BLASTX nr result

ID: Glycyrrhiza23_contig00026026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026026
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22
ref|XP_003607688.1| Pentatricopeptide repeat-containing protein ...    99   3e-19
ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15
ref|XP_002317568.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15

>ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Glycine max]
          Length = 1117

 Score =  108 bits (270), Expect = 4e-22
 Identities = 48/75 (64%), Positives = 62/75 (82%)
 Frame = -3

Query: 232 ISNGEILHKRKEVSRGRKGKWIFKCTGDDQFDRLLKKCVERLGTSATVEVFGHLGRETGL 53
           +S+G++  KRK+V+R RK KWIFK T DD+FDRL+K C ++LG   TV VFG LGRETG+
Sbjct: 106 LSHGKLSEKRKDVARERKQKWIFKYTSDDRFDRLIKMCADKLGVGKTVNVFGQLGRETGV 165

Query: 52  KEFNTLIKLCIKKAR 8
           KE+NTLIK+C+KKAR
Sbjct: 166 KEYNTLIKMCVKKAR 180


>ref|XP_003607688.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508743|gb|AES89885.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1353

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/76 (63%), Positives = 60/76 (78%)
 Frame = -3

Query: 232 ISNGEILHKRKEVSRGRKGKWIFKCTGDDQFDRLLKKCVERLGTSATVEVFGHLGRETGL 53
           I + ++  KR E SR RK KWIFK TG ++ DRLLK C ++LGT+ TV+VFG+LGRETG+
Sbjct: 109 IHHCDLSKKRNESSRERKHKWIFKDTGGERSDRLLKICAKKLGTTTTVDVFGYLGRETGV 168

Query: 52  KEFNTLIKLCIKKARE 5
           KE+N LIKLCIKK RE
Sbjct: 169 KEYNGLIKLCIKKVRE 184


>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Vitis vinifera]
          Length = 848

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/75 (56%), Positives = 57/75 (76%)
 Frame = -3

Query: 232 ISNGEILHKRKEVSRGRKGKWIFKCTGDDQFDRLLKKCVERLGTSATVEVFGHLGRETGL 53
           +S+  I  +RKEVSR RK KW+FK T   + DRL+K C ++LGT AT++VFG LGRETG+
Sbjct: 111 LSHNNISLRRKEVSRERKQKWVFKNTQGGRLDRLVKTCAQKLGTEATIQVFGKLGRETGV 170

Query: 52  KEFNTLIKLCIKKAR 8
           KE+  L+ +CI+KAR
Sbjct: 171 KEYKALLGICIEKAR 185


>ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Cucumis sativus]
          Length = 1295

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/74 (50%), Positives = 53/74 (71%)
 Frame = -3

Query: 229 SNGEILHKRKEVSRGRKGKWIFKCTGDDQFDRLLKKCVERLGTSATVEVFGHLGRETGLK 50
           +N  +   RKE+SR RK  W+ K T  D+F RL++ C  RLG+  T+EVFG LGRETG+K
Sbjct: 184 TNHSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVK 243

Query: 49  EFNTLIKLCIKKAR 8
           E+N L+ +C++KA+
Sbjct: 244 EYNALVGICLEKAK 257


>ref|XP_002317568.1| predicted protein [Populus trichocarpa] gi|222860633|gb|EEE98180.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/68 (60%), Positives = 52/68 (76%)
 Frame = -3

Query: 208 KRKEVSRGRKGKWIFKCTGDDQFDRLLKKCVERLGTSATVEVFGHLGRETGLKEFNTLIK 29
           +RKE+S  RK KWIFK +    FDRL+  C  +LGT AT++VFG LGRETGLKEFN L+K
Sbjct: 141 QRKEISYERKQKWIFKNSQVYCFDRLVDTCAFKLGTDATMDVFGMLGRETGLKEFNALMK 200

Query: 28  LCIKKARE 5
           +CI++ RE
Sbjct: 201 MCIEQCRE 208


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