BLASTX nr result

ID: Glycyrrhiza23_contig00026078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026078
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601903.1| RING-H2 finger protein [Medicago truncatula]...   157   9e-37
ref|XP_003551995.1| PREDICTED: E3 ubiquitin-protein ligase RNF18...   150   1e-34
ref|NP_001238215.1| uncharacterized protein LOC100527069 [Glycin...   149   3e-34
ref|XP_002530038.1| protein binding protein, putative [Ricinus c...   132   3e-29
ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29

>ref|XP_003601903.1| RING-H2 finger protein [Medicago truncatula]
           gi|355490951|gb|AES72154.1| RING-H2 finger protein
           [Medicago truncatula]
          Length = 151

 Score =  157 bits (397), Expect = 9e-37
 Identities = 87/139 (62%), Positives = 103/139 (74%), Gaps = 17/139 (12%)
 Frame = -3

Query: 366 MGLSNFPCAAEGVLPMIVMNTVLSVALLKNMFRSMLQVVGGINPSNN------IESQEES 205
           MGLSNFP AAEGV+P+IVMNTVLS+ LLKNMFRSMLQVVG  + +N+      +E  EE 
Sbjct: 1   MGLSNFPYAAEGVVPVIVMNTVLSMVLLKNMFRSMLQVVGCTSTTNSSYSPNIMEELEEE 60

Query: 204 FHHDDEMNSSNKSRERRVSISQYKSLLCHNNNN-----------SILVECCVCLSGYEAN 58
             +  E+++S   RERRVSI+QYK  LC+N +N           S +VECCVCLSG+EAN
Sbjct: 61  QVYSQEISNS---RERRVSITQYK-FLCYNRSNIARSSSSCGWTSPMVECCVCLSGFEAN 116

Query: 57  QEVSELPCKHFFHRGCLDK 1
           QEVSELPCKHFFHRGCLDK
Sbjct: 117 QEVSELPCKHFFHRGCLDK 135


>ref|XP_003551995.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Glycine max]
          Length = 134

 Score =  150 bits (378), Expect = 1e-34
 Identities = 82/126 (65%), Positives = 100/126 (79%), Gaps = 4/126 (3%)
 Frame = -3

Query: 366 MGLSNFPCAAEGVLPMIVMNTVLSVALLKNMFRSMLQVVGGINPSNNIESQEESFHHDDE 187
           MGLSNFP A+EGVLP++V+NTVLSVA+LKNMFRSMLQVV G + + N  + E    HD+ 
Sbjct: 1   MGLSNFPSASEGVLPVLVINTVLSVAVLKNMFRSMLQVVLGGSAAANGSNIE----HDE- 55

Query: 186 MNSSNKSRERRVSISQYKSLLCHNNN----NSILVECCVCLSGYEANQEVSELPCKHFFH 19
             SS+ S ERRVSI+QYKSL CH+++    +  +VECCVCL  +EANQEVSELPCKH+FH
Sbjct: 56  --SSSSSWERRVSITQYKSL-CHSHDIGGTSMAMVECCVCLCRFEANQEVSELPCKHYFH 112

Query: 18  RGCLDK 1
           RGCLDK
Sbjct: 113 RGCLDK 118


>ref|NP_001238215.1| uncharacterized protein LOC100527069 [Glycine max]
           gi|255631484|gb|ACU16109.1| unknown [Glycine max]
          Length = 141

 Score =  149 bits (376), Expect = 3e-34
 Identities = 80/128 (62%), Positives = 98/128 (76%), Gaps = 6/128 (4%)
 Frame = -3

Query: 366 MGLSNFPCAA-EGVLPMIVMNTVLSVALLKNMFRSMLQVVGGINPSNNIESQEESFHHDD 190
           MGLSNFP +A E VLP++V+NTV SVALLK+MFRS LQVV G     +  S   +  HDD
Sbjct: 1   MGLSNFPISASERVLPVLVINTVFSVALLKSMFRSTLQVVFG----GSAASSSSNIEHDD 56

Query: 189 EMNSSNKSRERRVSISQYKSLLCHNNN-----NSILVECCVCLSGYEANQEVSELPCKHF 25
           E++SS+ SRERRVSI+QYKSL CH+++     +  +VECCVCL  +E NQEVSELPCKH+
Sbjct: 57  EISSSSSSRERRVSITQYKSL-CHSHDIGGGTSVAMVECCVCLCRFEDNQEVSELPCKHY 115

Query: 24  FHRGCLDK 1
           FHRGCLDK
Sbjct: 116 FHRGCLDK 123


>ref|XP_002530038.1| protein binding protein, putative [Ricinus communis]
           gi|223530454|gb|EEF32338.1| protein binding protein,
           putative [Ricinus communis]
          Length = 139

 Score =  132 bits (332), Expect = 3e-29
 Identities = 71/128 (55%), Positives = 89/128 (69%), Gaps = 6/128 (4%)
 Frame = -3

Query: 366 MGLSNFPCAAEGVLPMIVMNTVLSVALLKNMFRSMLQVVGGIN---PSNNIESQEESFHH 196
           MGLS+FP AAEGVLP++VMNTVLSVAL KN  R++LQVV G N   P    E        
Sbjct: 1   MGLSSFPSAAEGVLPVLVMNTVLSVALFKNWVRALLQVVMGANYWVPQYYYEQDRP---- 56

Query: 195 DDEMNSSNKSRERRVSISQYKSL---LCHNNNNSILVECCVCLSGYEANQEVSELPCKHF 25
            D  +  N  RERR+SI+Q+KS+   +  + ++S  VECCVCL G+E ++EVSEL CKHF
Sbjct: 57  -DVFSQDNARRERRISITQFKSMGAAIGTSRSSSSTVECCVCLCGFEEDEEVSELSCKHF 115

Query: 24  FHRGCLDK 1
           FH+GCLDK
Sbjct: 116 FHKGCLDK 123


>ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|222863634|gb|EEF00765.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  132 bits (332), Expect = 3e-29
 Identities = 73/123 (59%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
 Frame = -3

Query: 366 MGLSNFPCAAEGVLPMIVMNTVLSVALLKNMFRSMLQVVGGINPSNNIESQEESFHHDDE 187
           MGLS+FP AAEGVLP++VMNTVLSVALLK+M RS+LQ+V G N +     +E      DE
Sbjct: 1   MGLSSFPGAAEGVLPVLVMNTVLSVALLKSMVRSVLQLVVGANWTPPDYEEEP-----DE 55

Query: 186 MNSSNKSRERRVSISQYKSLLCHNNN-NSILVECCVCLSGYEANQEVSELPCKHFFHRGC 10
               N +RERR+SI+Q+KSL  ++    +  +ECCVCL G+EA +EVSEL CKHFFHRGC
Sbjct: 56  YRREN-ARERRISITQFKSLNQNDGGARNSAMECCVCLCGFEAEEEVSELSCKHFFHRGC 114

Query: 9   LDK 1
           LDK
Sbjct: 115 LDK 117


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