BLASTX nr result
ID: Glycyrrhiza23_contig00026046
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00026046 (404 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containi... 241 6e-62 ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containi... 235 2e-60 ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi... 204 6e-51 emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera] 203 1e-50 ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|2... 193 1e-47 >ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390, chloroplastic-like [Glycine max] Length = 691 Score = 241 bits (614), Expect = 6e-62 Identities = 113/130 (86%), Positives = 122/130 (93%) Frame = +1 Query: 1 GMEPEKLCNYVVLLNIYNSSGKLKEAAGVLQTLKKKGLRMLPACSWIEVKKQPYSFLCGD 180 GMEPEKLCNY+VLLN+YNSSGKLKEAAG+LQTLKKKGLRMLPACSW+EVKKQPY+FLCGD Sbjct: 517 GMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGD 576 Query: 181 KSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLPDVDEEEQRIQKYHSEKLAIAFGLINT 360 KSH QT+EIYQKVDNL+VEI +HGY ENE LLPDVDEEEQRI KYHSEKLAIAFGLINT Sbjct: 577 KSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEEQRILKYHSEKLAIAFGLINT 636 Query: 361 PDWMPLQMTQ 390 P W PLQ+TQ Sbjct: 637 PHWTPLQITQ 646 >ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390, chloroplastic-like [Glycine max] Length = 690 Score = 235 bits (600), Expect = 2e-60 Identities = 111/130 (85%), Positives = 123/130 (94%) Frame = +1 Query: 1 GMEPEKLCNYVVLLNIYNSSGKLKEAAGVLQTLKKKGLRMLPACSWIEVKKQPYSFLCGD 180 GMEPEKLCNY+VLLN+YNSSGKLKEAAGVLQTLK+KGLRMLPAC+WIEVKKQ Y+FLCGD Sbjct: 516 GMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGD 575 Query: 181 KSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLPDVDEEEQRIQKYHSEKLAIAFGLINT 360 KSH QT+EIY+KV+N++VEISRHGYV EN+ LLPDVDEEEQRI KYHSEKLAIAFGLINT Sbjct: 576 KSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEEEQRILKYHSEKLAIAFGLINT 635 Query: 361 PDWMPLQMTQ 390 P W PLQ+TQ Sbjct: 636 PHWTPLQITQ 645 >ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Vitis vinifera] Length = 704 Score = 204 bits (519), Expect = 6e-51 Identities = 94/130 (72%), Positives = 114/130 (87%) Frame = +1 Query: 1 GMEPEKLCNYVVLLNIYNSSGKLKEAAGVLQTLKKKGLRMLPACSWIEVKKQPYSFLCGD 180 GM PEKL NYVVLLNIYN SG+L+EAA V+QTLK++GLRMLPACSWIE+KKQPY F+ GD Sbjct: 530 GMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGD 589 Query: 181 KSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLPDVDEEEQRIQKYHSEKLAIAFGLINT 360 K H Q++EIYQK+D L++EIS+HGYV +++ LLPDVDE+E+R+ YHSEKLAIAFGLINT Sbjct: 590 KCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQEERVLLYHSEKLAIAFGLINT 649 Query: 361 PDWMPLQMTQ 390 DW PLQ+ Q Sbjct: 650 SDWTPLQIVQ 659 >emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera] Length = 704 Score = 203 bits (517), Expect = 1e-50 Identities = 94/130 (72%), Positives = 113/130 (86%) Frame = +1 Query: 1 GMEPEKLCNYVVLLNIYNSSGKLKEAAGVLQTLKKKGLRMLPACSWIEVKKQPYSFLCGD 180 GM PEKL NYVVLLNIYN SG+L+EAA V+QTLK++GLRMLPACSWIE+KKQPY F+ GD Sbjct: 530 GMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGD 589 Query: 181 KSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLPDVDEEEQRIQKYHSEKLAIAFGLINT 360 K H Q++EIYQK+D L++EIS+HGYV + + LLPDVDE+E+R+ YHSEKLAIAFGLINT Sbjct: 590 KCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQEERVLLYHSEKLAIAFGLINT 649 Query: 361 PDWMPLQMTQ 390 DW PLQ+ Q Sbjct: 650 SDWTPLQIVQ 659 >ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa] Length = 548 Score = 193 bits (490), Expect = 1e-47 Identities = 90/130 (69%), Positives = 110/130 (84%) Frame = +1 Query: 1 GMEPEKLCNYVVLLNIYNSSGKLKEAAGVLQTLKKKGLRMLPACSWIEVKKQPYSFLCGD 180 GMEP+KL NY+VLLNIYNS+G LKEAA V+ TLK+KGLRM P CSWIEVK++P+ FL GD Sbjct: 374 GMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGD 433 Query: 181 KSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLPDVDEEEQRIQKYHSEKLAIAFGLINT 360 HPQ +EIYQKVD L++EIS++GYV + LLPDVDE+E+R++ YHSEKLAIAFGLI+T Sbjct: 434 NRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRLYHSEKLAIAFGLIST 493 Query: 361 PDWMPLQMTQ 390 P W PLQ+ Q Sbjct: 494 PYWAPLQIVQ 503