BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026113
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629914.1| Pentatricopeptide repeat-containing protein ...   219   4e-55
ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containi...   205   4e-51
ref|NP_199458.1| pentatricopeptide repeat-containing protein [Ar...   165   7e-39
ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containi...   162   4e-38
ref|XP_002865191.1| pentatricopeptide repeat-containing protein ...   162   6e-38

>ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523936|gb|AET04390.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  219 bits (557), Expect = 4e-55
 Identities = 111/183 (60%), Positives = 135/183 (73%)
 Frame = -3

Query: 552 CTTTPFSTAEGVTTRIRNPKSSPFKTKPHNNSPSLLSQFHHHLKNQRVDEARAVLNQIPS 373
           C TTPF      TT I+NPKSS         S SL   F +HLKNQ++D ARAV N+IPS
Sbjct: 41  CRTTPF------TTLIQNPKSS---------STSLNFTFLNHLKNQKLDSARAVFNKIPS 85

Query: 372 PHVSLYTKTLLAYAYNHRLHDAIKLFHQIPPNSRDPISWNSLIKACIQNGDLKTALKLFD 193
           PHVSLYTK LLAYA+N+ LH+AI LF+QIP N++D ISWNS+IKA I   D  TA+KLFD
Sbjct: 86  PHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFD 145

Query: 192 QMPHRTNVSWTTLVNAFLNLGRVEDAETLFRTMPPHDRDVAAWNSMVNGYCANGRVDDAL 13
           +MP R ++SWTT+++ FL+ GRV +AE  F  MP  D+DVA WN+MVNGYC NGRV+DAL
Sbjct: 146 EMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDAL 205

Query: 12  RLF 4
           RLF
Sbjct: 206 RLF 208



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/125 (24%), Positives = 62/125 (49%)
 Frame = -3

Query: 393 VLNQIPSPHVSLYTKTLLAYAYNHRLHDAIKLFHQIPPNSRDPISWNSLIKACIQNGDLK 214
           + +++P  +   +T  +  +    R+++A + F+ +P   +D  +WN+++     NG + 
Sbjct: 143 LFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVN 202

Query: 213 TALKLFDQMPHRTNVSWTTLVNAFLNLGRVEDAETLFRTMPPHDRDVAAWNSMVNGYCAN 34
            AL+LF QMP R  +SWT+++      G+   A   F+ M        +  ++V G  A 
Sbjct: 203 DALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAA 262

Query: 33  GRVDD 19
            ++ D
Sbjct: 263 AKILD 267


>ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  205 bits (522), Expect = 4e-51
 Identities = 104/193 (53%), Positives = 134/193 (69%), Gaps = 12/193 (6%)
 Frame = -3

Query: 546 TTPFSTAEGVTTRIRNPKSSPFKTKPHNNSPSLLSQ------------FHHHLKNQRVDE 403
           TTPF+T   +   IRN ++  F T  ++++ +  S               HHL N+ +DE
Sbjct: 14  TTPFTTGPQILVGIRNSRTFSFNTATNDSTSTSTSTNSFNIIKSHKYLLFHHLNNRSLDE 73

Query: 402 ARAVLNQIPSPHVSLYTKTLLAYAYNHRLHDAIKLFHQIPPNSRDPISWNSLIKACIQNG 223
           ARA+ +QIP+PHVSLYT  L AYA NHRL +AI LF +IP   +D +SWNS+IK C+  G
Sbjct: 74  ARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIP--FKDVVSWNSIIKGCLHCG 131

Query: 222 DLKTALKLFDQMPHRTNVSWTTLVNAFLNLGRVEDAETLFRTMPPHDRDVAAWNSMVNGY 43
           D+ TA KLFD+MP RT VSWTTLV+  L LG V++AETLF  M P DRDVAAWN+M++GY
Sbjct: 132 DIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWNAMIHGY 191

Query: 42  CANGRVDDALRLF 4
           C+NGRVDDAL+LF
Sbjct: 192 CSNGRVDDALQLF 204



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/103 (32%), Positives = 54/103 (52%)
 Frame = -3

Query: 402 ARAVLNQIPSPHVSLYTKTLLAYAYNHRLHDAIKLFHQIPPNSRDPISWNSLIKACIQNG 223
           AR + +++P   V  +T  +        + +A  LF  + P  RD  +WN++I     NG
Sbjct: 136 ARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAWNAMIHGYCSNG 195

Query: 222 DLKTALKLFDQMPHRTNVSWTTLVNAFLNLGRVEDAETLFRTM 94
            +  AL+LF QMP R  +SW++++    + G+ E A  LFR M
Sbjct: 196 RVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDM 238


>ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g46460, mitochondrial; Flags: Precursor
           gi|10177583|dbj|BAB10814.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008005|gb|AED95388.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 697

 Score =  165 bits (417), Expect = 7e-39
 Identities = 79/144 (54%), Positives = 106/144 (73%)
 Frame = -3

Query: 432 HHLKNQRVDEARAVLNQIPSPHVSLYTKTLLAYAYNHRLHDAIKLFHQIPPNSRDPISWN 253
           +HL ++R+DEAR V NQ+PSPHVSLYTK +  Y  ++RL DA+ LF ++P   RD +SWN
Sbjct: 44  NHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPV--RDVVSWN 101

Query: 252 SLIKACIQNGDLKTALKLFDQMPHRTNVSWTTLVNAFLNLGRVEDAETLFRTMPPHDRDV 73
           S+I  C++ GD+ TA+KLFD+MP R+ VSWT +VN     G+V+ AE LF  MP   +D 
Sbjct: 102 SMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPV--KDT 159

Query: 72  AAWNSMVNGYCANGRVDDALRLFR 1
           AAWNSMV+GY   G+VDDAL+LF+
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFK 183


>ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  162 bits (410), Expect = 4e-38
 Identities = 79/151 (52%), Positives = 104/151 (68%)
 Frame = -3

Query: 453 SLLSQFHHHLKNQRVDEARAVLNQIPSPHVSLYTKTLLAYAYNHRLHDAIKLFHQIPPNS 274
           S  S    HL+NQR+DEAR V +++  P V LYT  +  YA N+R   A++LF+++P   
Sbjct: 13  SYQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV-- 70

Query: 273 RDPISWNSLIKACIQNGDLKTALKLFDQMPHRTNVSWTTLVNAFLNLGRVEDAETLFRTM 94
           +D +SWNS+IK C    DL  A KLFD+MP R+ VSWTT++N FL  G++E AE LF  M
Sbjct: 71  KDVVSWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKM 130

Query: 93  PPHDRDVAAWNSMVNGYCANGRVDDALRLFR 1
           P   RD+AAWNSM+ GYC NGRV+D LRLF+
Sbjct: 131 P--FRDIAAWNSMIYGYCCNGRVEDGLRLFQ 159


>ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311026|gb|EFH41450.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 697

 Score =  162 bits (409), Expect = 6e-38
 Identities = 77/144 (53%), Positives = 106/144 (73%)
 Frame = -3

Query: 432 HHLKNQRVDEARAVLNQIPSPHVSLYTKTLLAYAYNHRLHDAIKLFHQIPPNSRDPISWN 253
           +HL N+R+DEAR V +Q+PSPHVSLYTK +  Y  ++RL DA+ LF ++P   RD +SWN
Sbjct: 44  NHLLNRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMP--LRDVVSWN 101

Query: 252 SLIKACIQNGDLKTALKLFDQMPHRTNVSWTTLVNAFLNLGRVEDAETLFRTMPPHDRDV 73
           S+I  C++ GD+ TA+K+FD+MP R+ VSWT +VN     G V+ AE LF  MP   +D+
Sbjct: 102 SMISGCVECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPV--KDI 159

Query: 72  AAWNSMVNGYCANGRVDDALRLFR 1
           AAWN+MV+GY   G+VDDAL+LF+
Sbjct: 160 AAWNAMVHGYLQFGKVDDALKLFK 183