BLASTX nr result

ID: Glycyrrhiza23_contig00026024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026024
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535216.1| PREDICTED: chromosome transmission fidelity ...   239   3e-61
ref|XP_003556883.1| PREDICTED: chromosome transmission fidelity ...   237   2e-60
ref|XP_004134380.1| PREDICTED: chromosome transmission fidelity ...   105   1e-20
ref|NP_171966.2| chromosome transmission fidelity protein 18 [Ar...   102   1e-19
tpg|DAA44535.1| TPA: hypothetical protein ZEAMMB73_048051 [Zea m...   100   4e-19

>ref|XP_003535216.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
            [Glycine max]
          Length = 966

 Score =  239 bits (611), Expect = 3e-61
 Identities = 128/189 (67%), Positives = 144/189 (76%), Gaps = 1/189 (0%)
 Frame = -2

Query: 737  SLVPPISDYINFKDYTSNHYVLSLAMKQVLVHEVEKHKILQ-ANVKTEALANGGHEVVEA 561
            SLVPPISD+INFKDYTSNH VLS+AMKQVLVHEVEKHKILQ +N KT A  NGGHEV+E 
Sbjct: 778  SLVPPISDFINFKDYTSNHNVLSVAMKQVLVHEVEKHKILQVSNDKTGAFTNGGHEVIET 837

Query: 560  ATNNVPLANTNNHTAAADMKAMKNQANVLARQSNANPKTVSPNLNPTKSANATDNAKLLD 381
             TNN+PLANT NH  A DMK  +NQANVL++Q NANP  VSPNLN  KS+ A D  KLL+
Sbjct: 838  GTNNIPLANT-NHATAVDMKTNENQANVLSQQLNANPTAVSPNLNSDKSSIAADCGKLLN 896

Query: 380  MGXXXXXXXXXXXXXXXXXXXNVKGLQNDDRSLQNEATLEKDRCPLLFKFNEGFTNAVKR 201
            MG                   NVKGLQ++DRSL  EATL+KDR P+LFK+NEGFTNAVKR
Sbjct: 897  MGNVKKPSRTSSSFFDRFKKVNVKGLQSNDRSLPEEATLDKDRYPILFKYNEGFTNAVKR 956

Query: 200  PVRIREFLS 174
            PVR+REFLS
Sbjct: 957  PVRMREFLS 965


>ref|XP_003556883.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
            [Glycine max]
          Length = 959

 Score =  237 bits (605), Expect = 2e-60
 Identities = 128/189 (67%), Positives = 141/189 (74%), Gaps = 1/189 (0%)
 Frame = -2

Query: 737  SLVPPISDYINFKDYTSNHYVLSLAMKQVLVHEVEKHKILQ-ANVKTEALANGGHEVVEA 561
            SLVPPISD+INFKDYTSNHYVLS+AMKQVLVHEVEKHKILQ  N K  A  NGGHEV+E 
Sbjct: 772  SLVPPISDFINFKDYTSNHYVLSVAMKQVLVHEVEKHKILQVGNDKAGAFTNGGHEVIET 831

Query: 560  ATNNVPLANTNNHTAAADMKAMKNQANVLARQSNANPKTVSPNLNPTKSANATDNAKLLD 381
             TNN+PLANT +H  A D+K  +NQANVL+ Q NANP TVSPNL+  K + A D  KLL+
Sbjct: 832  GTNNIPLANT-SHATAVDLKINENQANVLSWQLNANPTTVSPNLDSNKISRAADCGKLLN 890

Query: 380  MGXXXXXXXXXXXXXXXXXXXNVKGLQNDDRSLQNEATLEKDRCPLLFKFNEGFTNAVKR 201
            MG                   N KGLQ++DRS Q EATLEKDR PLLFKFNEGFTNAVKR
Sbjct: 891  MGNMKKPSRSSSSFFDRFKKVNAKGLQSNDRSPQEEATLEKDRYPLLFKFNEGFTNAVKR 950

Query: 200  PVRIREFLS 174
            PVRIREFLS
Sbjct: 951  PVRIREFLS 959


>ref|XP_004134380.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
            [Cucumis sativus]
          Length = 972

 Score =  105 bits (261), Expect = 1e-20
 Identities = 74/198 (37%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
 Frame = -2

Query: 737  SLVPPISDYINFKDYTSNHYVLSLAMKQVLVHEVEKHKILQ-ANVKTEALANGGHEVVEA 561
            +L PPI  ++ FKDY S H VL+LA+KQ+LVHEVE  KILQ +N K E L++        
Sbjct: 789  ALDPPIDGFVCFKDYESCHNVLALAVKQLLVHEVENKKILQGSNGKLEPLSD-------- 840

Query: 560  ATNNVPLANTNNHTAAADMKAM----KNQANVLARQSNAN-PKTVSPNLNPTKSANATDN 396
                   A   NH    D  +     K +   L+ ++N    K+ S   +P+ S +A+D 
Sbjct: 841  -------AKQVNHEGTRDKSSKGGLTKTECVALSAKNNTEGQKSYSTQHHPSTSTSASDG 893

Query: 395  -----AKLLDMGXXXXXXXXXXXXXXXXXXXNVKGLQNDDRSLQNEATLEKDRCPLLFKF 231
                   L   G                     KG Q  D   + E TL++D  PLLFKF
Sbjct: 894  NSAPGVNLKSSGVRKNPSLGSSSFFDRFRKPGSKGSQTTDSIDKKEITLQRDLRPLLFKF 953

Query: 230  NEGFTNAVKRPVRIREFL 177
            NEGFTNA+KRPVR+R+FL
Sbjct: 954  NEGFTNAIKRPVRVRDFL 971


>ref|NP_171966.2| chromosome transmission fidelity protein 18 [Arabidopsis thaliana]
            gi|332189616|gb|AEE27737.1| chromosome transmission
            fidelity protein 18 [Arabidopsis thaliana]
          Length = 943

 Score =  102 bits (253), Expect = 1e-19
 Identities = 72/187 (38%), Positives = 91/187 (48%)
 Frame = -2

Query: 737  SLVPPISDYINFKDYTSNHYVLSLAMKQVLVHEVEKHKILQANVKTEALANGGHEVVEAA 558
            +L P + D+INFK +   H+VL+LAMKQVLVHEVEK KILQA+        GG    ++ 
Sbjct: 781  ALDPHLFDFINFKGHQFKHHVLALAMKQVLVHEVEKQKILQAS--------GG----KSG 828

Query: 557  TNNVPLANTNNHTAAADMKAMKNQANVLARQSNANPKTVSPNLNPTKSANATDNAKLLDM 378
              N P     N   A    A  N++        + P +VS     T   N++D  K    
Sbjct: 829  ILNKPEIKKINQDLAKKTNAAANESQ--RTPVTSKPPSVSVGTATTSKPNSSDVKKASRN 886

Query: 377  GXXXXXXXXXXXXXXXXXXXNVKGLQNDDRSLQNEATLEKDRCPLLFKFNEGFTNAVKRP 198
                                       D   +QN AT ++D  PLLFKFNEGFTNAVKRP
Sbjct: 887  ALNFFDRFRKSRKDY-----------EDPEDVQNRATAKRDSRPLLFKFNEGFTNAVKRP 935

Query: 197  VRIREFL 177
            VR+REFL
Sbjct: 936  VRMREFL 942


>tpg|DAA44535.1| TPA: hypothetical protein ZEAMMB73_048051 [Zea mays]
          Length = 944

 Score =  100 bits (248), Expect = 4e-19
 Identities = 72/195 (36%), Positives = 102/195 (52%), Gaps = 8/195 (4%)
 Frame = -2

Query: 737  SLVPPISDYINFKDYTSNHYVLSLAMKQVLVHEVEKHKILQANV-KTEALANGGHEVVEA 561
            SL PPI+D INF+ Y S H  LSLAMKQVLVHEVEK KI++ +  K    +N G+   EA
Sbjct: 770  SLYPPINDVINFEGYQSEHIGLSLAMKQVLVHEVEKQKIIKDSAGKLLNQSNDGNMKSEA 829

Query: 560  AT--NNVPLANTNNHTAAADMKAMKNQANVLARQSNA-----NPKTVSPNLNPTKSANAT 402
             +      +AN+      +   + K  ++ L  QSN+     +  ++S   + +++AN  
Sbjct: 830  LSTIRKKTVANSIRPALHSSKDSSKCNSSTLEMQSNSASIVNDNDSISAKKHSSRAANFF 889

Query: 401  DNAKLLDMGXXXXXXXXXXXXXXXXXXXNVKGLQNDDRSLQNEATLEKDRCPLLFKFNEG 222
            D  +                         V    + D  LQ  ATL++D  PL+FK+NEG
Sbjct: 890  DRFR---------------------KERPVDAKTHSDVGLQ-RATLQRDSRPLIFKYNEG 927

Query: 221  FTNAVKRPVRIREFL 177
            FTNAVKRPVR+R+ L
Sbjct: 928  FTNAVKRPVRVRDLL 942


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