BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026056
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...   251   6e-65
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   246   1e-63
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E sub...   246   2e-63
ref|XP_002299208.1| RNA polymerase IV subunit [Populus trichocar...   234   7e-60
ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocar...   231   6e-59

>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine
           max]
          Length = 2098

 Score =  251 bits (640), Expect = 6e-65
 Identities = 123/134 (91%), Positives = 128/134 (95%)
 Frame = +1

Query: 1   RRIMDGDIVFINRPPTTHKHSLQALVVYIHDDHTVKINPLICAPLGADFDGDCVHLFYPQ 180
           RRIMDGDIVFINRPPTTHKHSLQAL VYIH+DHTVKINPLIC PLGADFDGDCVHLFYPQ
Sbjct: 406 RRIMDGDIVFINRPPTTHKHSLQALYVYIHEDHTVKINPLICGPLGADFDGDCVHLFYPQ 465

Query: 181 SLAAKAEVVELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMLVKRCFLDRAAANQLGMFLS 360
           SLAAKAEVVELFSVE QLLSSHSGNLNLQL+TDSLLSLKMLVKRCF DRAAANQL MF+ 
Sbjct: 466 SLAAKAEVVELFSVENQLLSSHSGNLNLQLSTDSLLSLKMLVKRCFFDRAAANQLAMFIL 525

Query: 361 MPLPQPALLKASSG 402
           +PLP+PALLKASSG
Sbjct: 526 LPLPRPALLKASSG 539


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
           gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
           subunit [Medicago truncatula]
          Length = 2032

 Score =  246 bits (628), Expect = 1e-63
 Identities = 120/134 (89%), Positives = 126/134 (94%)
 Frame = +1

Query: 1   RRIMDGDIVFINRPPTTHKHSLQALVVYIHDDHTVKINPLICAPLGADFDGDCVHLFYPQ 180
           RRIMDGD VFINRPPTTHKHSLQALVVYIHDDHTVKINPLIC PLGADFDGDCVHLFYPQ
Sbjct: 488 RRIMDGDTVFINRPPTTHKHSLQALVVYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQ 547

Query: 181 SLAAKAEVVELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMLVKRCFLDRAAANQLGMFLS 360
           SLAAKAEV+ELFSVEKQLLSSHSGNLNLQL+ DSLLSLKMLVK CFLDR AANQ+ MFL 
Sbjct: 548 SLAAKAEVLELFSVEKQLLSSHSGNLNLQLSADSLLSLKMLVKSCFLDRVAANQMAMFLL 607

Query: 361 MPLPQPALLKASSG 402
           +PLP PALLKA++G
Sbjct: 608 LPLPMPALLKATTG 621


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine
           max]
          Length = 2020

 Score =  246 bits (627), Expect = 2e-63
 Identities = 121/133 (90%), Positives = 127/133 (95%)
 Frame = +1

Query: 1   RRIMDGDIVFINRPPTTHKHSLQALVVYIHDDHTVKINPLICAPLGADFDGDCVHLFYPQ 180
           RRIMDGDIVFINRPPTTHKHSLQAL VYIH+DHTVKINPLIC PLGADFDGDCVHLFYPQ
Sbjct: 406 RRIMDGDIVFINRPPTTHKHSLQALYVYIHEDHTVKINPLICGPLGADFDGDCVHLFYPQ 465

Query: 181 SLAAKAEVVELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMLVKRCFLDRAAANQLGMFLS 360
           SLAAKAEVVELF+VE QLLSSHSGNLNLQL+TDSLL+LKMLVKRCFL RAAANQL MFL 
Sbjct: 466 SLAAKAEVVELFAVENQLLSSHSGNLNLQLSTDSLLALKMLVKRCFLGRAAANQLAMFLL 525

Query: 361 MPLPQPALLKASS 399
           +PLP+PALLKASS
Sbjct: 526 LPLPRPALLKASS 538


>ref|XP_002299208.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222846466|gb|EEE84013.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 842

 Score =  234 bits (596), Expect = 7e-60
 Identities = 113/132 (85%), Positives = 122/132 (92%)
 Frame = +1

Query: 1   RRIMDGDIVFINRPPTTHKHSLQALVVYIHDDHTVKINPLICAPLGADFDGDCVHLFYPQ 180
           RRI+DGD+VFINRPPTTHKHSLQAL VY+HDDHTVKINPLIC PL ADFDGDCVHLFYPQ
Sbjct: 322 RRIIDGDVVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQ 381

Query: 181 SLAAKAEVVELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMLVKRCFLDRAAANQLGMFLS 360
           SLAAKAEV+ELFSVEKQLLSSHSGNLNLQLTTDSLLSLKM+ K CFLD++AA QL MF+S
Sbjct: 382 SLAAKAEVLELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMIFKACFLDKSAAQQLAMFVS 441

Query: 361 MPLPQPALLKAS 396
             LPQPALLK +
Sbjct: 442 PDLPQPALLKVN 453


>ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222841357|gb|EEE78904.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 924

 Score =  231 bits (588), Expect = 6e-59
 Identities = 113/132 (85%), Positives = 120/132 (90%)
 Frame = +1

Query: 1   RRIMDGDIVFINRPPTTHKHSLQALVVYIHDDHTVKINPLICAPLGADFDGDCVHLFYPQ 180
           RRIMDGDIVFINRPPTTHKHSLQAL VY+HDDH VKINPLIC PL ADFDGDCVHLFYPQ
Sbjct: 404 RRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHAVKINPLICGPLSADFDGDCVHLFYPQ 463

Query: 181 SLAAKAEVVELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMLVKRCFLDRAAANQLGMFLS 360
           SLAAKAEV+ELFSVEKQLLSSHSGNLNLQLTTDSLLSLKM+ K CFL ++AA QL MF+S
Sbjct: 464 SLAAKAEVLELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMMFKACFLGKSAAQQLAMFIS 523

Query: 361 MPLPQPALLKAS 396
             LPQPALLK +
Sbjct: 524 PYLPQPALLKVN 535