BLASTX nr result

ID: Glycyrrhiza23_contig00026041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026041
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636449.1| U-box domain-containing protein [Medicago tr...   131   6e-29
ref|XP_003636401.1| U-box domain-containing protein [Medicago tr...   131   6e-29
ref|XP_003527831.1| PREDICTED: uncharacterized protein LOC100814...   104   6e-21
ref|XP_003523734.1| PREDICTED: U-box domain-containing protein 2...   101   7e-20
ref|XP_002308611.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14

>ref|XP_003636449.1| U-box domain-containing protein [Medicago truncatula]
           gi|355502384|gb|AES83587.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 288

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/73 (86%), Positives = 67/73 (91%)
 Frame = -1

Query: 464 GKTGARGREYAIGVLAVVYGGDEADQQTAPPEEVARAVELALQGECSARGKRKGAQLLKT 285
           GKTGARG+EYAIGVLAV+YGGD  D QTAPPEEVARAVELALQG+CSARGKRKGAQLLKT
Sbjct: 216 GKTGARGKEYAIGVLAVIYGGDMGDMQTAPPEEVARAVELALQGDCSARGKRKGAQLLKT 275

Query: 284 LQHLSQPQPHDTT 246
           LQHLS P  HDT+
Sbjct: 276 LQHLSHPHSHDTS 288


>ref|XP_003636401.1| U-box domain-containing protein [Medicago truncatula]
           gi|355502336|gb|AES83539.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 289

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/73 (86%), Positives = 67/73 (91%)
 Frame = -1

Query: 464 GKTGARGREYAIGVLAVVYGGDEADQQTAPPEEVARAVELALQGECSARGKRKGAQLLKT 285
           GKTGARG+EYAIGVLAV+YGGD  D QTAPPEEVARAVELALQG+CSARGKRKGAQLLKT
Sbjct: 217 GKTGARGKEYAIGVLAVIYGGDMGDMQTAPPEEVARAVELALQGDCSARGKRKGAQLLKT 276

Query: 284 LQHLSQPQPHDTT 246
           LQHLS P  HDT+
Sbjct: 277 LQHLSHPHSHDTS 289


>ref|XP_003527831.1| PREDICTED: uncharacterized protein LOC100814020 [Glycine max]
          Length = 307

 Score =  104 bits (260), Expect = 6e-21
 Identities = 55/69 (79%), Positives = 59/69 (85%), Gaps = 2/69 (2%)
 Frame = -1

Query: 461 KTGARGREYAIGVLAVVYG--GDEADQQTAPPEEVARAVELALQGECSARGKRKGAQLLK 288
           KT ARG+EYAIGVLAVVYG  G   +  TAPPEEVARAVELALQGECSARG+RKGAQLLK
Sbjct: 227 KTAARGKEYAIGVLAVVYGSVGGGEEHHTAPPEEVARAVELALQGECSARGRRKGAQLLK 286

Query: 287 TLQHLSQPQ 261
           TLQ LSQ +
Sbjct: 287 TLQQLSQAE 295


>ref|XP_003523734.1| PREDICTED: U-box domain-containing protein 26-like [Glycine max]
          Length = 287

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/68 (77%), Positives = 57/68 (83%), Gaps = 1/68 (1%)
 Frame = -1

Query: 461 KTGARGREYAIGVLAVVYGGDEADQQ-TAPPEEVARAVELALQGECSARGKRKGAQLLKT 285
           KT ARG+EYAIG LAVVYG   A+   TAPPEEVARAVELALQGECSARG+RKG QLLKT
Sbjct: 208 KTAARGKEYAIGALAVVYGAAGAENHYTAPPEEVARAVELALQGECSARGRRKGTQLLKT 267

Query: 284 LQHLSQPQ 261
           LQ LSQ +
Sbjct: 268 LQQLSQAE 275


>ref|XP_002308611.1| predicted protein [Populus trichocarpa] gi|222854587|gb|EEE92134.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/67 (65%), Positives = 51/67 (76%), Gaps = 5/67 (7%)
 Frame = -1

Query: 464 GKTGARGREYAIGVLAVVYG----GDEADQQT-APPEEVARAVELALQGECSARGKRKGA 300
           GK   RG+EYAI  LAV+YG    G + +Q   APPEEVARAV LALQG+C+ARG+RKGA
Sbjct: 140 GKMAGRGKEYAISALAVIYGSGGVGSDGEQTLHAPPEEVARAVALALQGDCTARGRRKGA 199

Query: 299 QLLKTLQ 279
           QLLK LQ
Sbjct: 200 QLLKALQ 206


Top