BLASTX nr result

ID: Glycyrrhiza23_contig00026117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026117
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ...   142   3e-32
ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|XP_003538888.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   132   2e-29
ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]   111   7e-23

>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513563|gb|AES95186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score =  142 bits (358), Expect = 3e-32
 Identities = 65/82 (79%), Positives = 76/82 (92%)
 Frame = +3

Query: 3   ALKNGVDSVLPVQNSLIHMYASCGDVKLARVLFEGMLTRDMVSWNSMIDGYVKVGDLSGA 182
           A+KNGVD VLPV+NSL HMY SCG V++ARV+F+GM++RD+VSWNSMIDGYVKVGDLS A
Sbjct: 163 AVKNGVDFVLPVENSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAA 222

Query: 183 HKLFDVMPERNLVTWNVMISGF 248
           HKLFDVMPERNLVTWN +ISG+
Sbjct: 223 HKLFDVMPERNLVTWNCLISGY 244


>ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Glycine max]
          Length = 579

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/83 (77%), Positives = 76/83 (91%)
 Frame = +3

Query: 3   ALKNGVDSVLPVQNSLIHMYASCGDVKLARVLFEGMLTRDMVSWNSMIDGYVKVGDLSGA 182
           A KNGVDSVLPVQNSLIHMY  CG V+LARVLF+GML+RD+VSWNS+I+G++ VG+L+ A
Sbjct: 165 ATKNGVDSVLPVQNSLIHMYVCCGGVQLARVLFDGMLSRDLVSWNSIINGHMMVGELNAA 224

Query: 183 HKLFDVMPERNLVTWNVMISGFL 251
           H+LFD MPERNLVTWNVMISG+L
Sbjct: 225 HRLFDKMPERNLVTWNVMISGYL 247


>ref|XP_003538888.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g51320-like [Glycine max]
          Length = 560

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/83 (75%), Positives = 75/83 (90%)
 Frame = +3

Query: 3   ALKNGVDSVLPVQNSLIHMYASCGDVKLARVLFEGMLTRDMVSWNSMIDGYVKVGDLSGA 182
           A KNGVDSVLPVQNSLIHMYA CGDV+LARVLF+GML+RD+VS NS+IDG + VG+L+ A
Sbjct: 182 ATKNGVDSVLPVQNSLIHMYACCGDVQLARVLFDGMLSRDLVSRNSIIDGIMMVGELNAA 241

Query: 183 HKLFDVMPERNLVTWNVMISGFL 251
           H+L + MP+RNLVTWNVMISG+L
Sbjct: 242 HRLLNEMPDRNLVTWNVMISGYL 264


>ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|222836729|gb|EEE75122.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  118 bits (295), Expect = 6e-25
 Identities = 52/83 (62%), Positives = 69/83 (83%)
 Frame = +3

Query: 3   ALKNGVDSVLPVQNSLIHMYASCGDVKLARVLFEGMLTRDMVSWNSMIDGYVKVGDLSGA 182
           A+KNGVD +LPV+NSLIH Y  CGD+ LA+ +F+ M  RD+VSWNS+IDGY  +G+L  A
Sbjct: 173 AVKNGVDRILPVENSLIHCYGCCGDMGLAKKVFDEMSHRDLVSWNSIIDGYATLGELGIA 232

Query: 183 HKLFDVMPERNLVTWNVMISGFL 251
           H LF+VMPERN+V+WN++ISG+L
Sbjct: 233 HGLFEVMPERNVVSWNILISGYL 255


>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score =  111 bits (277), Expect = 7e-23
 Identities = 50/83 (60%), Positives = 64/83 (77%)
 Frame = +3

Query: 3   ALKNGVDSVLPVQNSLIHMYASCGDVKLARVLFEGMLTRDMVSWNSMIDGYVKVGDLSGA 182
           A+KNGVD+VL VQNS++HMY  CG V+ A  +F  M  RD+VSWNS+ID Y K+G L  A
Sbjct: 496 AIKNGVDNVLDVQNSMVHMYGCCGVVEXAEKVFGEMSKRDLVSWNSIIDAYAKLGHLVLA 555

Query: 183 HKLFDVMPERNLVTWNVMISGFL 251
           H+LFD MPERN V+WN+M+ G+L
Sbjct: 556 HRLFDAMPERNAVSWNIMMGGYL 578


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