 244 >ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containing protein At3g51320-like [Glycine max] Length = 579 Score = 138 bits (348), Expect = 4e-31 Identities = 64/83 (77%), Positives = 76/83 (91%) Frame = +3 Query: 3 ALKNGVDSVLPVQNSLIHMYASCGDVKLARVLFEGMLTRDMVSWNSMIDGYVKVGDLSGA 182 A KNGVDSVLPVQNSLIHMY CG V+LARVLF+GML+RD+VSWNS+I+G++ VG+L+ A Sbjct: 165 ATKNGVDSVLPVQNSLIHMYVCCGGVQLARVLFDGMLSRDLVSWNSIINGHMMVGELNAA 224 Query: 183 HKLFDVMPERNLVTWNVMISGFL 251 H+LFD MPERNLVTWNVMISG+L Sbjct: 225 HRLFDKMPERNLVTWNVMISGYL 247 >ref|XP_003538888.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g51320-like [Glycine max] Length = 560 Score = 132 bits (333), Expect = 2e-29 Identities = 63/83 (75%), Positives = 75/83 (90%) Frame = +3 Query: 3 ALKNGVDSVLPVQNSLIHMYASCGDVKLARVLFEGMLTRDMVSWNSMIDGYVKVGDLSGA 182 A KNGVDSVLPVQNSLIHMYA CGDV+LARVLF+GML+RD+VS NS+IDG + VG+L+ A Sbjct: 182 ATKNGVDSVLPVQNSLIHMYACCGDVQLARVLFDGMLSRDLVSRNSIIDGIMMVGELNAA 241 Query: 183 HKLFDVMPERNLVTWNVMISGFL 251 H+L + MP+RNLVTWNVMISG+L Sbjct: 242 HRLLNEMPDRNLVTWNVMISGYL 264 >ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|222836729|gb|EEE75122.1| predicted protein [Populus trichocarpa] Length = 564 Score = 118 bits (295), Expect = 6e-25 Identities = 52/83 (62%), Positives = 69/83 (83%) Frame = +3 Query: 3 ALKNGVDSVLPVQNSLIHMYASCGDVKLARVLFEGMLTRDMVSWNSMIDGYVKVGDLSGA 182 A+KNGVD +LPV+NSLIH Y CGD+ LA+ +F+ M RD+VSWNS+IDGY +G+L A Sbjct: 173 AVKNGVDRILPVENSLIHCYGCCGDMGLAKKVFDEMSHRDLVSWNSIIDGYATLGELGIA 232 Query: 183 HKLFDVMPERNLVTWNVMISGFL 251 H LF+VMPERN+V+WN++ISG+L Sbjct: 233 HGLFEVMPERNVVSWNILISGYL 255 >emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera] Length = 901 Score = 111 bits (277), Expect = 7e-23 Identities = 50/83 (60%), Positives = 64/83 (77%) Frame = +3 Query: 3 ALKNGVDSVLPVQNSLIHMYASCGDVKLARVLFEGMLTRDMVSWNSMIDGYVKVGDLSGA 182 A+KNGVD+VL VQNS++HMY CG V+ A +F M RD+VSWNS+ID Y K+G L A Sbjct: 496 AIKNGVDNVLDVQNSMVHMYGCCGVVEXAEKVFGEMSKRDLVSWNSIIDAYAKLGHLVLA 555 Query: 183 HKLFDVMPERNLVTWNVMISGFL 251 H+LFD MPERN V+WN+M+ G+L Sbjct: 556 HRLFDAMPERNAVSWNIMMGGYL 578