BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026008
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ...   124   8e-27
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab...    62   4e-08
ref|NP_173402.2| pentatricopeptide repeat-containing protein [Ar...    59   5e-07

>ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Glycine max]
          Length = 945

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/89 (70%), Positives = 76/89 (85%)
 Frame = +2

Query: 140 PSKSRPLLSIPSYSATQFDCIGSTKVFANSNNVSMTKRSNLKLMDAQLNQLCINGSLSEA 319
           PSK    L IPS+S+TQ +  GST+  ANSN+VSMT+RS+ KL+D QLNQLC NGSLSEA
Sbjct: 9   PSKPWHPLLIPSHSSTQLEWHGSTRALANSNSVSMTQRSHPKLVDTQLNQLCANGSLSEA 68

Query: 320 VAILDSMAEQGSKVRPITYMNLLQSCIDR 406
           VAILDS+A+QGSKVRPIT+MNLLQ+CID+
Sbjct: 69  VAILDSLAQQGSKVRPITFMNLLQACIDK 97


>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355517031|gb|AES98654.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  124 bits (311), Expect = 8e-27
 Identities = 65/94 (69%), Positives = 76/94 (80%)
 Frame = +2

Query: 125 IHVNTPSKSRPLLSIPSYSATQFDCIGSTKVFANSNNVSMTKRSNLKLMDAQLNQLCING 304
           IH+  P+KS   LS P+   T+FDCI S +V ANSNNVS TK S  KL+D+QLNQLCING
Sbjct: 4   IHIFIPNKSITPLSFPN-KPTKFDCISSKRVNANSNNVSTTKPSIRKLIDSQLNQLCING 62

Query: 305 SLSEAVAILDSMAEQGSKVRPITYMNLLQSCIDR 406
           SLSEAV ILDS+AEQG +V+PITYMNLLQSCID+
Sbjct: 63  SLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDK 96


>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
 Frame = +2

Query: 140 PSKSRPLLSIPSYSATQFDC---IGSTKVFANSNNVSMTKRSNLKLMDAQLNQLCINGSL 310
           P KSRP L+ PS   T F+C   I   +V     +  +T +   K+ DA LN LC NG L
Sbjct: 7   PCKSRPPLATPSKQGTSFECSSRIIQPRVSFTKIHQPLTPKLKPKVTDAHLNHLCKNGRL 66

Query: 311 SEAVAILDSMAEQGSKVRPITYMNLLQSCIDR 406
           ++A+A LD++A+ GS V+P TYM LLQSCID+
Sbjct: 67  ADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQ 98


>ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
           lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein
           ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata]
          Length = 1490

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = +2

Query: 221 ANSNNVSMTKRSNLKLM-DAQLNQLCINGSLSEAVAILDSMAEQGSKVRPITYMNLLQSC 397
           +   N+S TK+    ++ D QL+ LC NGSL EA   LDS+ +QGSKV+  TY+NLL+SC
Sbjct: 32  SRKKNLSFTKKKEPNIIPDEQLDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLNLLESC 91

Query: 398 ID 403
           ID
Sbjct: 92  ID 93


>ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g19720; AltName: Full=Protein DYW7
           gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein
           [Arabidopsis thaliana] gi|332191770|gb|AEE29891.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 894

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = +2

Query: 221 ANSNNVSMTKRSNLKLM-DAQLNQLCINGSLSEAVAILDSMAEQGSKVRPITYMNLLQSC 397
           +   N+S TK+    ++ D Q + LC NGSL EA   LDS+ +QGSKV+  TY+ LL+SC
Sbjct: 32  SRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESC 91

Query: 398 ID 403
           ID
Sbjct: 92  ID 93