BLASTX nr result

ID: Glycyrrhiza23_contig00026019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026019
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   286   2e-75
ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic ...   280   7e-74
ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [...   272   2e-71
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   270   9e-71
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ...   268   3e-70

>ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
            subunit A-like [Glycine max]
          Length = 2205

 Score =  286 bits (731), Expect = 2e-75
 Identities = 137/155 (88%), Positives = 144/155 (92%)
 Frame = +2

Query: 5    FPCLSIPSNARDSQYQILGWQQVAAKIGMQRCAASVQWLHERIALSRYAHVPLGNFELDW 184
            FPCLS+P NARDSQYQILGWQQVAAK+ MQRCAASVQWL++RIALSRYAHVPLGNFELDW
Sbjct: 1584 FPCLSVPYNARDSQYQILGWQQVAAKLXMQRCAASVQWLNQRIALSRYAHVPLGNFELDW 1643

Query: 185  LIFTADTFFSRALCDNQQVLWISDDGLPDLGGINGEENCFVDEVHQPVLTYPGAYRKVTV 364
            LIF AD FFSRAL DNQQVLWISDDGLPDLGGINGE+NCFVDEV QPVLTYPGAYR VTV
Sbjct: 1644 LIFIADIFFSRALHDNQQVLWISDDGLPDLGGINGEQNCFVDEVQQPVLTYPGAYRNVTV 1703

Query: 365  ELKIHHLAVDALLKCNQVNEMEGGSLLGFDHEFDS 469
            ELKIHHLAV+ALLK N VNEMEGG+LLGF HE DS
Sbjct: 1704 ELKIHHLAVNALLKYNLVNEMEGGTLLGFGHELDS 1738


>ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
            max]
          Length = 2207

 Score =  280 bits (717), Expect = 7e-74
 Identities = 135/155 (87%), Positives = 141/155 (90%)
 Frame = +2

Query: 5    FPCLSIPSNARDSQYQILGWQQVAAKIGMQRCAASVQWLHERIALSRYAHVPLGNFELDW 184
            FPCLS+P NARDSQYQILGWQQVAAK GMQRCAASVQWL++RIALSRYAHVPLGNFELDW
Sbjct: 1586 FPCLSVPYNARDSQYQILGWQQVAAKTGMQRCAASVQWLNQRIALSRYAHVPLGNFELDW 1645

Query: 185  LIFTADTFFSRALCDNQQVLWISDDGLPDLGGINGEENCFVDEVHQPVLTYPGAYRKVTV 364
            LIF AD FFSRAL DNQQVLWISDDGLPDLGGIN E+NCFVDEV QP LTYPGAYR VTV
Sbjct: 1646 LIFIADIFFSRALHDNQQVLWISDDGLPDLGGINSEQNCFVDEVQQPALTYPGAYRNVTV 1705

Query: 365  ELKIHHLAVDALLKCNQVNEMEGGSLLGFDHEFDS 469
            ELKIHHLAV+ALLK N VNEMEGG+LL F HE DS
Sbjct: 1706 ELKIHHLAVNALLKYNLVNEMEGGTLLRFGHELDS 1740


>ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
            gi|355507282|gb|AES88424.1| DNA polymerase epsilon
            catalytic subunit A [Medicago truncatula]
          Length = 2248

 Score =  272 bits (696), Expect = 2e-71
 Identities = 132/168 (78%), Positives = 142/168 (84%), Gaps = 13/168 (7%)
 Frame = +2

Query: 5    FPCLSIPSNARDSQYQ-------------ILGWQQVAAKIGMQRCAASVQWLHERIALSR 145
            FPCLSIP NARDSQY              ILGWQQ+AAK+GMQRCAASVQWL+E+IALSR
Sbjct: 1606 FPCLSIPFNARDSQYPVKCSETAGPYCLFILGWQQMAAKLGMQRCAASVQWLNEKIALSR 1665

Query: 146  YAHVPLGNFELDWLIFTADTFFSRALCDNQQVLWISDDGLPDLGGINGEENCFVDEVHQP 325
            YAHVPLGN E DWL+FT DTFF RAL DNQQVLWISDDG PDLGG  GEENCF+DEV QP
Sbjct: 1666 YAHVPLGNMEFDWLMFTVDTFFCRALRDNQQVLWISDDGFPDLGGNIGEENCFLDEVRQP 1725

Query: 326  VLTYPGAYRKVTVELKIHHLAVDALLKCNQVNEMEGGSLLGFDHEFDS 469
            V T+PGAYRK++VELKIHHLAVDALLKCNQVNEMEGG+LLGF HEFDS
Sbjct: 1726 VCTFPGAYRKISVELKIHHLAVDALLKCNQVNEMEGGALLGFGHEFDS 1773


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  270 bits (690), Expect = 9e-71
 Identities = 128/155 (82%), Positives = 140/155 (90%)
 Frame = +2

Query: 5    FPCLSIPSNARDSQYQILGWQQVAAKIGMQRCAASVQWLHERIALSRYAHVPLGNFELDW 184
            FPC+SIPSNARDSQYQ+LGWQQ +AKIGMQR AAS QWL+ERI+LSRYAHVPLGNFELDW
Sbjct: 1590 FPCVSIPSNARDSQYQVLGWQQASAKIGMQRSAASSQWLNERISLSRYAHVPLGNFELDW 1649

Query: 185  LIFTADTFFSRALCDNQQVLWISDDGLPDLGGINGEENCFVDEVHQPVLTYPGAYRKVTV 364
            LIFTAD FFSRAL D QQVLWISDDG+PDLGG + E  CF DEV QPVLTYPGAYRKV+V
Sbjct: 1650 LIFTADVFFSRALHDQQQVLWISDDGVPDLGGNHEESTCFADEVQQPVLTYPGAYRKVSV 1709

Query: 365  ELKIHHLAVDALLKCNQVNEMEGGSLLGFDHEFDS 469
            ELKIHHLAVDALLK NQ+NEMEGG+LLGFD + +S
Sbjct: 1710 ELKIHHLAVDALLKSNQINEMEGGALLGFDQDMNS 1744


>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
            [Cucumis sativus]
          Length = 2051

 Score =  268 bits (685), Expect = 3e-70
 Identities = 125/152 (82%), Positives = 140/152 (92%)
 Frame = +2

Query: 5    FPCLSIPSNARDSQYQILGWQQVAAKIGMQRCAASVQWLHERIALSRYAHVPLGNFELDW 184
            FPC++IPSNARD+QYQ+LGWQQ AAKIGMQRCAAS QWL+ERI+L+RYAHVPLGNFELDW
Sbjct: 1588 FPCVTIPSNARDNQYQVLGWQQTAAKIGMQRCAASSQWLNERISLARYAHVPLGNFELDW 1647

Query: 185  LIFTADTFFSRALCDNQQVLWISDDGLPDLGGINGEENCFVDEVHQPVLTYPGAYRKVTV 364
            LIFTAD FFSRAL D QQVLWISDDG+PD+GGIN E+ CF DEV QP+LTYPGAYRKV+V
Sbjct: 1648 LIFTADIFFSRALHDQQQVLWISDDGVPDIGGINIEDVCFADEVQQPILTYPGAYRKVSV 1707

Query: 365  ELKIHHLAVDALLKCNQVNEMEGGSLLGFDHE 460
            ELKIHHLAV+ALLK NQVNEMEGGSL GF+ +
Sbjct: 1708 ELKIHHLAVNALLKSNQVNEMEGGSLFGFERD 1739


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