BLASTX nr result
ID: Glycyrrhiza23_contig00025996
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00025996
(647 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD33309.1| Ribonuclease H [Medicago truncatula] 291 5e-77
ref|XP_003625075.1| TMV resistance protein N [Medicago truncatul... 291 5e-77
gb|ABH07384.1| CMR1 [Phaseolus vulgaris] 159 6e-37
ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Gl... 158 7e-37
ref|XP_003622506.1| TMV resistance protein N [Medicago truncatul... 154 1e-35
>gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
Length = 1378
Score = 291 bits (746), Expect = 5e-77
Identities = 150/215 (69%), Positives = 164/215 (76%)
Frame = +1
Query: 1 SMLALDQTSIAELPPTVGYLTGLNSLLLRDCKNIVSLPNTFSNLKSLRRLNVSGCSKFSK 180
S LALD+ +AELPPT+GYLTGLNSLLLRDCKNI SLP+TFS LKSL+RLN+SGCSKFSK
Sbjct: 584 STLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSKFSK 643
Query: 181 LPDXXXXXXXXXXXXVSETAIREVPSSIVHLKNLTLLLFHGCKGLTLNSQSSLLPFNRIF 360
LPD VS TAIREVPSSIVHLKNL LLFHGCKGL NS+SSLLP RIF
Sbjct: 644 LPDNLHENEALECLNVSNTAIREVPSSIVHLKNLISLLFHGCKGLARNSESSLLPLGRIF 703
Query: 361 GFSSHPIQKKLIXXXXXXXXXXXXXXXXHCNLLDGSIPDDLGCLSSLVTLDMSGNNFVHL 540
GF +HP KKLI +CNL D SIPDDLGCLSSLVTLD+SGNNFV+L
Sbjct: 704 GFGTHPTPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLDISGNNFVNL 763
Query: 541 PAGCISELLKLERLVLRCCPSLQSLPKLPPNVHYV 645
GCIS+LLKLERLVL C +LQSLP LPPNVH+V
Sbjct: 764 RDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFV 798
Score = 58.5 bits (140), Expect = 1e-06
Identities = 31/97 (31%), Positives = 51/97 (52%)
Frame = +1
Query: 25 SIAELPPTVGYLTGLNSLLLRDCKNIVSLPNTFSNLKSLRRLNVSGCSKFSKLPDXXXXX 204
++ E+ ++G L ++ + L DCKN+ SLP + SL+RL ++GC+ KLPD
Sbjct: 522 NLVEVHASLGLLKKISYVTLEDCKNLKSLPGKLE-MNSLKRLILTGCTSVRKLPDFGESM 580
Query: 205 XXXXXXXVSETAIREVPSSIVHLKNLTLLLFHGCKGL 315
+ E + E+P +I +L L LL CK +
Sbjct: 581 TNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNI 617
>ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
gi|355500090|gb|AES81293.1| TMV resistance protein N
[Medicago truncatula]
Length = 1579
Score = 291 bits (746), Expect = 5e-77
Identities = 150/215 (69%), Positives = 164/215 (76%)
Frame = +1
Query: 1 SMLALDQTSIAELPPTVGYLTGLNSLLLRDCKNIVSLPNTFSNLKSLRRLNVSGCSKFSK 180
S LALD+ +AELPPT+GYLTGLNSLLLRDCKNI SLP+TFS LKSL+RLN+SGCSKFSK
Sbjct: 767 STLALDEIPLAELPPTIGYLTGLNSLLLRDCKNIYSLPDTFSKLKSLKRLNLSGCSKFSK 826
Query: 181 LPDXXXXXXXXXXXXVSETAIREVPSSIVHLKNLTLLLFHGCKGLTLNSQSSLLPFNRIF 360
LPD VS TAIREVPSSIVHLKNL LLFHGCKGL NS+SSLLP RIF
Sbjct: 827 LPDNLHENEALECLNVSNTAIREVPSSIVHLKNLISLLFHGCKGLARNSESSLLPLGRIF 886
Query: 361 GFSSHPIQKKLIXXXXXXXXXXXXXXXXHCNLLDGSIPDDLGCLSSLVTLDMSGNNFVHL 540
GF +HP KKLI +CNL D SIPDDLGCLSSLVTLD+SGNNFV+L
Sbjct: 887 GFGTHPTPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLDISGNNFVNL 946
Query: 541 PAGCISELLKLERLVLRCCPSLQSLPKLPPNVHYV 645
GCIS+LLKLERLVL C +LQSLP LPPNVH+V
Sbjct: 947 RDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFV 981
Score = 58.5 bits (140), Expect = 1e-06
Identities = 31/97 (31%), Positives = 51/97 (52%)
Frame = +1
Query: 25 SIAELPPTVGYLTGLNSLLLRDCKNIVSLPNTFSNLKSLRRLNVSGCSKFSKLPDXXXXX 204
++ E+ ++G L ++ + L DCKN+ SLP + SL+RL ++GC+ KLPD
Sbjct: 705 NLVEVHASLGLLKKISYVTLEDCKNLKSLPGKLE-MNSLKRLILTGCTSVRKLPDFGESM 763
Query: 205 XXXXXXXVSETAIREVPSSIVHLKNLTLLLFHGCKGL 315
+ E + E+P +I +L L LL CK +
Sbjct: 764 TNLSTLALDEIPLAELPPTIGYLTGLNSLLLRDCKNI 800
>gb|ABH07384.1| CMR1 [Phaseolus vulgaris]
Length = 1133
Score = 159 bits (401), Expect = 6e-37
Identities = 94/213 (44%), Positives = 127/213 (59%), Gaps = 1/213 (0%)
Frame = +1
Query: 1 SMLALDQTSIAELPPTVGYLTGLNSLLLRDCKNIVSLPNTFSNLKSLRRLNVSGCSKFSK 180
S+L L+ T+I +LP ++G L GL+ L ++CKN+V LP+T L+SL LNVSGCSK S
Sbjct: 723 SVLCLEGTAITKLPTSLGCLIGLSHLDTKNCKNLVCLPDTIHKLRSLIVLNVSGCSKLSS 782
Query: 181 LPDXXXXXXXXXXXXVSETAIREVPSSIVHLKNLTLLLFHGCKGLTLNSQSS-LLPFNRI 357
LP+ SETAI+E+PS + +L+NL + GCKG S +S LPF R+
Sbjct: 783 LPEGLKEIKCLEELDASETAIQELPSFVFYLENLRDISVAGCKGPVSKSVNSFFLPFKRL 842
Query: 358 FGFSSHPIQKKLIXXXXXXXXXXXXXXXXHCNLLDGSIPDDLGCLSSLVTLDMSGNNFVH 537
FG I +L +CNL + S P D LSSL+ L+++GNNFV
Sbjct: 843 FGNQQTSIGFRL-PPSALSLPSLKRINLSYCNLSEESFPGDFCSLSSLMILNLTGNNFVS 901
Query: 538 LPAGCISELLKLERLVLRCCPSLQSLPKLPPNV 636
LP+ CIS+L KLE L+L C LQ+LPKLP N+
Sbjct: 902 LPS-CISKLAKLEHLILNSCKKLQTLPKLPSNM 933
>ref|XP_003548449.1| PREDICTED: TMV resistance protein N-like [Glycine max]
Length = 1289
Score = 158 bits (400), Expect = 7e-37
Identities = 96/216 (44%), Positives = 127/216 (58%), Gaps = 1/216 (0%)
Frame = +1
Query: 1 SMLALDQTSIAELPPTVGYLTGLNSLLLRDCKNIVSLPNTFSNLKSLRRLNVSGCSKFSK 180
S+L+L+ T+IA+LP ++G L GL L L++CKN+V LP+TF NL SL LNVSGCSK
Sbjct: 722 SVLSLEGTAIAKLPSSLGCLVGLAHLYLKNCKNLVCLPDTFHNLNSLIVLNVSGCSKLGC 781
Query: 181 LPDXXXXXXXXXXXXVSETAIREVPSSIVHLKNLTLLLFHGCKGLTLNSQSS-LLPFNRI 357
LP+ S TAI+E+PSS+ +L+NL + F GCK NS S LLPF +
Sbjct: 782 LPEGLKEIKSLEELDASGTAIQELPSSVFYLENLKSISFAGCKKPVSNSVSGFLLPFQWV 841
Query: 358 FGFSSHPIQKKLIXXXXXXXXXXXXXXXXHCNLLDGSIPDDLGCLSSLVTLDMSGNNFVH 537
FG P +L +CNL + S PD LSSL LD++GNNFV
Sbjct: 842 FGNQQTPTAFRL-PPSKLNLPSLMRINLSYCNLSEESFPDGFRHLSSLQFLDLTGNNFVT 900
Query: 538 LPAGCISELLKLERLVLRCCPSLQSLPKLPPNVHYV 645
LP+ CIS L KLE L+L C L+ LP+LP + ++
Sbjct: 901 LPS-CISNLTKLEILLLNLCKKLKRLPELPSRMKHL 935
Score = 59.7 bits (143), Expect = 5e-07
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 5/180 (2%)
Frame = +1
Query: 22 TSIAELPPTVGYLTGLNSLLLRDCKNIVSLPNTFSNLKSLRRLNVSGCSKFSKLPDXXXX 201
TS+ E+ P++ L + L+DCK + +LP+ + SL+ LN+SGCS+F LP+
Sbjct: 659 TSLTEVHPSLVRHKKLAMMNLKDCKRLKTLPSKME-MSSLKDLNLSGCSEFKYLPEFGES 717
Query: 202 XXXXXXXXVSETAIREVPSSIVHLKNLTLLLFHGCKGL-----TLNSQSSLLPFNRIFGF 366
+ TAI ++PSS+ L L L CK L T ++ +SL+ N
Sbjct: 718 MEHLSVLSLEGTAIAKLPSSLGCLVGLAHLYLKNCKNLVCLPDTFHNLNSLIVLN----- 772
Query: 367 SSHPIQKKLIXXXXXXXXXXXXXXXXHCNLLDGSIPDDLGCLSSLVTLDMSGNNFVHLPA 546
C+ L G +P+ L + SL LD SG LP+
Sbjct: 773 ------------------------VSGCSKL-GCLPEGLKEIKSLEELDASGTAIQELPS 807
>ref|XP_003622506.1| TMV resistance protein N [Medicago truncatula]
gi|355497521|gb|AES78724.1| TMV resistance protein N
[Medicago truncatula]
Length = 1137
Score = 154 bits (389), Expect = 1e-35
Identities = 91/213 (42%), Positives = 123/213 (57%), Gaps = 1/213 (0%)
Frame = +1
Query: 1 SMLALDQTSIAELPPTVGYLTGLNSLLLRDCKNIVSLPNTFSNLKSLRRLNVSGCSKFSK 180
S L+L++T+I +LP ++G+L L SL L +CKN+V LPNT S LKSL LNVSGCSK
Sbjct: 729 SKLSLEETAIKKLPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLILNVSGCSKLHS 788
Query: 181 LPDXXXXXXXXXXXXVSETAIREVPSSIVHLKNLTLLLFHGCKG-LTLNSQSSLLPFNRI 357
P+ +ET+I E+PSS+ L+NL ++ F GCKG +T + + LLPF +
Sbjct: 789 FPEGLKEMKSLEELFANETSIEELPSSVFFLENLKVISFAGCKGPVTKSVNTFLLPFTQF 848
Query: 358 FGFSSHPIQKKLIXXXXXXXXXXXXXXXXHCNLLDGSIPDDLGCLSSLVTLDMSGNNFVH 537
G P +L +CNL + S+P D LSSLV L++SGNNFV
Sbjct: 849 LGTPQEPNGFRL--PPKLCLPSLRNLNLSYCNLSEESMPKDFSNLSSLVVLNLSGNNFVR 906
Query: 538 LPAGCISELLKLERLVLRCCPSLQSLPKLPPNV 636
P IS+L KLE L L CC LQ P+ P ++
Sbjct: 907 -PPSSISKLPKLEYLRLNCCEMLQKFPEFPSSM 938
Score = 58.2 bits (139), Expect = 1e-06
Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Frame = +1
Query: 22 TSIAELPPTVGYLTGLNSLLLRDCKNIVSLPNTFSNLKSLRRLNVSGCSKFSKLPDXXXX 201
TS+ E+ P++ L L L+DCK + +LP + SL+ L++SGC +F LP+
Sbjct: 666 TSLTEIHPSLLSHKKLALLNLKDCKRLKTLPCKIE-MSSLKGLSLSGCCEFKHLPEFDET 724
Query: 202 XXXXXXXXVSETAIREVPSSIVHLKNLTLLLFHGCKGL-----TLNSQSSLLPFN 351
+ ETAI+++PSS+ L +L L CK L T++ SLL N
Sbjct: 725 MENLSKLSLEETAIKKLPSSLGFLVSLLSLDLENCKNLVCLPNTVSELKSLLILN 779