BLASTX nr result

ID: Glycyrrhiza23_contig00026046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026046
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containi...   241   6e-62
ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containi...   235   2e-60
ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi...   204   6e-51
emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]   203   1e-50
ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47

>ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  241 bits (614), Expect = 6e-62
 Identities = 113/130 (86%), Positives = 122/130 (93%)
 Frame = +1

Query: 1   GMEPEKLCNYVVLLNIYNSSGKLKEAAGVLQTLKKKGLRMLPACSWIEVKKQPYSFLCGD 180
           GMEPEKLCNY+VLLN+YNSSGKLKEAAG+LQTLKKKGLRMLPACSW+EVKKQPY+FLCGD
Sbjct: 517 GMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGD 576

Query: 181 KSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLPDVDEEEQRIQKYHSEKLAIAFGLINT 360
           KSH QT+EIYQKVDNL+VEI +HGY  ENE LLPDVDEEEQRI KYHSEKLAIAFGLINT
Sbjct: 577 KSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEEQRILKYHSEKLAIAFGLINT 636

Query: 361 PDWMPLQMTQ 390
           P W PLQ+TQ
Sbjct: 637 PHWTPLQITQ 646


>ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  235 bits (600), Expect = 2e-60
 Identities = 111/130 (85%), Positives = 123/130 (94%)
 Frame = +1

Query: 1   GMEPEKLCNYVVLLNIYNSSGKLKEAAGVLQTLKKKGLRMLPACSWIEVKKQPYSFLCGD 180
           GMEPEKLCNY+VLLN+YNSSGKLKEAAGVLQTLK+KGLRMLPAC+WIEVKKQ Y+FLCGD
Sbjct: 516 GMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGD 575

Query: 181 KSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLPDVDEEEQRIQKYHSEKLAIAFGLINT 360
           KSH QT+EIY+KV+N++VEISRHGYV EN+ LLPDVDEEEQRI KYHSEKLAIAFGLINT
Sbjct: 576 KSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEEEQRILKYHSEKLAIAFGLINT 635

Query: 361 PDWMPLQMTQ 390
           P W PLQ+TQ
Sbjct: 636 PHWTPLQITQ 645


>ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  204 bits (519), Expect = 6e-51
 Identities = 94/130 (72%), Positives = 114/130 (87%)
 Frame = +1

Query: 1   GMEPEKLCNYVVLLNIYNSSGKLKEAAGVLQTLKKKGLRMLPACSWIEVKKQPYSFLCGD 180
           GM PEKL NYVVLLNIYN SG+L+EAA V+QTLK++GLRMLPACSWIE+KKQPY F+ GD
Sbjct: 530 GMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGD 589

Query: 181 KSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLPDVDEEEQRIQKYHSEKLAIAFGLINT 360
           K H Q++EIYQK+D L++EIS+HGYV +++ LLPDVDE+E+R+  YHSEKLAIAFGLINT
Sbjct: 590 KCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQEERVLLYHSEKLAIAFGLINT 649

Query: 361 PDWMPLQMTQ 390
            DW PLQ+ Q
Sbjct: 650 SDWTPLQIVQ 659


>emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  203 bits (517), Expect = 1e-50
 Identities = 94/130 (72%), Positives = 113/130 (86%)
 Frame = +1

Query: 1   GMEPEKLCNYVVLLNIYNSSGKLKEAAGVLQTLKKKGLRMLPACSWIEVKKQPYSFLCGD 180
           GM PEKL NYVVLLNIYN SG+L+EAA V+QTLK++GLRMLPACSWIE+KKQPY F+ GD
Sbjct: 530 GMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGD 589

Query: 181 KSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLPDVDEEEQRIQKYHSEKLAIAFGLINT 360
           K H Q++EIYQK+D L++EIS+HGYV + + LLPDVDE+E+R+  YHSEKLAIAFGLINT
Sbjct: 590 KCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQEERVLLYHSEKLAIAFGLINT 649

Query: 361 PDWMPLQMTQ 390
            DW PLQ+ Q
Sbjct: 650 SDWTPLQIVQ 659


>ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|222869246|gb|EEF06377.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  193 bits (490), Expect = 1e-47
 Identities = 90/130 (69%), Positives = 110/130 (84%)
 Frame = +1

Query: 1   GMEPEKLCNYVVLLNIYNSSGKLKEAAGVLQTLKKKGLRMLPACSWIEVKKQPYSFLCGD 180
           GMEP+KL NY+VLLNIYNS+G LKEAA V+ TLK+KGLRM P CSWIEVK++P+ FL GD
Sbjct: 374 GMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFLSGD 433

Query: 181 KSHPQTEEIYQKVDNLIVEISRHGYVVENEMLLPDVDEEEQRIQKYHSEKLAIAFGLINT 360
             HPQ +EIYQKVD L++EIS++GYV   + LLPDVDE+E+R++ YHSEKLAIAFGLI+T
Sbjct: 434 NRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVRLYHSEKLAIAFGLIST 493

Query: 361 PDWMPLQMTQ 390
           P W PLQ+ Q
Sbjct: 494 PYWAPLQIVQ 503


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