BLASTX nr result

ID: Glycyrrhiza23_contig00026027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026027
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like ...   217   1e-54
ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like ...   217   1e-54
ref|XP_003627467.1| RING-H2 finger protein ATL3C [Medicago trunc...   202   3e-50
emb|CBI35789.3| unnamed protein product [Vitis vinifera]              178   5e-43
ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like...   177   1e-42

>ref|XP_003548383.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 319

 Score =  217 bits (553), Expect = 1e-54
 Identities = 107/150 (71%), Positives = 114/150 (76%)
 Frame = +3

Query: 42  FVFAPGQDPVTYGTHQIGLDPSVLRSLPVLVFQPEEFKDALECAVCLSEIAQGEKARLLP 221
           FVFAPGQDPV Y THQ+GLDPSVL+SL VLVFQPEEFK+ LECAVCLSEI +GEK RLLP
Sbjct: 66  FVFAPGQDPVIYETHQVGLDPSVLKSLAVLVFQPEEFKEGLECAVCLSEIVEGEKLRLLP 125

Query: 222 KCNHGFHVDCIDMWFQSHSTCPLCRNPVAVASDSSKVATSGXXXXXXXXXXXXXXXXXMS 401
           KCNHGFHVDCIDMWF SHSTCPLCRNPV   S   +   +                   S
Sbjct: 126 KCNHGFHVDCIDMWFHSHSTCPLCRNPVTFESSKIEENNNVLGSSEDSSSSHEENSGGGS 185

Query: 402 GLEPSNFPTNVLVWGNQTQVSSFGVVSLEE 491
           GLEPSNFPTNVLVWGNQTQVSSFG VSLE+
Sbjct: 186 GLEPSNFPTNVLVWGNQTQVSSFG-VSLED 214


>ref|XP_003529860.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 314

 Score =  217 bits (553), Expect = 1e-54
 Identities = 111/151 (73%), Positives = 117/151 (77%), Gaps = 1/151 (0%)
 Frame = +3

Query: 42  FVFAPGQDPVTYGTHQIGLDPSVLRSLPVLVFQPEEFKDALECAVCLSEIAQGEKARLLP 221
           FVFAPGQD V Y THQ+GLDPSVL+SLPVLVFQPE+FK+ LECAVCLSEI QGEK RLLP
Sbjct: 67  FVFAPGQDSVIYETHQVGLDPSVLKSLPVLVFQPEDFKEGLECAVCLSEIVQGEKLRLLP 126

Query: 222 KCNHGFHVDCIDMWFQSHSTCPLCRNPVAVASDSSKVATSG-XXXXXXXXXXXXXXXXXM 398
           KCNHGFHVDCIDMWF SHSTCPLCRNPVA   +SSK   S                   +
Sbjct: 127 KCNHGFHVDCIDMWFHSHSTCPLCRNPVAF--ESSKCEESNVSGNSDSSSSSYEENSGGV 184

Query: 399 SGLEPSNFPTNVLVWGNQTQVSSFGVVSLEE 491
           SGLEPSNFPTNVLVWGNQTQVSS G VSLEE
Sbjct: 185 SGLEPSNFPTNVLVWGNQTQVSSIG-VSLEE 214


>ref|XP_003627467.1| RING-H2 finger protein ATL3C [Medicago truncatula]
           gi|355521489|gb|AET01943.1| RING-H2 finger protein ATL3C
           [Medicago truncatula]
          Length = 321

 Score =  202 bits (514), Expect = 3e-50
 Identities = 99/152 (65%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +3

Query: 42  FVFAPGQDPVTYGTHQIGLDPSVLRSLPVLVFQPEEFKDALECAVCLSEIAQGEKARLLP 221
           FVFAPGQDPV YG+HQIGL+  +L+SLPVLVF+ E+FKD LECAVCL ++ +GEK RLLP
Sbjct: 75  FVFAPGQDPVVYGSHQIGLEAKILKSLPVLVFKNEDFKDGLECAVCLCDVVEGEKTRLLP 134

Query: 222 KCNHGFHVDCIDMWFQSHSTCPLCRNPVAVASDSSKVATSGXXXXXXXXXXXXXXXXXMS 401
           KCNHGFH+DCIDMWFQSHSTCPLCRN V+V S      TS                  ++
Sbjct: 135 KCNHGFHLDCIDMWFQSHSTCPLCRNLVSVESCKPNSTTSNGEEMNVLVSSEGENLSHVN 194

Query: 402 GLEPSNFPTNVLVWGN-QTQVSSFGVVSLEEG 494
           GLE SNFPTNVLVWGN Q QVSS   VSLEEG
Sbjct: 195 GLESSNFPTNVLVWGNSQRQVSSSFGVSLEEG 226


>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  178 bits (452), Expect = 5e-43
 Identities = 91/151 (60%), Positives = 105/151 (69%)
 Frame = +3

Query: 42  FVFAPGQDPVTYGTHQIGLDPSVLRSLPVLVFQPEEFKDALECAVCLSEIAQGEKARLLP 221
           FVFAPGQDP      + GLDPS+L S+PVLVF+PEEFKD LECAVCLSE+  GEKARLLP
Sbjct: 81  FVFAPGQDPALPAMRR-GLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGEKARLLP 139

Query: 222 KCNHGFHVDCIDMWFQSHSTCPLCRNPVAVASDSSKVATSGXXXXXXXXXXXXXXXXXMS 401
           KCNHGFHV+CIDMWFQSHSTCPLCRN VA +S +   +                      
Sbjct: 140 KCNHGFHVECIDMWFQSHSTCPLCRNLVATSSAAGDYS---------------------- 177

Query: 402 GLEPSNFPTNVLVWGNQTQVSSFGVVSLEEG 494
            LE  N+PTN+L WGNQT+V+S G + LEEG
Sbjct: 178 -LESPNYPTNILFWGNQTRVTSAG-LCLEEG 206


>ref|XP_002263215.1| PREDICTED: RING-H2 finger protein ATL60-like [Vitis vinifera]
          Length = 304

 Score =  177 bits (449), Expect = 1e-42
 Identities = 91/151 (60%), Positives = 102/151 (67%)
 Frame = +3

Query: 42  FVFAPGQDPVTYGTHQIGLDPSVLRSLPVLVFQPEEFKDALECAVCLSEIAQGEKARLLP 221
           FVFAPGQDP      + GLDPS+L S+PVLVF+PEEFKD LECAVCLSE+  GEKARLLP
Sbjct: 68  FVFAPGQDPALPAMRR-GLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGEKARLLP 126

Query: 222 KCNHGFHVDCIDMWFQSHSTCPLCRNPVAVASDSSKVATSGXXXXXXXXXXXXXXXXXMS 401
           KCNHGFHV+CIDMWFQSHSTCPLCRN VA          S                    
Sbjct: 127 KCNHGFHVECIDMWFQSHSTCPLCRNLVATVLSDPTTPQSPESIQLSDESSAAGDY---- 182

Query: 402 GLEPSNFPTNVLVWGNQTQVSSFGVVSLEEG 494
            LE  N+PTN+L WGNQT+V+S G + LEEG
Sbjct: 183 SLESPNYPTNILFWGNQTRVTSAG-LCLEEG 212


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