BLASTX nr result

ID: Glycyrrhiza23_contig00026006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00026006
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   543   e-152
ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   543   e-152
ref|XP_003617524.1| ATP-dependent RNA helicase DBP4 [Medicago tr...   493   e-137
ref|XP_004164669.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   483   e-134
ref|XP_004152924.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   483   e-134

>ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine max]
          Length = 743

 Score =  543 bits (1399), Expect = e-152
 Identities = 276/300 (92%), Positives = 285/300 (95%)
 Frame = +2

Query: 158  MRRPKSKEFRKQQRVSEEEEIKLLESWIQCQKPESGSNPMSLPPLRKNDPVGRLNDDNTF 337
            MRRPKSKEFRKQQRVSEEEEI LL SWIQ Q P+SGSNPMSLP L KN PVGRL +DNT+
Sbjct: 1    MRRPKSKEFRKQQRVSEEEEINLLNSWIQFQPPDSGSNPMSLPRLPKNSPVGRL-EDNTY 59

Query: 338  SRYAGAVRFDHLPLSKKTKDGLRGSKFVSMTDIQRASLPHALCGRDILGAAKTGSGKTLA 517
            SRYAGA RFD  PLSKKTKD LR SKFV+MTDIQRASLPHALCGRDILGAAKTGSGKTLA
Sbjct: 60   SRYAGASRFDQFPLSKKTKDALRESKFVAMTDIQRASLPHALCGRDILGAAKTGSGKTLA 119

Query: 518  FILPVLEKLYRERWGPEDGVGSIIISPTRELAGQLFDVLKSVGKHHGFSAGLLIGGRKDV 697
            FI+PVLEKLYRERWGPEDGVGSIIISPTRELAGQLFDVLK VGKHH FSAGLLIGGRKDV
Sbjct: 120  FIIPVLEKLYRERWGPEDGVGSIIISPTRELAGQLFDVLKVVGKHHNFSAGLLIGGRKDV 179

Query: 698  DMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLILDEADRILDSGFKKELNAIIS 877
            DMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVL+LDEADRILDSGFKKELNAIIS
Sbjct: 180  DMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIIS 239

Query: 878  QLPKRRQTLLFSATQTKSIQDLARLSLKDPEYISVHEESVTATPTLLKQIVMVVPLEQKL 1057
            QLPKRRQTLLFSATQTKSIQDLARLSLKDPEY+SVHEESVT+TPTLLKQIVM+VPLEQKL
Sbjct: 240  QLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTSTPTLLKQIVMIVPLEQKL 299


>ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine max]
          Length = 746

 Score =  543 bits (1399), Expect = e-152
 Identities = 273/300 (91%), Positives = 285/300 (95%)
 Frame = +2

Query: 158  MRRPKSKEFRKQQRVSEEEEIKLLESWIQCQKPESGSNPMSLPPLRKNDPVGRLNDDNTF 337
            MRRPKS+EFRKQQRVSEEEEI LL SWIQ Q P+SGSNPMSLPPL KN PVGRL+DD+T+
Sbjct: 1    MRRPKSREFRKQQRVSEEEEINLLNSWIQFQPPDSGSNPMSLPPLPKNSPVGRLDDDDTY 60

Query: 338  SRYAGAVRFDHLPLSKKTKDGLRGSKFVSMTDIQRASLPHALCGRDILGAAKTGSGKTLA 517
            SRYAGA RF+  PLSKKTKD LR SKFV MTDIQRASLPHALCGRDILGAAKTGSGKTLA
Sbjct: 61   SRYAGASRFEQFPLSKKTKDALRESKFVVMTDIQRASLPHALCGRDILGAAKTGSGKTLA 120

Query: 518  FILPVLEKLYRERWGPEDGVGSIIISPTRELAGQLFDVLKSVGKHHGFSAGLLIGGRKDV 697
            FI+PVLEKL+RERWGPEDGVGSIIISPTRELA QLFDVLK VGKHH FSAGLLIGGRKDV
Sbjct: 121  FIIPVLEKLHRERWGPEDGVGSIIISPTRELAAQLFDVLKVVGKHHNFSAGLLIGGRKDV 180

Query: 698  DMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLILDEADRILDSGFKKELNAIIS 877
            DMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVL+LDEADRILDSGFKKELNAIIS
Sbjct: 181  DMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIIS 240

Query: 878  QLPKRRQTLLFSATQTKSIQDLARLSLKDPEYISVHEESVTATPTLLKQIVMVVPLEQKL 1057
            QLPKRRQTLLFSATQTKSIQDLARLSLKDPEY+SVHEESVT+TPTLLKQIVM+VPLEQKL
Sbjct: 241  QLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTSTPTLLKQIVMIVPLEQKL 300


>ref|XP_003617524.1| ATP-dependent RNA helicase DBP4 [Medicago truncatula]
            gi|355518859|gb|AET00483.1| ATP-dependent RNA helicase
            DBP4 [Medicago truncatula]
          Length = 747

 Score =  493 bits (1270), Expect = e-137
 Identities = 255/309 (82%), Positives = 276/309 (89%), Gaps = 9/309 (2%)
 Frame = +2

Query: 158  MRRPK-SKEFRKQQRVSEEEEIKLLESWIQCQKPESGSNPMSLPPLRKNDPVGRLNDDNT 334
            MR+PK SK+FRKQQR SE ++I LL SWIQ QKP+SGSNPMSLPPL KN PVGRL D  T
Sbjct: 1    MRKPKPSKQFRKQQRDSELDKINLLNSWIQSQKPDSGSNPMSLPPLPKNSPVGRLAD-GT 59

Query: 335  FSRYAGAVRFDHLPLSKKTKDGLRG--------SKFVSMTDIQRASLPHALCGRDILGAA 490
            FSRYAG VRFD LP+SKKTKDGL          SKFVSMT IQRASLPHALCGRD+LGAA
Sbjct: 60   FSRYAGVVRFDQLPISKKTKDGLISKKTQDELHSKFVSMTKIQRASLPHALCGRDVLGAA 119

Query: 491  KTGSGKTLAFILPVLEKLYRERWGPEDGVGSIIISPTRELAGQLFDVLKSVGKHHGFSAG 670
            KTGSGKTLAFI+PVLEKL+RERWG EDGVGSIIISPTRELAGQ+F VL ++G+HH FSAG
Sbjct: 120  KTGSGKTLAFIIPVLEKLHRERWGTEDGVGSIIISPTRELAGQIFGVLNAIGEHHRFSAG 179

Query: 671  LLIGGRKDVDMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLILDEADRILDSGF 850
            LLIGG  DV +EKE VN+LNILICTPGRLLQHMDETPNFDCSQMQVL+LDEADRILDSGF
Sbjct: 180  LLIGGGGDVAIEKECVNKLNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGF 239

Query: 851  KKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYISVHEESVTATPTLLKQIV 1030
            KKE+NAIISQLPKRRQT+LFSATQTKS+QDLARLSLKDPEYISVHEESVTATPTLLKQ V
Sbjct: 240  KKEVNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEYISVHEESVTATPTLLKQTV 299

Query: 1031 MVVPLEQKL 1057
            M+VPL+QKL
Sbjct: 300  MIVPLDQKL 308


>ref|XP_004164669.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Cucumis
            sativus]
          Length = 734

 Score =  483 bits (1244), Expect = e-134
 Identities = 241/296 (81%), Positives = 264/296 (89%)
 Frame = +2

Query: 170  KSKEFRKQQRVSEEEEIKLLESWIQCQKPESGSNPMSLPPLRKNDPVGRLNDDNTFSRYA 349
            KSK   KQ+R+SE EEIKLL SWI+ QKP+SGSNPMSLPP   N P+GR++DD T+SRYA
Sbjct: 6    KSKNSGKQKRLSENEEIKLLNSWIESQKPDSGSNPMSLPPPPPNAPIGRIDDD-TYSRYA 64

Query: 350  GAVRFDHLPLSKKTKDGLRGSKFVSMTDIQRASLPHALCGRDILGAAKTGSGKTLAFILP 529
            GA RFD LP+S KTKDGLR ++F+ MTDIQ+ASLPHALCGRDILGAAKTGSGKTLAF++P
Sbjct: 65   GATRFDQLPISSKTKDGLRKAEFIDMTDIQKASLPHALCGRDILGAAKTGSGKTLAFLIP 124

Query: 530  VLEKLYRERWGPEDGVGSIIISPTRELAGQLFDVLKSVGKHHGFSAGLLIGGRKDVDMEK 709
            VLEKLYRERWGPE GVGSIIISPTREL  QLFDVLK+VGK H FSAGLLIGGRKDV+ EK
Sbjct: 125  VLEKLYRERWGPEFGVGSIIISPTRELGAQLFDVLKAVGKFHNFSAGLLIGGRKDVNTEK 184

Query: 710  ERVNELNILICTPGRLLQHMDETPNFDCSQMQVLILDEADRILDSGFKKELNAIISQLPK 889
            E VNELNIL+CTPGRLLQHMDETPNFDCSQ+QVL+LDEADRILD GFKK LNAIISQLPK
Sbjct: 185  EHVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIISQLPK 244

Query: 890  RRQTLLFSATQTKSIQDLARLSLKDPEYISVHEESVTATPTLLKQIVMVVPLEQKL 1057
             RQT LFSATQTKS+QDLARLSLKDPEY+SVHEES TATP  L+Q  MVVPLEQKL
Sbjct: 245  HRQTFLFSATQTKSVQDLARLSLKDPEYLSVHEESTTATPNSLQQTAMVVPLEQKL 300


>ref|XP_004152924.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Cucumis
            sativus]
          Length = 734

 Score =  483 bits (1244), Expect = e-134
 Identities = 241/296 (81%), Positives = 264/296 (89%)
 Frame = +2

Query: 170  KSKEFRKQQRVSEEEEIKLLESWIQCQKPESGSNPMSLPPLRKNDPVGRLNDDNTFSRYA 349
            KSK   KQ+R+SE EEIKLL SWI+ QKP+SGSNPMSLPP   N P+GR++DD T+SRYA
Sbjct: 6    KSKNSGKQKRLSENEEIKLLNSWIESQKPDSGSNPMSLPPPLPNAPIGRIDDD-TYSRYA 64

Query: 350  GAVRFDHLPLSKKTKDGLRGSKFVSMTDIQRASLPHALCGRDILGAAKTGSGKTLAFILP 529
            GA RFD LP+S KTKDGLR ++F+ MTDIQ+ASLPHALCGRDILGAAKTGSGKTLAF++P
Sbjct: 65   GATRFDQLPISSKTKDGLRKAEFIDMTDIQKASLPHALCGRDILGAAKTGSGKTLAFLIP 124

Query: 530  VLEKLYRERWGPEDGVGSIIISPTRELAGQLFDVLKSVGKHHGFSAGLLIGGRKDVDMEK 709
            VLEKLYRERWGPE GVGSIIISPTREL  QLFDVLK+VGK H FSAGLLIGGRKDV+ EK
Sbjct: 125  VLEKLYRERWGPEFGVGSIIISPTRELGAQLFDVLKAVGKFHNFSAGLLIGGRKDVNTEK 184

Query: 710  ERVNELNILICTPGRLLQHMDETPNFDCSQMQVLILDEADRILDSGFKKELNAIISQLPK 889
            E VNELNIL+CTPGRLLQHMDETPNFDCSQ+QVL+LDEADRILD GFKK LNAIISQLPK
Sbjct: 185  EHVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIISQLPK 244

Query: 890  RRQTLLFSATQTKSIQDLARLSLKDPEYISVHEESVTATPTLLKQIVMVVPLEQKL 1057
             RQT LFSATQTKS+QDLARLSLKDPEY+SVHEES TATP  L+Q  MVVPLEQKL
Sbjct: 245  HRQTFLFSATQTKSVQDLARLSLKDPEYLSVHEESTTATPNSLQQTAMVVPLEQKL 300


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